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CANCER GLIOMA Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
GBM TCGA GBM VALIDATION PROTEIN GBM CPTAC
Dictionary
Glioma
Human cancer
Glioblastoma multiforme
GLIOBLASTOMA MULTIFORME (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPLP1 is not prognostic in Glioblastoma Multiforme (TCGA)


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 2369.93
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
3-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
3-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 1887.1
Number of samples 141
Samples
Sample Description pTPM
TCGA-27-2521-01A 34 years, male, white, stage:'--, dead, 510 days 4259.2
TCGA-28-5218-01A 63 years, male, white, stage:'--, dead, 157 days 3796.8
TCGA-06-2569-01A 24 years, female, black or african american, stage:'--, alive, 13 days 3610.6
TCGA-14-0871-01A 74 years, female, white, stage:'--, dead, 880 days 3368.6
TCGA-12-5295-01A 60 years, female, white, stage:'--, dead, 454 days 3281.4
TCGA-26-5133-01A 59 years, male, white, stage:'--, alive, 452 days 3072.0
TCGA-02-0055-01A 62 years, female, white, stage:'--, dead, 76 days 2884.3
TCGA-06-0178-01A 38 years, male, white, stage:'--, dead, 2681 days 2867.8
TCGA-14-0817-01A 69 years, female, white, stage:'--, dead, 164 days 2812.7
TCGA-27-2526-01A 79 years, female, white, stage:'--, dead, 87 days 2798.8
TCGA-12-5299-01A 56 years, female, white, stage:'--, dead, 98 days 2777.2
TCGA-12-3653-01A 34 years, female, white, stage:'--, dead, 442 days 2767.2
TCGA-06-0744-01A 66 years, male, white, stage:'--, dead, 1426 days 2756.4
TCGA-06-5417-01A 45 years, female, white, stage:'--, alive, 155 days 2694.8
TCGA-12-3650-01A 46 years, male, white, stage:'--, dead, 333 days 2660.5
TCGA-14-1823-01A 58 years, female, white, stage:'--, dead, 543 days 2643.0
TCGA-28-2509-01A 77 years, female, white, stage:'--, alive, 145 days 2625.3
TCGA-27-1831-01A 66 years, male, white, stage:'--, dead, 505 days 2618.0
TCGA-14-2554-01A 52 years, female, white, stage:'--, dead, 532 days 2606.7
TCGA-12-3652-01A 60 years, male, white, stage:'--, dead, 1062 days 2570.7
TCGA-02-2483-01A 43 years, male, asian, stage:'--, alive, 466 days 2566.3
TCGA-06-2570-01A 21 years, female, white, stage:'--, alive, 958 days 2558.8
TCGA-06-0168-01A 59 years, female, white, stage:'--, dead, 598 days 2547.3
TCGA-41-2572-01A 67 years, male, white, stage:'--, dead, 406 days 2479.7
TCGA-06-5418-01A 75 years, female, white, stage:'--, dead, 83 days 2465.6
TCGA-06-0745-01A 59 years, male, white, stage:'--, dead, 239 days 2460.2
TCGA-19-5960-01A 56 years, male, white, stage:'--, dead, 455 days 2431.5
TCGA-12-0616-01A 36 years, female, white, stage:'--, dead, 448 days 2384.8
TCGA-06-0686-01A 53 years, male, white, stage:'--, dead, 432 days 2381.0
TCGA-06-0138-01A 43 years, male, white, stage:'--, dead, 737 days 2369.9
