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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:47.0 nTPM
HPA Brain:58.1 nTPM
GTEx:47.0 nTPM
FANTOM5:125.8 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:98.5 nTPM
Allen mouse:10.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035790
Glial cells High
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 47.4
2846 Female, age 79, unknown 59.1
1857 Female, age 85, left hemisphere 50.6
2290 Female, age 72, unknown 48.7
2288 Male, age 75, left hemisphere 48.1
1854 Male, age 80, left hemisphere 47.8
2481 Female, age 94, left hemisphere 47.8
1781 Male, age 74, unknown 45.5
2289 Male, age 61, right hemisphere 31.9
Globus pallidus, externus
nTPM: 33.8
2395 Male, age 75, both hemispheres 52.9
2772 Female, age 79, unknown 45.6
1996 Male, age 80, right hemisphere 31.2
2646 Male, age 61, right hemisphere 20.6
2567 Female, age 72, unknown 18.7
Globus pallidus, internus
nTPM: 35.6
2287 Male, age 75, right hemisphere 49.2
2778 Female, age 91, both hemispheres 39.8
2483 Female, age 94, right hemisphere 36.8
1818 Male, age 74, unknown 34.7
2037 Male, age 80, right hemisphere 34.7
2566 Female, age 72, unknown 27.3
2111 Female, age 85, right hemisphere 26.3
Nucleus accumbens
nTPM: 47.0
1856 Female, age 91, right hemisphere 63.3
2698 Female, age 72, unknown 50.0
2391 Female, age 94, left hemisphere 48.9
1806 Female, age 85, left hemisphere 46.3
1783 Male, age 74, unknown 45.9
2286 Male, age 75, left hemisphere 45.5
2824 Male, age 61, right hemisphere 44.8
2732 Male, age 80, right hemisphere 31.7
Nucleus basalis of Meynert
nTPM: 38.3
2393 Male, age 80, right hemisphere 46.9
2484 Female, age 94, left hemisphere 43.1
2821 Male, age 75, both hemispheres 42.3
2569 Male, age 61, both hemispheres 20.7
Nucleus of the diagonal band
nTPM: 58.1
2775 Male, age 80, right hemisphere 69.3
1812 Female, age 91, both hemispheres 64.7
2195 Female, age 85, both hemispheres 58.9
2029 Male, age 61, right hemisphere 54.6
1979 Male, age 74, unknown 42.8
Putamen
nTPM: 44.7
2466 Female, age 79, unknown 59.2
1838 Male, age 80, right hemisphere 53.5
1937 Female, age 91, right hemisphere 48.9
1829 Male, age 74, unknown 46.6
2482 Female, age 94, left hemisphere 42.4
2647 Male, age 75, left hemisphere 33.9
2489 Female, age 72, unknown 28.7
Septal nuclei
nTPM: 51.4
2031 Female, age 72, unknown 74.9
1960 Male, age 74, unknown 61.8
2009 Female, age 91, both hemispheres 55.2
2629 Female, age 94, right hemisphere 51.7
2199 Male, age 80, right hemisphere 41.6
2059 Female, age 85, both hemispheres 37.9
2394 Male, age 61, left hemisphere 36.5
Stria terminalis, bed nucleus
nTPM: 52.1
1974 Female, age 91, both hemispheres 64.0
2486 Female, age 94, both hemispheres 50.2
2201 Male, age 74, unknown 42.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 43.6
Samples: 246

