HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:43.4 nTPM
HPA Brain:38.5 nTPM
GTEx:43.4 nTPM
FANTOM5:114.7 Scaled Tags Per Million
Pig:68.2 nTPM
Mouse:71.4 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016745
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.5
Sample id Sample description nTPM
Hippocampus
nTPM: 37.8
2529 Female, age 94, left hemisphere 41.8
1911 Female, age 85, right hemisphere 41.6
1898 Male, age 80, left hemisphere 39.6
1855 Male, age 76, left hemisphere 38.8
2148 Female, age 91, left hemisphere 36.7
2621 Female, age 67, right hemisphere 28.0
Dentate gyrus
nTPM: 33.5
2530 Female, age 94, left hemisphere 35.9
1927 Female, age 91, both hemispheres 34.6
2528 Male, age 74, both hemispheres 33.8
2531 Female, age 67, both hemispheres 33.1
2246 Female, age 85, both hemispheres 32.9
2010 Male, age 76, both hemispheres 30.3
Entorhinal gyrus
nTPM: 36.9
1938 Female, age 85, left hemisphere 42.4
2117 Female, age 91, right hemisphere 40.0
2686 Male, age 75, right hemisphere 38.9
2764 Male, age 80, right hemisphere 34.7
2613 Female, age 94, left hemisphere 33.5
1787 Male, age 76, left hemisphere 32.0
Hippocampus, CA1
nTPM: 35.5
1873 Female, age 85, both hemispheres 41.4
2527 Male, age 74, both hemispheres 38.7
2082 Female, age 91, right hemisphere 35.3
2749 Male, age 80, left hemisphere 33.7
2045 Male, age 76, both hemispheres 28.4
Hippocampus, CA2
nTPM: 36.6
2249 Male, age 74, both hemispheres 39.9
1940 Female, age 85, left hemisphere 39.4
1963 Male, age 80, left hemisphere 38.8
2113 Female, age 91, right hemisphere 37.0
2437 Female, age 94, left hemisphere 33.8
1892 Male, age 76, both hemispheres 30.9
Hippocampus, CA3
nTPM: 34.4
1891 Female, age 85, both hemispheres 48.0
1867 Male, age 76, both hemispheres 35.5
2436 Male, age 74, both hemispheres 34.2
2137 Male, age 80, left hemisphere 33.4
2861 Female, age 67, both hemispheres 29.5
2620 Female, age 94, left hemisphere 26.0
Parahippocampal cortex
nTPM: 38.5
2693 Female, age 94, both hemispheres 43.5
1850 Male, age 80, both hemispheres 43.3
1933 Female, age 85, both hemispheres 42.2
2692 Male, age 74, both hemispheres 42.2
2250 Female, age 67, right hemisphere 40.4
1990 Female, age 91, right hemisphere 39.0
2245 Female, age 91, both hemispheres 37.1
2622 Female, age 67, right hemisphere 35.2
2532 Female, age 72, left hemisphere 34.3
2018 Male, age 76, both hemispheres 28.0
Perirhinal gyrus
nTPM: 37.0
1841 Female, age 85, right hemisphere 40.9
1847 Female, age 91, left hemisphere 37.3
2848 Male, age 76, right hemisphere 37.0
2521 Female, age 94, right hemisphere 35.1
1794 Male, age 80, right hemisphere 34.6
Subiculum
nTPM: 37.9
1901 Male, age 80, both hemispheres 44.3
1977 Female, age 85, both hemispheres 40.7
2042 Male, age 76, both hemispheres 39.1
2729 Female, age 91, right hemisphere 36.8
2438 Female, age 94, left hemisphere 35.0
2619 Male, age 74, both hemispheres 31.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.4
Samples: 197

Max nTPM: 126.8
Min nTPM: 20.6
Std nTPM: 13.2
Median nTPM: 40.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 126.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 94.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 91.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 79.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 73.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 73.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 71.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 68.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 67.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 65.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 64.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 114.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.7
FF:10153-102I9 76 years, female 132.9
FF:10169-103B7 60 years, female 96.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 68.2
Pig sample Sample description nTPM
Subiculum
nTPM: 61.9
Samples: 4

Max nTPM: 71.5
Min nTPM: 56.6
Sample A Female 71.5
Sample B Female 62.7
Sample C Male 56.6
Sample D Male 56.9
Dorsal hippocampus
nTPM: 68.2
Samples: 4

Max nTPM: 84.0
Min nTPM: 52.9
Sample A Female 84.0
Sample B Female 64.1
Sample C Male 71.6
Sample D Male 52.9
Entorhinal cortex
nTPM: 65.9
Samples: 4

Max nTPM: 78.8
Min nTPM: 58.2
Sample A Female 65.2
Sample B Female 78.8
Sample C Male 61.3
Sample D Male 58.2
Ventral hippocampus
nTPM: 61.7
Samples: 4

Max nTPM: 69.2
Min nTPM: 57.1
Sample A Female 61.4
Sample B Female 57.1
Sample C Male 59.0
Sample D Male 69.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 71.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.4
Samples: 4

Max nTPM: 73.4
Min nTPM: 70.1
Sample A Male 70.1
Sample B Male 71.8
Sample C Female 70.4
Sample D Female 73.4
Hippocampal formation
nTPM: 65.8
Samples: 4

Max nTPM: 68.9
Min nTPM: 63.6
Sample A Male 64.5
Sample B Male 66.1
Sample C Female 68.9
Sample D Female 63.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
68193051 Antisense, RP_040826_01_E06, Mouse strain C57BL/6J (56 days, male) 2.0

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