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PEX5
HPA
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  • SUMMARY

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  • STRUCT & INT

  • PEX5
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PEX5
Synonyms PTS1R, PXR1
Gene descriptioni

Full gene name according to HGNC.

Peroxisomal biogenesis factor 5
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband p13.31
Chromosome location (bp) 7188685 - 7218574
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

17
Ensembl ENSG00000139197 (version 109)
Entrez gene 5830
HGNC HGNC:9719
UniProt P50542 (UniProt - Evidence at protein level)
neXtProt NX_P50542
GeneCards PEX5
Antibodypedia PEX5 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Receptor that mediates peroxisomal import of proteins containing a C-terminal PTS1-type tripeptide peroxisomal targeting signal (SKL-type) 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11. Binds to cargo proteins containing a PTS1 peroxisomal targeting signal in the cytosol, and translocates them into the peroxisome matrix by passing through the PEX13-PEX14 docking complex along with cargo proteins 12, 13, 14, 15. PEX5 receptor is then retrotranslocated into the cytosol, leading to release of bound cargo in the peroxisome matrix, and reset for a subsequent peroxisome import cycle 16, 17.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein transport, Translocation, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

The product of this gene binds to the C-terminal PTS1-type tripeptide peroxisomal targeting signal (SKL-type) and plays an essential role in peroxisomal protein import. Peroxins (PEXs) are proteins that are essential for the assembly of functional peroxisomes. The peroxisome biogenesis disorders (PBDs) are a group of genetically heterogeneous autosomal recessive, lethal diseases characterized by multiple defects in peroxisome function. The peroxisomal biogenesis disorders are a heterogeneous group with at least 14 complementation groups and with more than 1 phenotype being observed in cases falling into particular complementation groups. Although the clinical features of PBD patients vary, cells from all PBD patients exhibit a defect in the import of one or more classes of peroxisomal matrix proteins into the organelle. Defects in this gene are a cause of neonatal adrenoleukodystrophy (NALD), a cause of Zellweger syndrome (ZWS) as well as may be a cause of infantile Refsum disease (IRD). Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Oct 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PEX5-201
ENSP00000266563
ENST00000266563
P50542
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
A0A0S2Z4F3
[Target identity:100%; Query identity:100%] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000268 [peroxisome targeting sequence binding]
GO:0000425 [pexophagy]
GO:0005052 [peroxisome matrix targeting signal-1 binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005782 [peroxisomal matrix]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0006625 [protein targeting to peroxisome]
GO:0008022 [protein C-terminus binding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016558 [protein import into peroxisome matrix]
GO:0016560 [protein import into peroxisome matrix, docking]
GO:0016561 [protein import into peroxisome matrix, translocation]
GO:0016562 [protein import into peroxisome matrix, receptor recycling]
GO:0019899 [enzyme binding]
GO:0031267 [small GTPase binding]
GO:0031333 [negative regulation of protein-containing complex assembly]
GO:0032991 [protein-containing complex]
GO:0033328 [peroxisome membrane targeting sequence binding]
GO:0044183 [protein folding chaperone]
GO:0044721 [protein import into peroxisome matrix, substrate release]
GO:0045046 [protein import into peroxisome membrane]
GO:0047485 [protein N-terminus binding]
GO:0140597 [protein carrier chaperone]
Show all
602 aa
66.8 kDa
No 0
PEX5-202
ENSP00000266564
ENST00000266564
P50542
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
A0A0S2Z480
[Target identity:100%; Query identity:100%] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000268 [peroxisome targeting sequence binding]
GO:0000425 [pexophagy]
GO:0005052 [peroxisome matrix targeting signal-1 binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005782 [peroxisomal matrix]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016558 [protein import into peroxisome matrix]
GO:0016560 [protein import into peroxisome matrix, docking]
GO:0016562 [protein import into peroxisome matrix, receptor recycling]
GO:0019899 [enzyme binding]
GO:0031267 [small GTPase binding]
GO:0031333 [negative regulation of protein-containing complex assembly]
GO:0032991 [protein-containing complex]
GO:0033328 [peroxisome membrane targeting sequence binding]
GO:0044183 [protein folding chaperone]
GO:0044721 [protein import into peroxisome matrix, substrate release]
GO:0045046 [protein import into peroxisome membrane]
GO:0047485 [protein N-terminus binding]
GO:0140597 [protein carrier chaperone]
Show all
631 aa
69.9 kDa
No 0
PEX5-203
ENSP00000379877
ENST00000396637
J3KPV0
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0016020 [membrane]
Show all
410 aa
45.9 kDa
No 0
PEX5-204
ENSP00000391601
ENST00000412720
B4E0T2
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0016020 [membrane]
Show all
660 aa
73.2 kDa
No 0
PEX5-205
ENSP00000410159
ENST00000420616
P50542
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
A0A0S2Z4H1
[Target identity:100%; Query identity:100%] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000268 [peroxisome targeting sequence binding]
GO:0000425 [pexophagy]
GO:0005052 [peroxisome matrix targeting signal-1 binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005782 [peroxisomal matrix]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0006625 [protein targeting to peroxisome]
GO:0008022 [protein C-terminus binding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016558 [protein import into peroxisome matrix]
GO:0016560 [protein import into peroxisome matrix, docking]