Max nTPM: 137.4
Min nTPM: 13.8
Std nTPM: 17.2
Median nTPM: 40.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 137.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 101.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 93.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 91.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 89.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 87.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 81.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 77.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 74.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 74.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 74.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 74.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 73.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 72.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 72.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 71.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 71.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 69.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 68.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 68.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 68.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 67.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 67.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 66.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 66.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 65.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 65.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 64.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 64.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 64.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 62.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 62.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 62.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 62.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 60.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 60.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 59.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 59.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 58.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 58.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 57.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 57.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 57.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 57.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 55.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 55.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 55.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 55.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 55.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 54.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 54.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 54.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 53.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 53.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 52.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 52.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 52.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 51.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 50.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 50.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 50.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 50.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 50.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 50.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 50.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 49.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 49.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 49.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 49.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 49.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 48.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 48.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 47.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 47.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 47.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 46.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 46.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 46.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 46.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 46.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 45.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 45.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 45.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 45.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 44.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 44.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 44.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 44.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 44.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 44.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 44.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 44.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 44.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 43.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 43.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 42.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 42.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 42.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 41.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 41.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 41.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 40.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 40.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 40.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 40.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 39.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 39.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 39.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 39.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 38.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 38.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 38.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 38.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 38.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 37.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 37.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 37.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 37.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 37.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 37.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 37.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 36.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 36.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 36.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 36.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 36.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 36.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 35.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 35.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 35.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 35.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 35.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 35.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 35.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 34.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 34.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 34.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 34.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 33.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 33.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 33.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 32.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 32.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 32.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 32.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 31.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 31.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 31.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 31.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 31.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 31.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 30.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 30.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 30.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 30.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 30.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 30.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 30.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 29.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 28.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 28.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 28.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 28.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 28.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 27.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 27.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 27.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 26.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 26.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 26.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 26.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 25.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 25.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 25.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 25.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 25.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 25.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 25.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 24.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 24.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 24.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 24.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 24.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 24.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 24.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 23.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 23.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 23.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 23.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 23.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 23.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 23.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 23.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 22.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 22.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 22.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 21.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 21.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 21.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 20.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 20.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 20.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 19.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 19.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 17.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 13.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 47.0
Samples: 246

Max nTPM: 91.7
Min nTPM: 15.0
Std nTPM: 14.7
Median nTPM: 47.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 91.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 89.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 79.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 76.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 75.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 73.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 73.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 73.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 72.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 72.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 72.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 71.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 69.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 68.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 68.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 68.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 67.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 67.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 67.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 67.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 66.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 66.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 65.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 65.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 65.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 65.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 65.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 65.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 64.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 64.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 63.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 63.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 63.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 62.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 62.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 62.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 61.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 61.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 61.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 60.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 60.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 60.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 60.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 60.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 60.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 59.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 59.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 59.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 59.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 59.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 59.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 59.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 59.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 59.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 58.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 58.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 58.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 58.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 57.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 57.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 57.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 57.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 57.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 57.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 56.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 56.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 56.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 56.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 56.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 56.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 56.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 56.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 56.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 55.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 55.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 55.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 55.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 54.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 54.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 54.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 54.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 54.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 54.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 53.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 53.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 53.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 53.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 53.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 53.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 53.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 52.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 52.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 52.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 52.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 52.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 51.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 51.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 51.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 51.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 51.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 50.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 50.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 50.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 50.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 50.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 49.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 49.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 48.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 48.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 48.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 48.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 48.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 48.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 48.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 48.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 48.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 47.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 47.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 47.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 47.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 47.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 46.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 46.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 46.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 46.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 46.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 46.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 46.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 45.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 45.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 45.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 44.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 44.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 44.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 44.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 44.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 44.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 44.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 43.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 43.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 43.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 42.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 42.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 42.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 42.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 42.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 42.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 42.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 42.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 42.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 41.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 41.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 41.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 41.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 41.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 40.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 40.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 40.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 40.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 40.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 40.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 40.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 40.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 40.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 39.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 39.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 38.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 38.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 38.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 38.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 38.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 38.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 38.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 38.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 37.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 37.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 37.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 36.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 35.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 35.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 35.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 35.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 34.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 34.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 34.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 34.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 34.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 33.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 33.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 32.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 32.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 31.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 30.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 30.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 30.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 30.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 29.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 29.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 29.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 29.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 29.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 29.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 28.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 28.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 27.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 27.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 27.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 26.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 26.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 26.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 26.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 26.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 25.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 25.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 24.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 24.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 23.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 23.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 23.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 23.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 23.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 23.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 23.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 23.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 22.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 22.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 21.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 21.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 20.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 20.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 19.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 19.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 19.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 18.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 15.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 15.0
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Brain - Putamen (basal ganglia)
Average nTPM: 42.3
Samples: 205