TCGA-06-0139-01A 40 years, male, white, stage:'--, dead, 362 days 2362.0
TCGA-14-0787-01A 69 years, male, asian, stage:'--, dead, 68 days 2256.6
TCGA-32-4213-01A 47 years, female, white, stage:'--, alive, 604 days 2234.2
TCGA-26-5135-01A 72 years, female, white, stage:'--, dead, 270 days 2226.1
TCGA-26-5132-01A 74 years, male, white, stage:'--, alive, 286 days 2204.8
TCGA-06-0156-01A 57 years, male, white, stage:'--, dead, 178 days 2194.1
TCGA-76-4925-01A 76 years, male, white, stage:'--, dead, 146 days 2180.6
TCGA-15-0742-01A 65 years, male, white, stage:'--, dead, 419 days 2156.6
TCGA-27-2524-01A 56 years, male, white, stage:'--, dead, 231 days 2123.9
TCGA-41-2571-01A 89 years, male, white, stage:'--, dead, 26 days 2116.4
TCGA-12-0821-01A 62 years, male, white, stage:'--, dead, 323 days 2092.9
TCGA-32-1982-01A 76 years, female, white, stage:'--, dead, 142 days 2092.8
TCGA-06-0130-01A 54 years, male, white, stage:'--, dead, 394 days 2090.8
TCGA-19-4065-01A 36 years, male, white, stage:'--, alive, 214 days 2088.6
TCGA-06-0749-01A 50 years, male, black or african american, stage:'--, dead, 82 days 2073.9
TCGA-02-2486-01A 64 years, male, white, stage:'--, dead, 618 days 2059.4
TCGA-28-5208-01A 52 years, male, white, stage:'--, dead, 544 days 2057.1
TCGA-02-2485-01A 53 years, male, black or african american, stage:'--, alive, 470 days 2050.5
TCGA-32-2615-01A 62 years, male, white, stage:'--, dead, 485 days 2030.3
TCGA-27-1832-01A 59 years, female, white, stage:'--, dead, 300 days 2008.4
TCGA-06-0211-01A 47 years, male, white, stage:'--, dead, 360 days 1992.5
TCGA-76-4932-01A 50 years, female, white, stage:'--, dead, 1458 days 1962.8
TCGA-76-4927-01A 58 years, male, white, stage:'--, dead, 535 days 1959.8
TCGA-06-0238-01A 46 years, male, white, stage:'--, dead, 405 days 1950.6
TCGA-28-5220-01A 67 years, male, white, stage:'--, dead, 388 days 1950.4
TCGA-28-2513-01A 69 years, female, white, stage:'--, alive, 222 days 1937.9
TCGA-41-3915-01A 48 years, male, white, stage:'--, dead, 360 days 1929.5
TCGA-76-4931-01A 70 years, female, white, stage:'--, dead, 279 days 1927.7
TCGA-06-5413-01A 67 years, male, white, stage:'--, alive, 268 days 1920.0
TCGA-06-0174-01A 54 years, male, white, stage:'--, dead, 98 days 1892.2
TCGA-32-2632-01A 80 years, male, white, stage:'--, dead, 269 days 1870.6
TCGA-14-1034-01A 60 years, female, stage:'--, dead, 485 days 1868.9
TCGA-26-5134-01A 74 years, male, white, stage:'--, alive, 167 days 1868.8
TCGA-06-0184-01A 63 years, male, white, stage:'--, dead, 2126 days 1864.3
TCGA-06-5410-01A 72 years, female, white, stage:'--, dead, 108 days 1861.2
TCGA-06-5408-01A 54 years, female, white, stage:'--, dead, 357 days 1855.5
TCGA-06-0747-01A 53 years, male, white, stage:'--, dead, 82 days 1843.0
TCGA-14-1829-01A 57 years, male, black or african american, stage:'--, alive, 218 days 1841.9
