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BRDT
HPA
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  • TISSUE
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  • SUMMARY

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  • BRAIN

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  • STRUCT & INT

  • BRDT
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BRDT
Synonyms BRD6, CT9
Gene descriptioni

Full gene name according to HGNC.

Bromodomain testis associated
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p22.1
Chromosome location (bp) 91949343 - 92014426
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

20
Ensembl ENSG00000137948 (version 109)
Entrez gene 676
HGNC HGNC:1105
UniProt Q58F21 (UniProt - Evidence at protein level)
neXtProt NX_Q58F21
GeneCards BRDT
Antibodypedia BRDT antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Testis-specific chromatin protein that specifically binds histone H4 acetylated at 'Lys-5' and 'Lys-8' (H4K5ac and H4K8ac, respectively) and plays a key role in spermatogenesis 1, 2. Required in late pachytene spermatocytes: plays a role in meiotic and post-meiotic cells by binding to acetylated histones at the promoter of specific meiotic and post-meiotic genes, facilitating their activation at the appropriate time 3. In the post-meiotic phase of spermatogenesis, binds to hyperacetylated histones and participates in their general removal from DNA 4. Also recognizes and binds a subset of butyrylated histones: able to bind histone H4 butyrylated at 'Lys-8' (H4K8ac), while it is not able to bind H4 butyrylated at 'Lys-5' (H4K5ac) (By similarity). Also acts as a component of the splicing machinery in pachytene spermatocytes and round spermatids and participates in 3'-UTR truncation of specific mRNAs in post-meiotic spermatids (By similarity). Required for chromocenter organization, a structure comprised of peri-centromeric heterochromatin.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator, Chromatin regulator
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Meiosis, mRNA processing, mRNA splicing, Spermatogenesis, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

