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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:160.1 nTPM
HPA Brain:348.8 nTPM
GTEx:160.1 nTPM
FANTOM5:502.2 Scaled Tags Per Million
Pig:730.8 nTPM
Mouse:1526.2 nTPM
Allen mouse:21.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012778Antibody CAB018581
Glial cells Not detectedLow
Neuronal cells HighHigh



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

348.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 345.5
2846 Female, age 79, unknown 492.4
1857 Female, age 85, left hemisphere 484.4
2290 Female, age 72, unknown 432.2
1854 Male, age 80, left hemisphere 415.5
1781 Male, age 74, unknown 348.4
2288 Male, age 75, left hemisphere 214.9
2289 Male, age 61, right hemisphere 207.8
2481 Female, age 94, left hemisphere 168.4
Globus pallidus, externus
nTPM: 55.6
2395 Male, age 75, both hemispheres 84.3
2772 Female, age 79, unknown 55.2
2646 Male, age 61, right hemisphere 51.6
1996 Male, age 80, right hemisphere 49.1
2567 Female, age 72, unknown 37.7
Globus pallidus, internus
nTPM: 53.1
2483 Female, age 94, right hemisphere 116.1
2287 Male, age 75, right hemisphere 67.2
2566 Female, age 72, unknown 41.9
2778 Female, age 91, both hemispheres 41.3
2037 Male, age 80, right hemisphere 39.1
1818 Male, age 74, unknown 39.0
2111 Female, age 85, right hemisphere 26.9
Nucleus accumbens
nTPM: 314.6
1856 Female, age 91, right hemisphere 507.1
1783 Male, age 74, unknown 452.8
1806 Female, age 85, left hemisphere 397.4
2824 Male, age 61, right hemisphere 380.2
2698 Female, age 72, unknown 315.9
2286 Male, age 75, left hemisphere 209.7
2391 Female, age 94, left hemisphere 145.3
2732 Male, age 80, right hemisphere 108.2
Nucleus basalis of Meynert
nTPM: 193.2
2393 Male, age 80, right hemisphere 320.9
2484 Female, age 94, left hemisphere 255.4
2821 Male, age 75, both hemispheres 140.6
2569 Male, age 61, both hemispheres 55.7
Nucleus of the diagonal band
nTPM: 169.5
1812 Female, age 91, both hemispheres 215.7
2029 Male, age 61, right hemisphere 199.0
2775 Male, age 80, right hemisphere 165.6
1979 Male, age 74, unknown 139.7
2195 Female, age 85, both hemispheres 127.7
Putamen
nTPM: 348.8
1838 Male, age 80, right hemisphere 543.7
2466 Female, age 79, unknown 512.6
1829 Male, age 74, unknown 468.3
1937 Female, age 91, right hemisphere 419.8
2489 Female, age 72, unknown 199.1
2482 Female, age 94, left hemisphere 171.9
2647 Male, age 75, left hemisphere 126.2
Septal nuclei
nTPM: 141.6
2031 Female, age 72, unknown 221.6
2009 Female, age 91, both hemispheres 168.4
1960 Male, age 74, unknown 147.9
2629 Female, age 94, right hemisphere 144.0
2199 Male, age 80, right hemisphere 116.4
2059 Female, age 85, both hemispheres 99.6
2394 Male, age 61, left hemisphere 93.0
Stria terminalis, bed nucleus
nTPM: 150.1
2486 Female, age 94, both hemispheres 192.5
1974 Female, age 91, both hemispheres 187.1
2201 Male, age 74, unknown 70.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 160.1
Samples: 246