TCGA-14-1825-01A 70 years, male, white, stage:'--, dead, 232 days 1831.4
TCGA-27-2528-01A 62 years, male, white, stage:'--, dead, 480 days 1822.5
TCGA-32-5222-01A 66 years, male, white, stage:'--, dead, 585 days 1813.0
TCGA-06-0219-01A 67 years, male, white, stage:'--, dead, 22 days 1796.4
TCGA-19-2625-01A 76 years, female, white, stage:'--, dead, 124 days 1791.5
TCGA-06-2563-01A 72 years, female, white, stage:'--, alive, 932 days 1783.9
TCGA-06-0190-01A 62 years, male, white, stage:'--, dead, 317 days 1762.6
TCGA-19-2624-01A 51 years, male, white, stage:'--, dead, 5 days 1744.0
TCGA-26-1442-01A 43 years, male, white, stage:'--, alive, 953 days 1723.8
TCGA-28-1753-01A 53 years, male, white, stage:'--, alive, 37 days 1721.0
TCGA-06-2562-01A 81 years, male, white, stage:'--, dead, 382 days 1720.7
TCGA-06-2567-01A 65 years, male, white, stage:'--, dead, 133 days 1711.0
TCGA-16-0846-01A 85 years, male, white, stage:'--, dead, 119 days 1708.1
TCGA-14-0789-01A 54 years, male, white, stage:'--, dead, 342 days 1692.2
TCGA-28-5209-01A 66 years, female, white, stage:'--, alive, 442 days 1691.6
TCGA-06-5412-01A 78 years, female, white, stage:'--, dead, 138 days 1675.8
TCGA-06-0750-01A 43 years, male, white, stage:'--, dead, 28 days 1673.5
TCGA-06-0645-01A 55 years, female, white, stage:'--, dead, 175 days 1654.8
TCGA-27-1837-01A 36 years, male, white, stage:'--, dead, 427 days 1652.9
TCGA-06-5858-01A 45 years, female, white, stage:'--, alive, 187 days 1650.7
TCGA-28-5207-01A 71 years, male, white, stage:'--, dead, 343 days 1649.4
TCGA-32-2634-01A 82 years, male, white, stage:'--, alive, 693 days 1628.8
TCGA-28-5204-01A 72 years, male, white, stage:'--, dead, 454 days 1626.0
TCGA-06-2557-01A 76 years, male, black or african american, stage:'--, dead, 33 days 1624.5
TCGA-06-0210-01A 72 years, female, white, stage:'--, dead, 225 days 1622.1
TCGA-06-0743-01A 69 years, male, white, stage:'--, dead, 803 days 1605.0
TCGA-32-2638-01A 67 years, male, white, stage:'--, dead, 766 days 1603.7
TCGA-06-5414-01A 61 years, male, white, stage:'--, alive, 273 days 1594.9
TCGA-19-2629-01A 60 years, male, white, stage:'--, dead, 737 days 1589.4
TCGA-06-0132-01A 49 years, male, white, stage:'--, dead, 771 days 1580.4
TCGA-06-0158-01A 73 years, male, white, stage:'--, dead, 329 days 1576.6
TCGA-28-5216-01A 52 years, male, white, stage:'--, alive, 415 days 1563.1
TCGA-06-0644-01A 71 years, male, black or african american, stage:'--, dead, 384 days 1539.3
TCGA-06-0882-01A 30 years, male, white, stage:'--, dead, 632 days 1502.2
TCGA-06-5411-01A 51 years, male, white, stage:'--, dead, 254 days 1483.4
TCGA-06-5416-01A 23 years, female, white, stage:'--, alive, 204 days 1479.7
TCGA-19-2619-01A 55 years, female, black or african american, stage:'--, alive, 294 days 1461.0
TCGA-27-2523-01A 63 years, male, white, stage:'--, dead, 489 days 1444.2
TCGA-27-1830-01A 57 years, male, white, stage:'--, dead, 154 days 1427.6
