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HCN4
HPA
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  • HCN4
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

HCN4
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Hyperpolarization activated cyclic nucleotide gated potassium channel 4
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Voltage-gated ion channels
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q24.1
Chromosome location (bp) 73319859 - 73368958
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
Ensembl ENSG00000138622 (version 109)
Entrez gene 10021
HGNC HGNC:16882
UniProt Q9Y3Q4 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y3Q4
GeneCards HCN4
Antibodypedia HCN4 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Hyperpolarization-activated ion channel with very slow activation and inactivation exhibiting weak selectivity for potassium over sodium ions. Contributes to the native pacemaker currents in heart (If) that regulate the rhythm of heart beat. May contribute to the native pacemaker currents in neurons (Ih). May mediate responses to sour stimuli.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Ligand-gated ion channel, Potassium channel, Sodium channel, Voltage-gated channel
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Potassium transport, Sodium transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

cAMP, cAMP-binding, Nucleotide-binding, Potassium, Sodium
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the hyperpolarization-activated cyclic nucleotide-gated potassium channels. The encoded protein shows slow kinetics of activation and inactivation, and is necessary for the cardiac pacemaking process. This channel may also mediate responses to sour stimuli. Mutations in this gene have been linked to sick sinus syndrome 2, also known as atrial fibrillation with bradyarrhythmia or familial sinus bradycardia. Two pseudogenes have been identified on chromosome 15. [provided by RefSeq, Oct 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
HCN4-201
ENSP00000261917
ENST00000261917
Q9Y3Q4
[Direct mapping] Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Show all
Transporters
   Transporter channels and pores
Voltage-gated ion channels
   Cyclic Nucleotide-Regulated Channels
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0002027 [regulation of heart rate]
GO:0003163 [sinoatrial node development]
GO:0003254 [regulation of membrane depolarization]
GO:0005216 [ion channel activity]
GO:0005222 [intracellular cAMP-activated cation channel activity]
GO:0005244 [voltage-gated ion channel activity]
GO:0005248 [voltage-gated sodium channel activity]
GO:0005249 [voltage-gated potassium channel activity]
GO:0005267 [potassium channel activity]
GO:0005272 [sodium channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006813 [potassium ion transport]
GO:0006814 [sodium ion transport]
GO:0006936 [muscle contraction]
GO:0008015 [blood circulation]
GO:0016020 [membrane]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0030552 [cAMP binding]
GO:0034765 [regulation of ion transmembrane transport]
GO:0035725 [sodium ion transmembrane transport]
GO:0042391 [regulation of membrane potential]
GO:0042802 [identical protein binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0055085 [transmembrane transport]
GO:0055117 [regulation of cardiac muscle contraction]
GO:0071320 [cellular response to cAMP]
GO:0071321 [cellular response to cGMP]
GO:0071805 [potassium ion transmembrane transport]
GO:0086012 [membrane depolarization during cardiac muscle cell action potential]
GO:0086015 [SA node cell action potential]
GO:0086041 [voltage-gated potassium channel activity involved in SA node cell action potential depolarization]
GO:0086046 [membrane depolarization during SA node cell action potential]
GO:0086091 [regulation of heart rate by cardiac conduction]
GO:0098719 [sodium ion import across plasma membrane]
GO:0098855 [HCN channel complex]
GO:0098907 [regulation of SA node cell action potential]
GO:0098909 [regulation of cardiac muscle cell action potential involved in regulation of contraction]
GO:0110165 [cellular anatomical entity]
GO:1990573 [potassium ion import across plasma membrane]
GO:2001257 [regulation of cation channel activity]
Show all
1203 aa
129 kDa
No 5

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