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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:134.9 nTPM
HPA Brain:133.0 nTPM
GTEx:134.9 nTPM
FANTOM5:193.3 Scaled Tags Per Million
Pig:91.8 nTPM
Mouse:113.7 nTPM
Allen mouse:1.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA037539Antibody HPA037540
Glial cells HighLow
Neuronal cells LowLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 93.5
2481 Female, age 94, left hemisphere 146.5
2288 Male, age 75, left hemisphere 101.1
1854 Male, age 80, left hemisphere 93.5
1857 Female, age 85, left hemisphere 90.8
2289 Male, age 61, right hemisphere 90.3
2290 Female, age 72, unknown 90.1
2846 Female, age 79, unknown 70.7
1781 Male, age 74, unknown 65.2
Globus pallidus, externus
nTPM: 133.0
1996 Male, age 80, right hemisphere 194.8
2646 Male, age 61, right hemisphere 146.7
2772 Female, age 79, unknown 146.7
2395 Male, age 75, both hemispheres 110.6
2567 Female, age 72, unknown 66.1
Globus pallidus, internus
nTPM: 130.2
2037 Male, age 80, right hemisphere 165.9
1818 Male, age 74, unknown 157.0
2483 Female, age 94, right hemisphere 149.0
2778 Female, age 91, both hemispheres 130.9
2287 Male, age 75, right hemisphere 130.0
2111 Female, age 85, right hemisphere 103.8
2566 Female, age 72, unknown 74.6
Nucleus accumbens
nTPM: 86.4
2391 Female, age 94, left hemisphere 111.2
2286 Male, age 75, left hemisphere 105.9
1806 Female, age 85, left hemisphere 91.4
2732 Male, age 80, right hemisphere 87.0
2698 Female, age 72, unknown 80.3
2824 Male, age 61, right hemisphere 78.7
1856 Female, age 91, right hemisphere 69.5
1783 Male, age 74, unknown 66.9
Nucleus basalis of Meynert
nTPM: 99.6
2569 Male, age 61, both hemispheres 160.9
2393 Male, age 80, right hemisphere 85.7
2484 Female, age 94, left hemisphere 78.2
2821 Male, age 75, both hemispheres 73.7
Nucleus of the diagonal band
nTPM: 60.1
1812 Female, age 91, both hemispheres 71.1
1979 Male, age 74, unknown 61.2
2775 Male, age 80, right hemisphere 58.0
2029 Male, age 61, right hemisphere 57.7
2195 Female, age 85, both hemispheres 52.3
Putamen
nTPM: 76.7
2482 Female, age 94, left hemisphere 112.0
1829 Male, age 74, unknown 85.8
1838 Male, age 80, right hemisphere 76.4
1937 Female, age 91, right hemisphere 74.3
2466 Female, age 79, unknown 73.2
2489 Female, age 72, unknown 61.5
2647 Male, age 75, left hemisphere 54.0
Septal nuclei
nTPM: 67.8
2394 Male, age 61, left hemisphere 83.8
2199 Male, age 80, right hemisphere 79.1
2059 Female, age 85, both hemispheres 78.5
2031 Female, age 72, unknown 64.6
2009 Female, age 91, both hemispheres 60.6
2629 Female, age 94, right hemisphere 56.5
1960 Male, age 74, unknown 51.7
Stria terminalis, bed nucleus
nTPM: 63.6
2201 Male, age 74, unknown 74.8
1974 Female, age 91, both hemispheres 61.6
2486 Female, age 94, both hemispheres 54.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 127.1
Samples: 246