TCGA-06-0878-01A 74 years, male, white, stage:'--, alive, 218 days 1425.3
TCGA-41-4097-01A 63 years, female, white, stage:'--, dead, 6 days 1423.4
TCGA-41-5651-01A 59 years, female, black or african american, stage:'--, dead, 460 days 1391.9
TCGA-06-2565-01A 59 years, male, asian, stage:'--, dead, 506 days 1374.5
TCGA-27-1835-01A 53 years, female, white, stage:'--, dead, 648 days 1373.9
TCGA-06-2559-01A 83 years, male, white, stage:'--, dead, 150 days 1373.4
TCGA-26-5139-01A 65 years, female, white, stage:'--, alive, 48 days 1373.0
TCGA-19-2620-01A 70 years, male, white, stage:'--, dead, 148 days 1353.1
TCGA-06-0187-01A 69 years, male, white, stage:'--, dead, 828 days 1348.7
TCGA-06-0125-01A 63 years, female, white, stage:'--, dead, 1448 days 1333.0
TCGA-06-0129-01A 30 years, male, asian, stage:'--, dead, 1024 days 1286.8
TCGA-06-5856-01A 58 years, male, white, stage:'--, dead, 114 days 1277.2
TCGA-08-0386-01A 74 years, male, white, stage:'--, dead, 548 days 1259.5
TCGA-06-0157-01A 63 years, female, white, stage:'--, dead, 97 days 1237.0
TCGA-28-2514-01A 45 years, male, asian, stage:'--, alive, 160 days 1232.3
TCGA-32-2616-01A 48 years, female, white, stage:'--, dead, 224 days 1232.0
TCGA-06-2558-01A 75 years, female, white, stage:'--, dead, 380 days 1221.4
TCGA-15-1444-01A 21 years, male, white, stage:'--, dead, 1537 days 1216.7
TCGA-32-1970-01A 59 years, male, white, stage:'--, dead, 468 days 1208.7
TCGA-28-5215-01A 62 years, female, white, stage:'--, dead, 335 days 1208.0
TCGA-32-1980-01A 72 years, male, white, stage:'--, dead, 36 days 1205.2
TCGA-06-2564-01A 50 years, male, white, stage:'--, alive, 181 days 1169.9
TCGA-06-2561-01A 53 years, female, white, stage:'--, dead, 537 days 1111.9
TCGA-06-5859-01A 63 years, male, white, stage:'--, alive, 139 days 1109.9
TCGA-76-4929-01A 76 years, female, white, stage:'--, dead, 111 days 1077.9
TCGA-06-0646-01A 60 years, male, white, stage:'--, dead, 175 days 1074.5
TCGA-19-1390-01A 63 years, female, white, stage:'--, dead, 772 days 1066.0
TCGA-27-2519-01A 48 years, male, white, stage:'--, dead, 550 days 1017.2
TCGA-27-1834-01A 56 years, male, white, stage:'--, dead, 1233 days 1014.4
TCGA-02-0047-01A 78 years, male, white, stage:'--, dead, 448 days 1009.4
TCGA-12-0619-01A 60 years, male, white, stage:'--, dead, 1062 days 997.1
TCGA-12-0618-01A 49 years, male, white, stage:'--, dead, 395 days 983.8
TCGA-06-0141-01A 62 years, male, white, stage:'--, dead, 313 days 977.0
TCGA-06-1804-01A 81 years, female, white, stage:'--, dead, 414 days 782.9
Show allShow less
GLIOBLASTOMA MULTIFORME (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPLP1 is not prognostic in Glioblastoma Multiforme (validation)


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 82.79
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
3-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
