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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:101.3 nTPM
HPA:19.4 nTPM
GTEx:101.3 nTPM
FANTOM5:157.0 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036958
Cholangiocytes Not detected
Hepatocytes Not detected



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.4
N/A
Female, age 60
Liver sample 21
nTPM: 23.8
overview
Male, age 54
Liver sample 23
nTPM: 21
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 15.2
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 8.8
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 9.7
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 26.6
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 35
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 18
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 16.4
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 19.8
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.3
GTEx sample id Sample description nTPM
Liver
Average nTPM: 101.3
Samples: 226

Max nTPM: 695.1
Min nTPM: 7.9
Std nTPM: 113.0
Median nTPM: 60.8
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 695.1
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 603.0
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 538.5
GTEX-14XAO-0226-SM-68728 60-69 years, female 461.1
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 433.4
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 417.1
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 374.6
GTEX-O5YV-0726-SM-EV798 60-69 years, female 342.8
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 341.3
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 335.2
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 334.2
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 328.4
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 319.6
GTEX-S32W-1926-SM-4AD63 50-59 years, female 318.1
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 309.0
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 300.8
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 296.4
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 293.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 291.5
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 290.7
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 286.4
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 284.6
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 267.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 254.8
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 253.8
GTEX-REY6-1226-SM-48FDR 60-69 years, male 252.0
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 239.3
GTEX-13113-1326-SM-5GCOI 60-69 years, female 237.1
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 235.6
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 230.7
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 224.3
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 215.7
GTEX-1B932-1426-SM-793AN 40-49 years, female 212.1
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 208.6
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 200.6
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 192.5
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 191.9
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 191.0
GTEX-18A66-2026-SM-7189C 60-69 years, male 190.1
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 189.8
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 185.4
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 177.5
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 175.3
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 173.6
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 170.8
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 170.4
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 162.8
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 153.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 148.8
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 148.4
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 145.6
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 139.1
GTEX-X261-1726-SM-4PQYT 50-59 years, male 136.4
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 136.0
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 135.8
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 135.6
GTEX-12696-0826-SM-5EGGE 60-69 years, male 132.8
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 129.3
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 127.9
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 125.2
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 124.7
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 123.0
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 120.4
GTEX-QEL4-1226-SM-447A4 50-59 years, male 117.7
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 116.9
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 116.0
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 111.0
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 108.8
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 107.4
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 106.8
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 106.0
GTEX-Q734-0326-SM-48U15 40-49 years, female 104.3
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 104.1
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 103.7
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 102.0
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 101.5
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 101.1
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 100.8
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 98.8
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 96.8
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 95.9
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 95.3
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 95.0
GTEX-S33H-1626-SM-4AD68 30-39 years, male 91.2
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 90.9
GTEX-14PJO-1726-SM-68719 60-69 years, male 90.1
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 89.4
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 89.1
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 86.3
GTEX-P78B-1326-SM-3P611 40-49 years, female 85.1
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 84.4
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 82.7
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 81.9
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 79.8
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 79.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 79.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 78.3
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 78.1
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 77.3
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 76.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 74.0
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 71.6
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 70.9
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 69.5
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 68.4
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 65.9
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 64.9
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 64.0
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 63.5
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 63.0
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 62.6
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 62.1
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 61.0
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 60.5
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 58.8
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 58.5
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 58.4
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 58.1
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 57.6
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 54.9
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 51.9
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 51.2
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 49.7
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 49.1
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 48.8
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 48.7
GTEX-14PHX-0526-SM-664NW 50-59 years, male 47.5
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 47.2
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 46.2
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 44.9
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 43.0
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 40.8
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 40.4
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 39.8
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 39.1
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 39.1
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 38.5
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 37.5
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 37.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 35.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 35.9
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 35.7
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 33.9
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 33.9
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 31.7
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 31.3
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 31.0
GTEX-17HHE-0126-SM-79398 50-59 years, male 30.9
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 27.5
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 26.9
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 26.7
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 26.5
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 26.2
GTEX-QESD-2026-SM-447BI 20-29 years, male 25.9
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 25.6
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 25.6
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 25.5
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 24.9
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 24.7
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 24.5
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 24.1
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 23.9
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 23.9
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 23.5
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 23.2
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 23.2
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 23.2
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 22.3
GTEX-1399T-0826-SM-5IFES 60-69 years, male 22.2
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 22.0
GTEX-RN64-1826-SM-48FDV 50-59 years, male 21.7
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 21.6
GTEX-14JG1-1626-SM-664NH 40-49 years, male 20.9
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 20.8
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 20.6
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 20.6
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 20.5
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 20.3
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 20.3
GTEX-1B933-1226-SM-731DW 50-59 years, female 20.1
GTEX-YECK-1926-SM-4W21H 60-69 years, male 18.9
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 18.8
GTEX-144GL-1426-SM-79OMA 50-59 years, male 18.8
GTEX-17F96-1226-SM-79OK2 70-79 years, male 18.7
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 18.5
GTEX-11ZUS-2526-SM-59872 30-39 years, male 18.2
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 18.1
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 18.1
GTEX-18465-1626-SM-7LG6N 50-59 years, male 18.0
GTEX-14E7W-1526-SM-6871X 70-79 years, male 17.9
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 17.8
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 17.6
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 17.1
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 16.8
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 16.8
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 16.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 16.7
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 16.3
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 15.0
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 15.0
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 14.8
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 14.8
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 14.6
GTEX-18A7A-1526-SM-72D69 50-59 years, female 14.4
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 14.3
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 14.1
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 13.9
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 13.7
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 13.6
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 13.6
GTEX-13112-1426-SM-5EGH8 50-59 years, male 13.5
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 13.3
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 12.9
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 12.7
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 12.6
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 12.0
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 11.6
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 11.5
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 11.2
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 10.5
GTEX-11GSP-0626-SM-5986T 60-69 years, female 10.3
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 10.2
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 9.9
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 9.4
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 9.1
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 7.9
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

157.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 157.0
FF:10018-101C9 64,69,70 years, mixed 157.0

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