We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PPM1B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PPM1B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PPM1B
Synonyms PP2CB, PP2CBETA, PPC2BETAX
Gene descriptioni

Full gene name according to HGNC.

Protein phosphatase, Mg2+/Mn2+ dependent 1B
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p21
Chromosome location (bp) 44167969 - 44244384
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000138032 (version 109)
Entrez gene 5495
HGNC HGNC:9276
UniProt O75688 (UniProt - Evidence at protein level)
neXtProt NX_O75688
GeneCards PPM1B
Antibodypedia PPM1B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Enzyme with a broad specificity. Dephosphorylates CDK2 and CDK6 in vitro. Dephosphorylates PRKAA1 and PRKAA2. Inhibits TBK1-mediated antiviral signaling by dephosphorylating it at 'Ser-172'. Plays an important role in the termination of TNF-alpha-mediated NF-kappa-B activation through dephosphorylating and inactivating IKBKB/IKKB.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Protein phosphatase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Magnesium, Manganese, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the PP2C family of Ser/Thr protein phosphatases. PP2C family members are known to be negative regulators of cell stress response pathways. This phosphatase has been shown to dephosphorylate cyclin-dependent kinases (CDKs), and thus may be involved in cell cycle control. Overexpression of this phosphatase is reported to cause cell-growth arrest or cell death. Alternative splicing results in multiple transcript variants encoding different isoforms. Additional transcript variants have been described, but currently do not represent full-length sequences. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PPM1B-201
ENSP00000282412
ENST00000282412
O75688
[Direct mapping] Protein phosphatase 1B
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006470 [protein dephosphorylation]
GO:0006499 [N-terminal protein myristoylation]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0017018 [myosin phosphatase activity]
GO:0030145 [manganese ion binding]
GO:0032688 [negative regulation of interferon-beta production]
GO:0035970 [peptidyl-threonine dephosphorylation]
GO:0043124 [negative regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043169 [cation binding]
GO:0046872 [metal ion binding]
GO:0050687 [negative regulation of defense response to virus]
GO:0090263 [positive regulation of canonical Wnt signaling pathway]
GO:0110165 [cellular anatomical entity]
GO:1901223 [negative regulation of NIK/NF-kappaB signaling]
Show all
479 aa
52.6 kDa
No 0
PPM1B-202
ENSP00000326089
ENST00000345249
O75688
[Direct mapping] Protein phosphatase 1B
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006470 [protein dephosphorylation]
GO:0006499 [N-terminal protein myristoylation]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0017018 [myosin phosphatase activity]
GO:0030145 [manganese ion binding]
GO:0032688 [negative regulation of interferon-beta production]
GO:0035970 [peptidyl-threonine dephosphorylation]
GO:0043124 [negative regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043169 [cation binding]
GO:0046872 [metal ion binding]
GO:0050687 [negative regulation of defense response to virus]
GO:0090263 [positive regulation of canonical Wnt signaling pathway]
GO:0110165 [cellular anatomical entity]
GO:1901223 [negative regulation of NIK/NF-kappaB signaling]
Show all
192 aa
20.8 kDa
No 0
PPM1B-204
ENSP00000367813
ENST00000378551
O75688
[Direct mapping] Protein phosphatase 1B
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006470 [protein dephosphorylation]
GO:0006499 [N-terminal protein myristoylation]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0017018 [myosin phosphatase activity]
GO:0030145 [manganese ion binding]
GO:0032688 [negative regulation of interferon-beta production]
GO:0035970 [peptidyl-threonine dephosphorylation]
GO:0043124 [negative regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043169 [cation binding]
GO:0046872 [metal ion binding]
GO:0050687 [negative regulation of defense response to virus]
GO:0090263 [positive regulation of canonical Wnt signaling pathway]
GO:0110165 [cellular anatomical entity]
GO:1901223 [negative regulation of NIK/NF-kappaB signaling]
Show all
387 aa
42.8 kDa
No 0
PPM1B-205
ENSP00000387287
ENST00000409432
O75688
[Direct mapping] Protein phosphatase 1B
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006470 [protein dephosphorylation]
GO:0006499 [N-terminal protein myristoylation]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0017018 [myosin phosphatase activity]
GO:0030145 [manganese ion binding]
GO:0032688 [negative regulation of interferon-beta production]
GO:0035970 [peptidyl-threonine dephosphorylation]
GO:0043124 [negative regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043169 [cation binding]
GO:0046872 [metal ion binding]
GO:0050687 [negative regulation of defense response to virus]
GO:0090263 [positive regulation of canonical Wnt signaling pathway]
GO:0110165 [cellular anatomical entity]
GO:1901223 [negative regulation of NIK/NF-kappaB signaling]
Show all
380 aa
42.1 kDa
No 0
PPM1B-206
ENSP00000386982
ENST00000409473
B8ZZF0
[Direct mapping] Protein-serine/threonine phosphatase
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006470 [protein dephosphorylation]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0017018 [myosin phosphatase activity]
GO:0030145 [manganese ion binding]
GO:0043169 [cation binding]
GO:0046872 [metal ion binding]
GO:0110165 [cellular anatomical entity]
Show all
303 aa
33.2 kDa
No 0
PPM1B-208
ENSP00000390087
ENST00000419807
C9JIR6
[Direct mapping] Protein-serine/threonine phosphatase
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000287 [magnesium ion binding]
GO:0004721 [phosphoprotein phosphatase activity]
GO:0004722 [protein serine/threonine phosphatase activity]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006470 [protein dephosphorylation]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0017018 [myosin phosphatase activity]
GO:0030145 [manganese ion binding]
GO:0043169 [cation binding]
GO:0046872 [metal ion binding]
GO:0110165 [cellular anatomical entity]
Show all
378 aa
41.8 kDa
No 0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org