3-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 113.7
Number of samples 58
Samples
Sample Description pTPM
AK043 N, NA, stage:NA, alive, 660 days 341.1
AK133 N, NA, stage:NA, dead, 360 days 266.8
AK035 N, NA, stage:NA, dead, 210 days 222.1
AK134 N, NA, stage:NA, dead, 360 days 209.8
AK002 N, NA, stage:NA, dead, 570 days 209.4
AK006 N, NA, stage:NA, dead, 360 days 194.5
AK079 N, NA, stage:NA, dead, 210 days 193.6
AK117 N, NA, stage:NA, dead, 210 days 181.5
AK088 N, NA, stage:NA, dead, 360 days 169.5
AK005 N, NA, stage:NA, dead, 240 days 161.6
AK123 N, NA, stage:NA, dead, 180 days 152.7
AK091 N, NA, stage:NA, dead, 210 days 149.0
AK236 N, NA, stage:NA, dead, 360 days 148.0
AK068 N, NA, stage:NA, alive, 360 days 137.9
AK218 N, NA, stage:NA, dead, 180 days 137.2
AK055 N, NA, stage:NA, dead, 240 days 135.4
AK227 N, NA, stage:NA, alive, 300 days 131.5
AK226 N, NA, stage:NA, dead, 360 days 131.1
AK195 N, NA, stage:NA, dead, 390 days 127.5
AK089 N, NA, stage:NA, dead, 330 days 127.0
AK066 N, NA, stage:NA, alive, 960 days 118.9
AK102 N, NA, stage:NA, alive, 1740 days 118.3
AK072 N, NA, stage:NA, dead, 150 days 110.9
AK153 N, NA, stage:NA, dead, 240 days 110.8
AK149 N, NA, stage:NA, dead, 420 days 109.8
AK158 N, NA, stage:NA, dead, 360 days 104.2
AK165 N, NA, stage:NA, alive, 360 days 102.0
AK188 N, NA, stage:NA, alive, 420 days 98.6
AK139 N, NA, stage:NA, dead, 270 days 96.0
AK098 N, NA, stage:NA, dead, 660 days 94.9
AK099 N, NA, stage:NA, dead, 420 days 94.6
AK185 N, NA, stage:NA, alive, 330 days 94.3
AK213 N, NA, stage:NA, alive, 2010 days 92.9
AK074 N, NA, stage:NA, alive, 300 days 92.1
AK081 N, NA, stage:NA, dead, 180 days 92.0
AK071 N, NA, stage:NA, dead, 540 days 91.9
AK167 N, NA, stage:NA, dead, 180 days 90.7
AK178 N, NA, stage:NA, dead, 240 days 89.2
AK030 N, NA, stage:NA, dead, 120 days 87.7
AK053 N, NA, stage:NA, dead, 300 days 83.0
AK205 N, NA, stage:NA, dead, 120 days 82.9
AK041 N, NA, stage:NA, alive, 810 days 82.7
AK216 N, NA, stage:NA, dead, 360 days 80.9
AK124 N, NA, stage:NA, alive, 1920 days 76.0
AK100 N, NA, stage:NA, alive, 960 days 75.0
AK142 N, NA, stage:NA, alive, 90 days 68.2
AK085 N, NA, stage:NA, alive, 660 days 66.9
AK183 N, NA, stage:NA, alive, 360 days 65.2
AK051 N, NA, stage:NA, dead, 360 days 63.2
AK199 N, NA, stage:NA, alive, 1860 days 62.0
AK076 N, NA, stage:NA, alive, 660 days 62.0
AK015 N, NA, stage:NA, alive, 720 days 56.4
AK103 N, NA, stage:NA, alive, 1320 days 54.7
AK231 N, NA, stage:NA, dead, 240 days 52.7
AK049 N, NA, stage:NA, dead, 180 days 45.5
AK173 N, NA, stage:NA, dead, 180 days 45.3
AK003 N, NA, stage:NA, dead, 600 days 39.1
AK156 N, NA, stage:NA, dead, 330 days 20.7
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GLIOBLASTOMA MULTIFORME - Protein relative expression (CPTAC)
Number of samples 110
Samples
Sample ID Sample type nRPX
CPT0217000004 Tumor 1.8