Max nTPM: 568.5
Min nTPM: 21.1
Std nTPM: 80.7
Median nTPM: 160.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 568.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 352.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 351.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 313.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 312.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 311.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 306.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 306.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 301.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 294.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 294.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 289.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 289.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 284.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 282.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 281.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 280.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 279.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 272.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 272.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 271.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 271.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 267.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 266.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 265.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 265.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 258.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 256.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 255.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 255.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 252.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 250.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 245.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 245.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 243.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 241.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 241.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 240.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 240.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 240.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 239.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 238.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 237.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 234.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 232.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 232.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 231.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 231.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 229.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 228.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 226.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 225.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 224.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 220.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 219.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 219.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 218.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 216.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 215.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 214.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 213.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 213.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 212.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 211.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 210.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 210.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 208.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 208.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 207.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 206.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 206.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 205.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 205.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 204.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 203.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 203.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 203.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 202.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 202.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 201.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 201.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 200.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 200.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 199.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 198.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 198.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 194.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 193.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 193.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 193.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 191.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 191.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 189.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 188.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 187.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 187.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 187.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 185.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 184.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 183.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 182.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 181.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 181.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 178.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 178.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 177.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 177.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 176.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 176.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 173.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 173.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 172.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 172.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 172.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 171.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 171.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 171.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 165.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 162.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 162.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 161.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 161.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 159.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 153.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 153.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 153.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 153.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 152.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 152.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 152.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 150.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 150.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 147.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 146.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 146.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 146.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 146.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 144.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 144.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 143.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 142.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 140.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 139.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 137.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 137.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 136.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 136.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 131.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 130.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 130.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 130.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 129.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 128.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 128.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 126.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 125.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 124.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 123.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 122.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 122.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 122.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 122.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 120.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 120.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 120.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 117.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 116.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 115.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 114.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 113.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 112.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 111.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 108.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 108.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 99.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 98.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 98.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 97.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 96.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 92.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 91.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 91.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 91.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 91.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 89.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 88.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 87.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 86.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 85.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 85.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 84.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 84.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 82.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 81.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 78.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 76.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 73.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 72.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 72.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 72.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 71.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 69.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 68.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 68.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 67.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 66.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 65.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 62.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 60.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 59.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 57.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 57.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 54.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 50.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 50.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 49.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 49.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 46.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 46.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 38.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 38.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 37.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 35.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 32.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 30.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 29.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 28.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 27.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 26.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 22.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 22.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 139.5
Samples: 246

Max nTPM: 283.4
Min nTPM: 16.0
Std nTPM: 62.7
Median nTPM: 151.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 283.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 279.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 274.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 272.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 271.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 270.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 264.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 255.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 251.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 248.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 244.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 244.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 241.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 240.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 226.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 226.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 225.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 223.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 222.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 218.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 218.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 218.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 218.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 214.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 212.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 212.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 211.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 211.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 211.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 210.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 209.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 207.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 204.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 204.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 204.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 202.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 201.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 201.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 199.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 199.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 199.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 199.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 198.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 197.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 196.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 195.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 195.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 194.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 193.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 193.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 191.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 189.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 187.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 186.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 186.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 185.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 184.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 184.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 184.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 184.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 183.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 183.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 182.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 180.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 180.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 180.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 179.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 178.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 178.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 178.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 176.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 176.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 175.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 175.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 173.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 172.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 171.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 171.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 170.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 170.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 168.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 167.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 167.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 167.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 165.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 165.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 164.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 164.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 164.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 164.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 164.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 164.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 163.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 163.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 162.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 162.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 162.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 161.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 161.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 161.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 160.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 160.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 160.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 159.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 159.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 159.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 159.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 158.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 157.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 157.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 157.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 156.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 156.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 155.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 155.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 154.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 154.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 153.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 153.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 153.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 152.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 151.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 151.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 150.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 150.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 150.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 149.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 148.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 148.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 148.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 148.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 147.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 145.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 144.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 144.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 143.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 142.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 141.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 140.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 139.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 138.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 136.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 136.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 134.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 134.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 133.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 133.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 130.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 129.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 128.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 128.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 126.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 124.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 124.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 123.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 123.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 123.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 119.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 118.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 117.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 117.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 117.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 116.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 115.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 115.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 115.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 113.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 112.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 111.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 111.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 109.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 106.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 106.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 102.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 102.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 100.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 97.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 97.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 96.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 94.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 93.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 93.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 93.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 92.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 91.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 87.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 86.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 85.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 84.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 83.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 83.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 81.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 80.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 80.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 80.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 78.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 78.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 76.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 73.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 73.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 70.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 68.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 66.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 66.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 66.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 64.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 62.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 61.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 60.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 60.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 60.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 58.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 58.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 56.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 56.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 54.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 52.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 48.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 46.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 45.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 44.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 43.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 43.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 42.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 41.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 39.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 36.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 35.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 34.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 34.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 32.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 31.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 30.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 29.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 28.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 27.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 24.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 23.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 23.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 21.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 21.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 20.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 19.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 150.4
Samples: 205