Max nTPM: 107.7
Min nTPM: 16.2
Std nTPM: 15.4
Median nTPM: 39.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 107.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 92.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 77.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 77.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 75.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 75.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 74.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 71.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 71.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 69.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 69.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 69.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 67.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 67.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 66.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 66.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 65.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 65.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 63.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 63.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 63.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 62.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 61.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 59.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 59.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 59.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 59.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 58.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 58.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 57.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 57.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 57.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 57.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 55.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 55.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 55.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 54.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 54.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 54.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 54.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 53.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 53.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 52.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 52.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 51.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 51.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 51.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 50.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 50.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 50.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 50.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 48.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 48.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 48.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 48.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 48.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 48.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 47.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 47.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 47.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 47.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 47.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 46.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 46.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 46.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 46.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 46.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 46.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 46.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 45.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 44.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 44.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 44.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 44.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 44.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 43.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 43.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 43.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 43.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 43.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 43.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 42.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 42.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 42.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 41.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 41.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 41.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 41.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 40.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 40.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 40.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 39.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 39.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 39.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 39.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 39.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 39.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 38.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 38.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 38.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 38.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 38.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 38.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 37.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 36.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 36.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 36.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 36.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 36.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 36.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 36.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 35.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 35.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 34.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 34.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 34.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 34.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 34.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 34.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 34.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 34.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 33.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 33.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 33.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 33.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 32.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 32.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 32.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 31.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 31.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 31.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 31.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 31.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 30.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 30.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 29.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 29.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 29.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 29.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 29.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 29.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 29.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 29.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 29.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 28.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 28.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 28.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 28.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 28.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 28.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 27.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 27.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 27.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 27.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 27.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 27.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 27.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 26.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 26.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 26.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 26.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 26.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 26.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 26.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 25.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 25.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 25.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 25.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 24.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 24.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 24.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 24.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 24.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 23.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 23.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 22.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 22.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 21.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 21.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 21.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 21.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 21.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 21.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 19.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 18.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 17.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

125.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 79.6
FF:10164-103B2 76 years, female 79.6
Nucleus accumbens
Scaled Tags Per Million: 125.8
FF:10037-101F1 23-56 years, mixed 125.8
Putamen
Scaled Tags Per Million: 103.1
FF:10176-103C5 60 years, female 103.1
Globus pallidus
Scaled Tags Per Million: 46.2
FF:10161-103A8 76 years, female 48.6
FF:10175-103C4 60 years, female 43.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.9
Pig sample Sample description nTPM
Caudate
nTPM: 37.2
Samples: 4

Max nTPM: 43.6
Min nTPM: 31.0
Sample A Female 38.9
Sample B Female 31.0
Sample C Male 43.6
Sample D Male 35.2
Putamen
nTPM: 43.9
Samples: 4

Max nTPM: 74.1
Min nTPM: 31.3
Sample A Female 31.3
Sample B Female 36.3
Sample C Male 74.1
Sample D Male 33.8
Septum
nTPM: 42.0
Samples: 4

Max nTPM: 52.5
Min nTPM: 33.6
Sample A Female 38.2
Sample B Female 33.6
Sample C Male 43.8
Sample D Male 52.5
Ventral pallidum
nTPM: 36.8
Samples: 4

Max nTPM: 40.8
Min nTPM: 30.7
Sample A Female 37.9
Sample B Female 37.8
Sample C Male 40.8
Sample D Male 30.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 71.9
Samples: 4

Max nTPM: 76.7
Min nTPM: 67.4
Sample A Male 75.6
Sample B Male 67.4
Sample C Female 76.7
Sample D Female 67.8
Septum
nTPM: 98.5
Samples: 4

Max nTPM: 110.7
Min nTPM: 84.8
Sample A Male 84.8
Sample B Male 110.7
Sample C Female 94.2
Sample D Female 104.2
Ventral forebrain
nTPM: 76.4
Samples: 4

Max nTPM: 78.3
Min nTPM: 74.1
Sample A Male 75.0
Sample B Male 78.2
Sample C Female 74.1
Sample D Female 78.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.3
71608294 Antisense, RP_050927_01_D09, Mouse strain C57BL/6J (56 days, male) 12.0
293038 Antisense, RP_040609_01_F01, Mouse strain C57BL/6J (56 days, male) 8.6
Pallidum
Expression energy: 8.8
71608294 Antisense, RP_050927_01_D09, Mouse strain C57BL/6J (56 days, male) 9.6
293038 Antisense, RP_040609_01_F01, Mouse strain C57BL/6J (56 days, male) 8.0

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