CPT0206230003 Tumor 1.8
CPT0087570003 Tumor 1.1
CPT0189460003 Tumor 1.1
CPT0162020003 Tumor 1.1
CPT0189650004 Tumor 1.0
CPT0162100003 Tumor 0.9
CPT0206110003 Tumor 0.9
CPT0125570003 Tumor 0.9
CPT0219080004 Tumor 0.9
CPT0205570003 Tumor 0.8
CPT0093360003 Tumor 0.8
CPT0205450004 Tumor 0.8
CPT0168380003 Tumor 0.8
CPT0087730003 Tumor 0.6
CPT0087950003 Tumor 0.6
CPT0206560003 Tumor 0.6
CPT0221180003 Tumor 0.5
CPT0206880003 Tumor 0.5
CPT0186100003 Tumor 0.4
CPT0089150003 Tumor 0.4
CPT0218770003 Tumor 0.4
CPT0127480003 Tumor 0.4
CPT0175060003 Tumor 0.3
CPT0189850004 Tumor 0.3
CPT0123530003 Tumor 0.3
CPT0218690004 Tumor 0.3
CPT0168830003 Tumor 0.3
CPT0206780003 Tumor 0.3
CPT0196850003 Tumor 0.3
CPT0205780003 Tumor 0.2
CPT0125220003 Tumor 0.2
CPT0078580003 Tumor 0.2
CPT0127420003 Tumor 0.2
CPT0002410011 Tumor 0.2
CPT0218890004 Tumor 0.2
CPT0217060003 Tumor 0.2
CPT0167640003 Tumor 0.1
CPT0064650003 Tumor 0.1
CPT0167530003 Tumor 0.1
CPT0182500003 Tumor 0.1
CPT0079790003 Tumor 0.1
CPT0224540004 Tumor 0.1
CPT0190360004 Tumor 0.1
CPT0093550003 Tumor 0.1
CPT0217430008 Tumor 0.1
CPT0206450003 Tumor 0.1
CPT0216920008 Tumor 0.1
CPT0064890003 Tumor 0.0
CPT0071100003 Tumor 0.0
CPT0204380003 Normal 0.0
CPT0167970003 Tumor 0.0
CPT0217880003 Tumor -0.1
CPT0206000004 Tumor -0.1
CPT0204330003 Normal -0.1
CPT0217190003 Tumor -0.1
CPT0168590003 Tumor -0.1
CPT0182580003 Tumor -0.1
CPT0217710008 Tumor -0.1
CPT0228220003 Tumor -0.1
CPT0224390004 Tumor -0.2
CPT0204410003 Normal -0.2
CPT0208980003 Tumor -0.3
CPT0182550003 Tumor -0.3
CPT0093450003 Tumor -0.3
CPT0189750004 Tumor -0.3
CPT0092440003 Tumor -0.3
CPT0204340003 Normal -0.3
CPT0087680003 Tumor -0.3
CPT0168080003 Tumor -0.3
CPT0204350003 Normal -0.3
CPT0207090003 Tumor -0.3
CPT0168480003 Tumor -0.4
CPT0093510003 Tumor -0.4
CPT0201710003 Tumor -0.4
CPT0218670003 Tumor -0.4
CPT0161730003 Tumor -0.4
CPT0093590003 Tumor -0.4
CPT0204420003 Normal -0.4
CPT0225760003 Tumor -0.4
CPT0218330004 Tumor -0.4
CPT0204400003 Normal -0.5
CPT0189570004 Tumor -0.5
CPT0205670004 Tumor -0.5
CPT0189250003 Tumor -0.5
CPT0218830004 Tumor -0.5
CPT0167860004 Tumor -0.5
CPT0217100003 Tumor -0.5
CPT0204390003 Normal -0.5
CPT0209440003 Tumor -0.5
CPT0171580008 Tumor -0.5
CPT0225730003 Tumor -0.5
CPT0168720003 Tumor -0.5
CPT0205890003 Tumor -0.5
CPT0224600003 Tumor -0.6
CPT0125510003 Tumor -0.6
CPT0207030003 Tumor -0.6
CPT0104330003 Tumor -0.6
CPT0218960004 Tumor -0.6
CPT0168270003 Tumor -0.6
CPT0162140003 Tumor -0.6
CPT0206330003 Tumor -0.7
CPT0204360003 Normal -0.7
CPT0204370003 Normal -0.7
CPT0167750004 Tumor -0.7
CPT0199770003 Tumor -0.8
CPT0224330003 Tumor -0.8
CPT0206670004 Tumor -0.9
CPT0104220003 Tumor -1.1
CPT0190240004 Tumor -1.4
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GLIOMA - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Pending cancer tissue analysis

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