Max nTPM: 304.9
Min nTPM: 36.3
Std nTPM: 43.7
Median nTPM: 116.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 304.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 285.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 238.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 238.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 230.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 228.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 222.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 218.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 218.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 212.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 209.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 208.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 208.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 208.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 204.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 201.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 200.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 196.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 194.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 192.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 189.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 187.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 186.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 182.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 180.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 180.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 179.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 179.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 178.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 178.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 178.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 177.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 177.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 177.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 176.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 176.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 175.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 175.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 174.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 174.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 173.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 171.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 171.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 170.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 170.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 169.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 168.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 168.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 167.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 165.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 163.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 162.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 162.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 161.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 161.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 161.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 160.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 159.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 159.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 158.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 158.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 157.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 157.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 157.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 156.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 156.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 152.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 152.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 150.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 150.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 149.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 148.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 147.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 146.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 146.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 145.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 145.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 144.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 144.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 143.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 141.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 141.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 138.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 138.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 137.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 137.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 134.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 134.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 133.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 133.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 133.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 133.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 132.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 132.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 132.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 131.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 131.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 131.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 131.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 130.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 129.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 129.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 128.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 126.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 125.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 125.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 124.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 124.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 122.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 122.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 122.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 122.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 121.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 120.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 120.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 119.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 119.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 118.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 118.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 117.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 117.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 116.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 116.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 116.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 115.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 115.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 115.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 114.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 114.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 114.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 113.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 113.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 113.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 112.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 112.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 111.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 111.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 110.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 110.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 110.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 110.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 109.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 109.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 109.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 109.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 109.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 109.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 109.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 108.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 108.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 108.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 108.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 107.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 107.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 106.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 106.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 106.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 105.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 104.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 104.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 104.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 103.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 103.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 103.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 103.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 103.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 103.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 103.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 102.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 102.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 102.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 101.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 101.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 100.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 98.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 98.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 97.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 96.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 96.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 96.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 95.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 95.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 95.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 95.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 93.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 92.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 90.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 90.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 90.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 89.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 89.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 88.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 88.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 87.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 86.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 86.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 85.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 85.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 84.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 83.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 83.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 83.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 82.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 82.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 82.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 81.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 81.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 81.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 80.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 80.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 80.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 79.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 79.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 78.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 78.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 78.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 77.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 77.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 77.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 77.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 76.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 76.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 75.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 75.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 75.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 73.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 72.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 72.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 70.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 70.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 67.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 49.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 49.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 43.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 36.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 110.6
Samples: 246

Max nTPM: 259.4
Min nTPM: 47.3
Std nTPM: 46.1
Median nTPM: 96.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 259.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 256.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 253.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 248.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 244.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 235.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 224.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 217.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 212.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 208.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 208.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 207.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 203.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 201.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 198.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 198.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 197.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 197.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 195.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 193.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 192.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 191.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 191.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 190.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 181.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 181.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 179.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 178.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 178.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 175.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 175.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 173.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 168.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 167.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 166.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 163.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 160.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 157.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 155.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 154.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 153.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 152.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 150.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 150.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 148.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 148.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 148.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 148.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 147.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 146.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 146.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 144.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 143.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 141.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 139.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 138.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 137.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 135.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 135.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 134.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 129.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 129.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 129.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 128.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 128.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 127.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 127.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 126.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 125.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 123.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 123.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 122.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 122.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 122.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 122.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 121.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 121.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 121.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 120.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 120.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 118.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 118.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 117.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 117.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 116.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 116.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 116.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 116.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 115.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 115.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 115.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 114.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 113.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 113.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 111.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 111.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 111.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 111.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 110.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 110.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 109.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 109.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 109.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 108.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 107.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 106.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 106.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 105.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 104.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 103.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 103.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 102.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 102.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 101.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 99.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 99.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 98.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 98.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 97.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 96.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 96.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 96.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 96.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 96.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 95.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 95.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 94.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 93.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 93.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 92.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 92.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 92.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 92.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 92.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 92.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 91.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 91.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 91.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 91.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 90.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 90.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 90.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 89.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 89.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 89.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 89.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 89.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 89.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 88.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 88.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 88.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 87.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 87.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 86.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 86.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 86.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 86.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 86.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 86.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 85.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 84.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 84.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 84.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 83.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 83.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 83.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 83.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 82.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 82.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 81.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 81.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 81.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 81.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 80.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 80.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 80.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 79.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 79.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 79.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 79.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 78.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 78.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 78.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 78.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 78.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 77.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 76.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 76.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 76.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 75.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 75.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 75.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 75.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 75.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 74.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 74.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 73.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 73.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 73.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 73.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 73.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 73.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 72.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 71.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 70.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 70.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 70.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 68.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 68.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 68.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 68.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 67.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 66.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 66.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 66.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 65.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 64.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 63.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 63.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 63.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 62.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 62.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 61.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 61.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 60.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 60.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 60.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 58.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 58.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 58.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 58.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 57.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 57.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 56.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 55.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 55.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 55.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 55.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 54.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 53.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 53.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 53.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 52.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 51.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 47.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 47.3
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Brain - Putamen (basal ganglia)
Average nTPM: 134.9
Samples: 205

