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SECISBP2L
HPA
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  • SECISBP2L
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SECISBP2L
Synonyms KIAA0256
Gene descriptioni

Full gene name according to HGNC.

SECIS binding protein 2 like
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q21.1
Chromosome location (bp) 48988476 - 49046447
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000138593 (version 109)
Entrez gene 9728
HGNC HGNC:28997
UniProt Q93073 (UniProt - Evidence at protein level)
neXtProt NX_Q93073
GeneCards SECISBP2L
Antibodypedia SECISBP2L antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Binds SECIS (Sec insertion sequence) elements present on selenocysteine (Sec) protein mRNAs, but does not promote Sec incorporation into selenoproteins in vitro.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables RNA binding activity. Predicted to be involved in selenocysteine incorporation. Predicted to be part of ribonucleoprotein complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SECISBP2L-201
ENSP00000261847
ENST00000261847
Q93073
[Direct mapping] Selenocysteine insertion sequence-binding protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001514 [selenocysteine incorporation]
GO:0003723 [RNA binding]
GO:0003730 [mRNA 3'-UTR binding]
GO:0005515 [protein binding]
GO:0035368 [selenocysteine insertion sequence binding]
GO:0043021 [ribonucleoprotein complex binding]
GO:1990904 [ribonucleoprotein complex]
Show all
1056 aa
116.5 kDa
No 0
SECISBP2L-202
ENSP00000370314
ENST00000380927
J3KPI1
[Direct mapping] Selenocysteine insertion sequence-binding protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0035368 [selenocysteine insertion sequence binding]
Show all
630 aa
69.8 kDa
No 0
SECISBP2L-208
ENSP00000452987
ENST00000559424
H0YKY4
[Direct mapping] Selenocysteine insertion sequence-binding protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0035368 [selenocysteine insertion sequence binding]
Show all
312 aa
34.8 kDa
No 0
SECISBP2L-209
ENSP00000453854
ENST00000559471
Q93073
[Direct mapping] Selenocysteine insertion sequence-binding protein 2-like
Show all
A0A024R5R0
[Target identity:100%; Query identity:100%] KIAA0256 gene product, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001514 [selenocysteine incorporation]
GO:0003723 [RNA binding]
GO:0003730 [mRNA 3'-UTR binding]
GO:0005515 [protein binding]
GO:0035368 [selenocysteine insertion sequence binding]
GO:0043021 [ribonucleoprotein complex binding]
GO:1990904 [ribonucleoprotein complex]
Show all
1101 aa
121.8 kDa
No 0
SECISBP2L-211
ENSP00000454144
ENST00000561428
H0YNT4
[Direct mapping] Selenocysteine insertion sequence-binding protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0035368 [selenocysteine insertion sequence binding]
Show all
95 aa
10.6 kDa
No 0

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