Max nTPM: 387.9
Min nTPM: 18.5
Std nTPM: 77.1
Median nTPM: 152.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 387.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 364.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 326.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 317.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 301.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 291.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 287.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 287.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 283.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 278.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 277.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 274.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 272.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 268.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 267.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 264.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 262.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 262.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 259.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 257.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 251.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 251.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 250.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 248.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 243.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 239.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 237.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 236.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 236.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 235.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 232.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 232.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 232.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 231.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 229.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 227.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 225.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 225.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 225.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 224.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 223.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 221.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 221.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 215.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 214.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 211.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 208.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 208.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 205.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 204.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 203.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 203.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 202.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 201.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 201.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 200.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 200.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 200.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 199.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 197.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 193.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 193.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 188.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 187.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 187.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 187.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 185.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 184.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 183.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 182.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 182.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 179.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 178.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 178.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 176.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 175.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 175.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 174.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 174.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 174.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 173.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 171.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 170.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 168.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 167.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 167.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 166.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 165.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 165.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 164.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 163.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 163.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 160.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 160.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 157.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 157.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 156.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 155.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 154.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 154.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 154.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 153.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 152.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 150.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 150.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 148.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 148.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 147.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 145.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 143.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 139.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 138.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 136.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 135.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 133.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 132.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 132.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 130.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 130.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 129.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 129.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 126.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 125.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 124.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 123.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 123.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 121.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 121.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 121.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 121.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 120.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 119.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 118.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 117.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 116.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 116.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 116.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 115.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 114.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 112.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 107.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 106.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 104.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 103.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 103.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 102.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 102.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 98.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 98.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 97.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 96.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 96.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 94.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 93.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 92.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 89.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 87.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 74.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 74.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 73.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 72.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 70.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 67.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 66.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 66.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 66.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 64.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 64.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 63.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 63.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 58.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 58.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 56.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 56.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 53.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 51.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 51.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 50.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 50.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 47.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 45.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 44.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 43.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 43.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 43.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 43.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 43.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 42.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 41.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 39.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 38.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 37.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 35.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 35.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 34.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 34.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 31.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 30.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 23.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 22.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 22.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 18.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

502.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 308.6
FF:10164-103B2 76 years, female 308.6
Nucleus accumbens
Scaled Tags Per Million: 358.1
FF:10037-101F1 23-56 years, mixed 358.1
Putamen
Scaled Tags Per Million: 502.2
FF:10176-103C5 60 years, female 502.2
Globus pallidus
Scaled Tags Per Million: 134.3
FF:10175-103C4 60 years, female 211.1
FF:10161-103A8 76 years, female 57.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

730.8
Pig sample Sample description nTPM
Caudate
nTPM: 644.3
Samples: 4

Max nTPM: 767.1
Min nTPM: 567.4
Sample A Female 567.4
Sample B Female 587.4
Sample C Male 767.1
Sample D Male 655.2
Putamen
nTPM: 730.9
Samples: 4

Max nTPM: 1207.9
Min nTPM: 277.2
Sample A Female 277.2
Sample B Female 724.1
Sample C Male 1207.9
Sample D Male 714.2
Septum
nTPM: 249.8
Samples: 4

Max nTPM: 359.4
Min nTPM: 90.1
Sample A Female 359.4
Sample B Female 313.1
Sample C Male 90.1
Sample D Male 236.4
Ventral pallidum
nTPM: 363.4
Samples: 4

Max nTPM: 520.3
Min nTPM: 127.2
Sample A Female 520.3
Sample B Female 397.9
Sample C Male 127.2
Sample D Male 408.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1526.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1526.3
Samples: 4

Max nTPM: 1736.1
Min nTPM: 1299.7
Sample A Male 1736.1
Sample B Male 1613.8
Sample C Female 1299.7
Sample D Female 1455.4
Septum
nTPM: 504.9
Samples: 4

Max nTPM: 605.5
Min nTPM: 404.3
Sample A Male 404.3
Sample B Male 605.5
Sample C Female 466.9
Sample D Female 543.0
Ventral forebrain
nTPM: 748.3
Samples: 4

Max nTPM: 772.8
Min nTPM: 708.7
Sample A Male 772.8
Sample B Male 746.5
Sample C Female 765.3
Sample D Female 708.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 21.2
69817246 Antisense, RP_050510_02_H10, Mouse strain C57BL/6J (56 days, male) 22.7
73817435 Antisense, RP_051101_01_A11, Mouse strain C57BL/6J (56 days, male) 19.8
Pallidum
Expression energy: 9.0
69817246 Antisense, RP_050510_02_H10, Mouse strain C57BL/6J (56 days, male) 13.6
73817435 Antisense, RP_051101_01_A11, Mouse strain C57BL/6J (56 days, male) 4.4

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