HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:58.1 nTPM
HPA Brain:113.0 nTPM
GTEx:58.1 nTPM
FANTOM5:122.7 Scaled Tags Per Million
Pig:200.3 nTPM
Mouse:235.7 nTPM
Allen mouse:16.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005083
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 113.0
Sample id Sample description nTPM
Hippocampus
nTPM: 94.1
1898 Male, age 80, left hemisphere 135.6
1855 Male, age 76, left hemisphere 100.3
1911 Female, age 85, right hemisphere 94.2
2621 Female, age 67, right hemisphere 85.0
2529 Female, age 94, left hemisphere 80.7
2148 Female, age 91, left hemisphere 68.6
Dentate gyrus
nTPM: 87.8
1927 Female, age 91, both hemispheres 112.8
2010 Male, age 76, both hemispheres 107.6
2530 Female, age 94, left hemisphere 86.1
2246 Female, age 85, both hemispheres 81.3
2528 Male, age 74, both hemispheres 78.8
2531 Female, age 67, both hemispheres 60.2
Entorhinal gyrus
nTPM: 83.0
1938 Female, age 85, left hemisphere 108.6
1787 Male, age 76, left hemisphere 86.8
2117 Female, age 91, right hemisphere 83.4
2764 Male, age 80, right hemisphere 81.0
2613 Female, age 94, left hemisphere 71.2
2686 Male, age 75, right hemisphere 67.0
Hippocampus, CA1
nTPM: 109.7
2749 Male, age 80, left hemisphere 181.4
1873 Female, age 85, both hemispheres 116.6
2045 Male, age 76, both hemispheres 89.1
2527 Male, age 74, both hemispheres 85.3
2082 Female, age 91, right hemisphere 76.2
Hippocampus, CA2
nTPM: 103.0
1892 Male, age 76, both hemispheres 134.5
1963 Male, age 80, left hemisphere 125.5
1940 Female, age 85, left hemisphere 101.9
2249 Male, age 74, both hemispheres 95.0
2437 Female, age 94, left hemisphere 83.6
2113 Female, age 91, right hemisphere 77.6
Hippocampus, CA3
nTPM: 96.9
2137 Male, age 80, left hemisphere 165.9
1867 Male, age 76, both hemispheres 118.6
1891 Female, age 85, both hemispheres 94.7
2436 Male, age 74, both hemispheres 88.3
2861 Female, age 67, both hemispheres 59.7
2620 Female, age 94, left hemisphere 53.8
Parahippocampal cortex
nTPM: 91.7
1850 Male, age 80, both hemispheres 119.5
1933 Female, age 85, both hemispheres 107.8
2250 Female, age 67, right hemisphere 103.0
1990 Female, age 91, right hemisphere 96.0
2693 Female, age 94, both hemispheres 95.1
2018 Male, age 76, both hemispheres 93.2
2245 Female, age 91, both hemispheres 91.5
2532 Female, age 72, left hemisphere 79.9
2692 Male, age 74, both hemispheres 68.3
2622 Female, age 67, right hemisphere 62.6
Perirhinal gyrus
nTPM: 113.0
1847 Female, age 91, left hemisphere 129.0
1841 Female, age 85, right hemisphere 124.5
1794 Male, age 80, right hemisphere 111.2
2521 Female, age 94, right hemisphere 104.8
2848 Male, age 76, right hemisphere 95.3
Subiculum
nTPM: 89.9
1901 Male, age 80, both hemispheres 123.4
2042 Male, age 76, both hemispheres 102.1
1977 Female, age 85, both hemispheres 95.3
2729 Female, age 91, right hemisphere 76.2
2438 Female, age 94, left hemisphere 73.1
2619 Male, age 74, both hemispheres 69.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 58.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.1
Samples: 197

Max nTPM: 110.7
Min nTPM: 30.1
Std nTPM: 17.2
Median nTPM: 54.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 110.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 110.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 110.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 107.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 105.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 103.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 103.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 98.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 95.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 92.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 91.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 122.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.7
FF:10153-102I9 76 years, female 127.1
FF:10169-103B7 60 years, female 118.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 200.3
Pig sample Sample description nTPM
Subiculum
nTPM: 175.4
Samples: 4

Max nTPM: 228.5
Min nTPM: 154.4
Sample A Female 228.5
Sample B Female 161.7
Sample C Male 154.4
Sample D Male 156.9
Dorsal hippocampus
nTPM: 200.3
Samples: 4

Max nTPM: 239.1
Min nTPM: 162.9
Sample A Female 239.1
Sample B Female 202.8
Sample C Male 196.4
Sample D Male 162.9
Entorhinal cortex
nTPM: 186.3
Samples: 4

Max nTPM: 209.3
Min nTPM: 159.4
Sample A Female 194.3
Sample B Female 209.3
Sample C Male 182.0
Sample D Male 159.4
Ventral hippocampus
nTPM: 174.6
Samples: 4

Max nTPM: 209.7
Min nTPM: 150.0
Sample A Female 179.2
Sample B Female 150.0
Sample C Male 159.6
Sample D Male 209.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 235.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 183.5
Samples: 4

Max nTPM: 195.2
Min nTPM: 176.2
Sample A Male 180.4
Sample B Male 176.2
Sample C Female 182.1
Sample D Female 195.2
Hippocampal formation
nTPM: 235.7
Samples: 4

Max nTPM: 257.7
Min nTPM: 198.9
Sample A Male 229.1
Sample B Male 257.1
Sample C Female 257.7
Sample D Female 198.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.1
67 Antisense, RP_040324_01_F02, Mouse strain C57BL/6J (56 days, male) 16.1
68 Antisense, RP_040324_01_F02, Mouse strain C57BL/6J (56 days, male) 13.6

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