GO:0016562 [protein import into peroxisome matrix, receptor recycling]
GO:0019899 [enzyme binding]
GO:0031267 [small GTPase binding]
GO:0031333 [negative regulation of protein-containing complex assembly]
GO:0032991 [protein-containing complex]
GO:0033328 [peroxisome membrane targeting sequence binding]
GO:0044183 [protein folding chaperone]
GO:0044721 [protein import into peroxisome matrix, substrate release]
GO:0045046 [protein import into peroxisome membrane]
GO:0047485 [protein N-terminus binding]
GO:0051262 [protein tetramerization]
GO:0140597 [protein carrier chaperone]
Show all
639 aa
70.9 kDa
No 0
PEX5-206
ENSP00000407401
ENST00000434354
P50542
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000268 [peroxisome targeting sequence binding]
GO:0000425 [pexophagy]
GO:0005052 [peroxisome matrix targeting signal-1 binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005782 [peroxisomal matrix]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016558 [protein import into peroxisome matrix]
GO:0016560 [protein import into peroxisome matrix, docking]
GO:0016562 [protein import into peroxisome matrix, receptor recycling]
GO:0019899 [enzyme binding]
GO:0031267 [small GTPase binding]
GO:0031333 [negative regulation of protein-containing complex assembly]
GO:0032991 [protein-containing complex]
GO:0033328 [peroxisome membrane targeting sequence binding]
GO:0044183 [protein folding chaperone]
GO:0044721 [protein import into peroxisome matrix, substrate release]
GO:0045046 [protein import into peroxisome membrane]
GO:0047485 [protein N-terminus binding]
GO:0140597 [protein carrier chaperone]
Show all
654 aa
72.3 kDa
No 0
PEX5-207
ENSP00000400647
ENST00000455147
P50542
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
A0A0S2Z4H1
[Target identity:100%; Query identity:100%] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000268 [peroxisome targeting sequence binding]
GO:0000425 [pexophagy]
GO:0005052 [peroxisome matrix targeting signal-1 binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005782 [peroxisomal matrix]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0006625 [protein targeting to peroxisome]
GO:0008022 [protein C-terminus binding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016558 [protein import into peroxisome matrix]
GO:0016560 [protein import into peroxisome matrix, docking]
GO:0016562 [protein import into peroxisome matrix, receptor recycling]
GO:0019899 [enzyme binding]
GO:0031267 [small GTPase binding]
GO:0031333 [negative regulation of protein-containing complex assembly]
GO:0032991 [protein-containing complex]
GO:0033328 [peroxisome membrane targeting sequence binding]
GO:0044183 [protein folding chaperone]
GO:0044721 [protein import into peroxisome matrix, substrate release]
GO:0045046 [protein import into peroxisome membrane]
GO:0047485 [protein N-terminus binding]
GO:0051262 [protein tetramerization]
GO:0140597 [protein carrier chaperone]
Show all
639 aa
70.9 kDa
No 0
PEX5-209
ENSP00000445630
ENST00000536841
F5H205
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
114 aa
12.3 kDa
No 0
PEX5-210
ENSP00000441553
ENST00000536883
F5GZ41
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
Show all
115 aa
13.2 kDa
No 0
PEX5-211
ENSP00000437938
ENST00000537873
F5H637
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
168 aa
18.6 kDa
No 0
PEX5-213
ENSP00000438494
ENST00000540398
F5H432
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
102 aa
11.1 kDa
No 0
PEX5-215
ENSP00000439025
ENST00000542539
F5H3X7
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
Show all
248 aa
27.4 kDa
No 0
PEX5-216
ENSP00000438772
ENST00000543974
F5H0L9
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
Show all
118 aa
13.6 kDa
No 0
PEX5-217
ENSP00000440833
ENST00000544456
F5GXX3
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
104 aa
11.3 kDa
No 0
PEX5-219
ENSP00000443500
ENST00000545574
F5H5C0
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
Show all
272 aa
30.6 kDa
No 0
PEX5-220
ENSP00000440711
ENST00000545845
F5GYB4
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
Show all
128 aa
14.6 kDa
No 0
PEX5-221
ENSP00000502374
ENST00000675855
P50542
[Direct mapping] Peroxisomal targeting signal 1 receptor
Show all
A0A0S2Z4H1
[Target identity:100%; Query identity:100%] Peroxisomal targeting signal 1 receptor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Peroxisomal diseases
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000038 [very long-chain fatty acid metabolic process]
GO:0000268 [peroxisome targeting sequence binding]
GO:0000425 [pexophagy]
GO:0001764 [neuron migration]
GO:0005052 [peroxisome matrix targeting signal-1 binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005782 [peroxisomal matrix]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0006457 [protein folding]
GO:0006625 [protein targeting to peroxisome]
GO:0006635 [fatty acid beta-oxidation]
GO:0007005 [mitochondrion organization]
GO:0007006 [mitochondrial membrane organization]
GO:0007029 [endoplasmic reticulum organization]
GO:0007031 [peroxisome organization]
GO:0008022 [protein C-terminus binding]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016558 [protein import into peroxisome matrix]
GO:0016560 [protein import into peroxisome matrix, docking]
GO:0016562 [protein import into peroxisome matrix, receptor recycling]
GO:0019899 [enzyme binding]
GO:0021795 [cerebral cortex cell migration]
GO:0021895 [cerebral cortex neuron differentiation]
GO:0031267 [small GTPase binding]
GO:0031333 [negative regulation of protein-containing complex assembly]
GO:0032991 [protein-containing complex]
GO:0033328 [peroxisome membrane targeting sequence binding]
GO:0040018 []
GO:0044183 [protein folding chaperone]
GO:0044255 [cellular lipid metabolic process]
GO:0044721 [protein import into peroxisome matrix, substrate release]
GO:0045046 [protein import into peroxisome membrane]
GO:0047485 [protein N-terminus binding]
GO:0048468 [cell development]
GO:0050905 [neuromuscular process]
GO:0051262 [protein tetramerization]
GO:0140597 [protein carrier chaperone]
Show all
639 aa
70.9 kDa
No 0

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