Max nTPM: 320.8
Min nTPM: 42.6
Std nTPM: 52.1
Median nTPM: 123.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 320.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 310.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 291.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 268.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 266.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 260.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 258.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 250.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 241.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 240.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 238.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 235.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 232.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 230.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 223.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 216.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 211.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 207.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 205.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 205.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 203.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 202.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 202.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 200.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 200.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 194.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 194.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 191.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 191.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 189.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 187.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 186.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 182.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 182.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 181.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 179.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 179.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 179.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 178.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 178.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 177.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 177.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 173.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 171.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 169.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 167.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 166.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 165.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 164.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 163.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 163.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 163.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 163.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 160.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 160.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 159.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 159.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 159.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 158.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 156.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 153.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 152.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 152.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 152.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 152.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 151.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 149.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 148.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 147.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 146.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 145.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 144.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 144.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 144.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 144.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 143.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 142.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 142.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 141.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 141.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 140.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 140.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 140.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 139.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 139.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 139.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 138.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 138.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 137.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 134.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 134.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 132.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 132.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 132.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 131.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 131.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 128.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 128.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 127.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 126.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 126.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 124.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 123.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 123.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 122.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 122.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 122.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 122.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 121.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 120.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 119.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 118.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 117.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 117.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 117.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 116.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 116.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 115.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 115.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 114.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 114.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 114.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 114.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 113.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 113.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 112.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 112.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 112.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 112.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 111.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 111.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 108.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 108.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 108.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 108.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 107.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 106.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 106.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 105.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 105.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 105.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 104.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 103.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 103.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 103.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 102.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 101.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 101.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 98.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 98.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 97.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 96.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 96.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 95.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 95.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 95.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 95.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 94.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 92.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 92.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 92.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 91.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 90.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 90.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 90.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 90.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 89.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 88.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 88.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 87.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 87.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 87.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 87.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 86.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 85.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 85.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 85.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 83.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 82.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 81.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 81.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 80.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 80.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 79.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 78.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 77.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 76.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 75.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 74.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 71.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 70.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 68.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 66.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 66.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 66.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 61.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 58.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 57.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 57.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 55.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 51.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 47.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

193.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 138.8
FF:10164-103B2 76 years, female 138.8
Nucleus accumbens
Scaled Tags Per Million: 124.4
FF:10037-101F1 23-56 years, mixed 124.4
Putamen
Scaled Tags Per Million: 129.1
FF:10176-103C5 60 years, female 129.1
Globus pallidus
Scaled Tags Per Million: 193.3
FF:10175-103C4 60 years, female 210.3
FF:10161-103A8 76 years, female 176.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.8
Pig sample Sample description nTPM
Caudate
nTPM: 73.7
Samples: 4

Max nTPM: 79.6
Min nTPM: 66.8
Sample A Female 69.2
Sample B Female 79.6
Sample C Male 79.2
Sample D Male 66.8
Putamen
nTPM: 91.8
Samples: 4

Max nTPM: 109.7
Min nTPM: 70.8
Sample A Female 109.7
Sample B Female 70.8
Sample C Male 109.3
Sample D Male 77.5
Septum
nTPM: 89.8
Samples: 4

Max nTPM: 97.0
Min nTPM: 82.2
Sample A Female 94.4
Sample B Female 85.6
Sample C Male 97.0
Sample D Male 82.2
Ventral pallidum
nTPM: 87.4
Samples: 4

Max nTPM: 99.9
Min nTPM: 77.5
Sample A Female 77.5
Sample B Female 93.3
Sample C Male 99.9
Sample D Male 78.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 106.6
Samples: 4

Max nTPM: 111.1
Min nTPM: 102.7
Sample A Male 111.1
Sample B Male 102.7
Sample C Female 106.3
Sample D Female 106.4
Septum
nTPM: 113.7
Samples: 4

Max nTPM: 121.2
Min nTPM: 105.1
Sample A Male 105.1
Sample B Male 114.8
Sample C Female 121.2
Sample D Female 113.8
Ventral forebrain
nTPM: 104.5
Samples: 4

Max nTPM: 112.9
Min nTPM: 100.3
Sample A Male 100.3
Sample B Male 112.9
Sample C Female 103.8
Sample D Female 101.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.0
76115729 Antisense, RP_060620_02_B08, Mouse strain C57BL/6J (56 days, male) 1.1
71381040 Antisense, RP_050503_01_F02, Mouse strain C57BL/6J (56 days, male) 0.9
Pallidum
Expression energy: 1.7
76115729 Antisense, RP_060620_02_B08, Mouse strain C57BL/6J (56 days, male) 1.8
71381040 Antisense, RP_050503_01_F02, Mouse strain C57BL/6J (56 days, male) 1.6

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