HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:35.5 nTPM
HPA Brain:109.4 nTPM
GTEx:35.5 nTPM
FANTOM5:63.6 Scaled Tags Per Million
Pig:124.6 nTPM
Mouse:91.8 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021213Antibody CAB004321
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 109.4
Sample id Sample description nTPM
Hippocampus
nTPM: 101.3
2529 Female, age 94, left hemisphere 117.1
2621 Female, age 67, right hemisphere 116.4
2148 Female, age 91, left hemisphere 98.1
1898 Male, age 80, left hemisphere 95.4
1855 Male, age 76, left hemisphere 92.4
1911 Female, age 85, right hemisphere 88.2
Dentate gyrus
nTPM: 93.9
2530 Female, age 94, left hemisphere 109.5
2531 Female, age 67, both hemispheres 107.8
2246 Female, age 85, both hemispheres 91.8
1927 Female, age 91, both hemispheres 89.7
2010 Male, age 76, both hemispheres 86.7
2528 Male, age 74, both hemispheres 77.6
Entorhinal gyrus
nTPM: 105.6
2686 Male, age 75, right hemisphere 115.9
2613 Female, age 94, left hemisphere 110.1
2764 Male, age 80, right hemisphere 106.1
1787 Male, age 76, left hemisphere 104.4
1938 Female, age 85, left hemisphere 103.6
2117 Female, age 91, right hemisphere 93.4
Hippocampus, CA1
nTPM: 91.0
2045 Male, age 76, both hemispheres 95.3
2527 Male, age 74, both hemispheres 91.8
2749 Male, age 80, left hemisphere 90.7
1873 Female, age 85, both hemispheres 90.2
2082 Female, age 91, right hemisphere 87.2
Hippocampus, CA2
nTPM: 93.2
1963 Male, age 80, left hemisphere 101.7
1892 Male, age 76, both hemispheres 98.6
2437 Female, age 94, left hemisphere 98.3
1940 Female, age 85, left hemisphere 94.0
2113 Female, age 91, right hemisphere 91.0
2249 Male, age 74, both hemispheres 75.4
Hippocampus, CA3
nTPM: 94.3
2861 Female, age 67, both hemispheres 111.9
2620 Female, age 94, left hemisphere 111.1
2137 Male, age 80, left hemisphere 93.6
1867 Male, age 76, both hemispheres 92.0
1891 Female, age 85, both hemispheres 90.9
2436 Male, age 74, both hemispheres 66.3
Parahippocampal cortex
nTPM: 102.5
2245 Female, age 91, both hemispheres 118.0
2622 Female, age 67, right hemisphere 116.2
1850 Male, age 80, both hemispheres 112.1
2532 Female, age 72, left hemisphere 107.7
2692 Male, age 74, both hemispheres 98.6
2018 Male, age 76, both hemispheres 97.0
1990 Female, age 91, right hemisphere 96.9
1933 Female, age 85, both hemispheres 94.3
2693 Female, age 94, both hemispheres 92.5
2250 Female, age 67, right hemisphere 92.2
Perirhinal gyrus
nTPM: 109.4
1794 Male, age 80, right hemisphere 121.6
2848 Male, age 76, right hemisphere 114.7
1841 Female, age 85, right hemisphere 110.8
1847 Female, age 91, left hemisphere 106.7
2521 Female, age 94, right hemisphere 93.2
Subiculum
nTPM: 92.5
2619 Male, age 74, both hemispheres 100.9
2438 Female, age 94, left hemisphere 98.9
1977 Female, age 85, both hemispheres 94.3
2729 Female, age 91, right hemisphere 90.0
1901 Male, age 80, both hemispheres 86.9
2042 Male, age 76, both hemispheres 84.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.5
Samples: 197

Max nTPM: 69.3
Min nTPM: 11.5
Std nTPM: 9.2
Median nTPM: 35.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 69.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 59.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 58.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 55.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 55.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 55.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 54.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 53.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 52.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 51.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 51.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 63.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.6
FF:10153-102I9 76 years, female 81.6
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 124.6
Pig sample Sample description nTPM
Subiculum
nTPM: 118.2
Samples: 4

Max nTPM: 155.9
Min nTPM: 92.8
Sample A Female 155.9
Sample B Female 113.3
Sample C Male 110.6
Sample D Male 92.8
Dorsal hippocampus
nTPM: 108.4
Samples: 4

Max nTPM: 120.7
Min nTPM: 85.3
Sample A Female 119.1
Sample B Female 108.4
Sample C Male 120.7
Sample D Male 85.3
Entorhinal cortex
nTPM: 124.6
Samples: 4

Max nTPM: 132.1
Min nTPM: 112.1
Sample A Female 126.9
Sample B Female 127.3
Sample C Male 132.1
Sample D Male 112.1
Ventral hippocampus
nTPM: 110.2
Samples: 4

Max nTPM: 138.4
Min nTPM: 93.0
Sample A Female 94.7
Sample B Female 93.0
Sample C Male 138.4
Sample D Male 114.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 91.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.8
Samples: 4

Max nTPM: 94.5
Min nTPM: 89.3
Sample A Male 93.0
Sample B Male 94.5
Sample C Female 90.5
Sample D Female 89.3
Hippocampal formation
nTPM: 84.9
Samples: 4

Max nTPM: 90.9
Min nTPM: 81.5
Sample A Male 81.5
Sample B Male 90.9
Sample C Female 83.4
Sample D Female 83.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69444723 Antisense, RP_050414_04_D12, Mouse strain C57BL/6J (56 days, male) 7.5

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