BRDT is similar to the RING3 protein family. It possesses 2 bromodomain motifs and a PEST sequence (a cluster of proline, glutamic acid, serine, and threonine residues), characteristic of proteins that undergo rapid intracellular degradation. The bromodomain is found in proteins that regulate transcription. Several transcript variants encoding multiple isoforms have been found for this gene. [provided by RefSeq, Jun 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
BRDT-201
ENSP00000400199
ENST00000355011
C9J0Z0
[Direct mapping] Bromodomain testis-specific protein
Show all
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
14 aa
1.5 kDa
No 0
BRDT-202
ENSP00000354568
ENST00000362005
Q58F21
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006325 [chromatin organization]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006397 [mRNA processing]
GO:0007140 [male meiotic nuclear division]
GO:0007141 [male meiosis I]
GO:0007283 [spermatogenesis]
GO:0008380 [RNA splicing]
GO:0030154 [cell differentiation]
GO:0035092 [sperm DNA condensation]
GO:0042393 [histone binding]
GO:0043484 [regulation of RNA splicing]
GO:0051039 [positive regulation of transcription involved in meiotic cell cycle]
GO:0051321 [meiotic cell cycle]
GO:0070577 [lysine-acetylated histone binding]
GO:0140566 [histone reader activity]
Show all
947 aa
108 kDa
No 0
BRDT-203
ENSP00000359416
ENST00000370389
Q58F21
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006325 [chromatin organization]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006397 [mRNA processing]
GO:0007140 [male meiotic nuclear division]
GO:0007141 [male meiosis I]
GO:0007283 [spermatogenesis]
GO:0008380 [RNA splicing]
GO:0030154 [cell differentiation]
GO:0035092 [sperm DNA condensation]
GO:0042393 [histone binding]
GO:0043484 [regulation of RNA splicing]
GO:0051039 [positive regulation of transcription involved in meiotic cell cycle]
GO:0051321 [meiotic cell cycle]
GO:0070577 [lysine-acetylated histone binding]
GO:0140566 [histone reader activity]
Show all
874 aa
99.4 kDa
No 0
BRDT-204
ENSP00000378038
ENST00000394530
Q58F21
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006325 [chromatin organization]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006397 [mRNA processing]
GO:0007140 [male meiotic nuclear division]
GO:0007141 [male meiosis I]
GO:0007283 [spermatogenesis]
GO:0008380 [RNA splicing]
GO:0030154 [cell differentiation]
GO:0035092 [sperm DNA condensation]
GO:0042393 [histone binding]
GO:0043484 [regulation of RNA splicing]
GO:0051039 [positive regulation of transcription involved in meiotic cell cycle]
GO:0051321 [meiotic cell cycle]
GO:0070577 [lysine-acetylated histone binding]
GO:0140566 [histone reader activity]
Show all
901 aa
102.4 kDa
No 0
BRDT-205
ENSP00000387822
ENST00000399546
Q58F21
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006325 [chromatin organization]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006397 [mRNA processing]
GO:0007140 [male meiotic nuclear division]
GO:0007141 [male meiosis I]
GO:0007283 [spermatogenesis]
GO:0008380 [RNA splicing]
GO:0030154 [cell differentiation]
GO:0035092 [sperm DNA condensation]
GO:0042393 [histone binding]
GO:0043484 [regulation of RNA splicing]
GO:0051039 [positive regulation of transcription involved in meiotic cell cycle]
GO:0051321 [meiotic cell cycle]
GO:0070577 [lysine-acetylated histone binding]
GO:0140566 [histone reader activity]
Show all
947 aa
108 kDa
No 0
BRDT-206
ENSP00000384051
ENST00000402388
Q58F21
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006325 [chromatin organization]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006397 [mRNA processing]
GO:0007140 [male meiotic nuclear division]
GO:0007141 [male meiosis I]
GO:0007283 [spermatogenesis]
GO:0008380 [RNA splicing]
GO:0030154 [cell differentiation]
GO:0035092 [sperm DNA condensation]
GO:0042393 [histone binding]
GO:0043484 [regulation of RNA splicing]
GO:0051039 [positive regulation of transcription involved in meiotic cell cycle]
GO:0051321 [meiotic cell cycle]
GO:0070577 [lysine-acetylated histone binding]
GO:0140566 [histone reader activity]
Show all
947 aa
108 kDa
No 0
BRDT-207
ENSP00000396351
ENST00000423434
C9JD82
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
176 aa
20.4 kDa
No 0
BRDT-208
ENSP00000404969
ENST00000426141
C9JJU3
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
462 aa
52.8 kDa
No 0
BRDT-209
ENSP00000400002
ENST00000427104
C9J1F7
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
155 aa
18.1 kDa
No 0
BRDT-210
ENSP00000416714
ENST00000440509
C9JDL5
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
200 aa
22.8 kDa
No 0
BRDT-211
ENSP00000410587
ENST00000448194
C9J3A0
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
238 aa
26.7 kDa
No 0
BRDT-212
ENSP00000408625
ENST00000449584
C9JMP1
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
52 aa
6.1 kDa
No 0
BRDT-213
ENSP00000414349
ENST00000450792
C9JLZ2
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
96 aa
11.3 kDa
No 0
BRDT-214
ENSP00000408138
ENST00000457265
C9JQ27
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
31 aa
3.5 kDa
No 0
BRDT-216
ENSP00000506247
ENST00000470955
A0A7P0TAR6
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
71 aa
8.4 kDa
No 0
BRDT-220
ENSP00000447394
ENST00000548992
F8VZ63
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
100 aa
11.8 kDa
No 0
BRDT-221
ENSP00000446599
ENST00000552654
F8W0H2
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
63 aa
7.4 kDa
No 0
BRDT-222
ENSP00000506227
ENST00000680091
A0A7P0TAQ7
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
475 aa
54.4 kDa
No 0
BRDT-223
ENSP00000506530
ENST00000680194
A0A7P0TB14
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
251 aa
28.3 kDa
No 0
BRDT-224
ENSP00000505035
ENST00000680541
A0A7P0T8B0
[Direct mapping] Bromodomain testis-specific protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
Show all
345 aa
39.1 kDa
No 0

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