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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Medium
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: High
Purkinje cells - cytoplasm/membrane: Medium
Purkinje cells - dendrites: Medium
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.2 nTPM
HPA Brain:63.2 nTPM
GTEx:71.2 nTPM
FANTOM5:76.8 Scaled Tags Per Million
Pig:27.8 nTPM
Mouse:78.8 nTPM
Allen mouse:7.8 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039936
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Medium
Purkinje cells - dendrites Medium
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Medium
Granular cells - nucleus Not detected
Molecular layer - neuropil Low
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter High
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 62.6
1769 Male, age 76, right hemisphere 80.0
1774 Male, age 80, left hemisphere 73.4
1768 Female, age 72, unknown 72.7
1788 Male, age 55, unknown 64.4
2101 Male, age 74, right hemisphere 61.9
2006 Male, age 61, right hemisphere 55.7
2055 Female, age 91, right hemisphere 54.5
2003 Female, age 85, right hemisphere 38.0
Cerebellar nuclei
nTPM: 25.5
2177 Female, age 85, both hemispheres 33.8
2882 Male, age 76, left hemisphere 29.4
2318 Male, age 74, left hemisphere 28.5
1966 Female, age 91, left hemisphere 27.2
2783 Female, age 72, unknown 23.8
1879 Male, age 55, unknown 22.6
1871 Male, age 74, unknown 22.1
2005 Male, age 80, left hemisphere 21.9
2175 Male, age 61, right hemisphere 19.9
Flocculonodular lobe
nTPM: 63.2
1767 Male, age 76, left hemisphere 75.4
1765 Male, age 55, unknown 69.2
1771 Male, age 80, left hemisphere 68.0
1792 Male, age 74, unknown 64.3
2176 Female, age 91, right hemisphere 60.7
2004 Male, age 61, right hemisphere 55.9
1835 Female, age 85, right hemisphere 49.1
Vermis
nTPM: 61.1
1770 Male, age 76, left hemisphere 82.3
1988 Female, age 85, left hemisphere 69.1
1825 Male, age 74, unknown 66.9
1928 Female, age 72, unknown 63.5
2460 Male, age 61, both hemispheres 58.9
1778 Female, age 91, left hemisphere 57.9
1751 Male, age 74, right hemisphere 54.9
1766 Male, age 55, unknown 50.7
2834 Male, age 80, left hemisphere 46.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 61.7
Samples: 215

Max nTPM: 107.7
Min nTPM: 16.7
Std nTPM: 14.6
Median nTPM: 64.4
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 107.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 91.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 88.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 88.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 88.2
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 88.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 87.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 86.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 85.6
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 84.6
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 83.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 83.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 82.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 82.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 81.7
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 80.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 79.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 79.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 79.3
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 78.2
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 78.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 77.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 77.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 76.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 76.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 76.2
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 76.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 75.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 75.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 75.7
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 74.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 74.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 74.4
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 74.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 74.1
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 74.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 74.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 73.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 73.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 73.4
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 73.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 73.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 72.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 72.7
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 72.6
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 72.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 72.1
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 72.1
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 72.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 72.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 71.6
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 71.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 71.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 71.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 71.5
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 71.4
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 71.3
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 71.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 71.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 70.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 70.6
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 70.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 69.8
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 69.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 69.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 69.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 69.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 69.2
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 69.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 69.1
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 68.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 68.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 68.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 68.7
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 68.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 68.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 68.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 68.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 68.1
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 67.8
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 67.8
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 67.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 67.6
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 67.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 67.3
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 67.1
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 67.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 66.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 66.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 66.5
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 66.4
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 66.4
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 66.0
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 65.9
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 65.8
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 65.8
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 65.6
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 65.5
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 65.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 65.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 65.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 65.1
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 64.9
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 64.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 64.6
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 64.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 64.5
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 64.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 64.1
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 63.9
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 63.6
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 63.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 63.4
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 62.9
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 62.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 62.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 62.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 62.5
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 62.1
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 61.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 61.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 61.3
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 61.2
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 60.7
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 60.4
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 60.1
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 60.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 59.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 59.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 59.5
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 59.4
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 59.4
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 59.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 58.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 58.7
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 58.7
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 58.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 58.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 58.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 58.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 58.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 57.9
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 57.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 57.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 57.4
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 57.0
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 56.7
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 56.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 56.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 56.6
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 56.5
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 56.1
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 55.7
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 55.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 55.5
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 55.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 55.3
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 54.6
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 54.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 53.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 53.4
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 53.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 53.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 53.1
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 52.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 52.3
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 52.0
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 51.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 51.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 51.1
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 50.2
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 50.2
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 49.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 49.2
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 48.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 48.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 48.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 48.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 47.5
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 47.4
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 47.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 47.0
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 46.4
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 46.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 45.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 45.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 45.0
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 44.6
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 44.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 44.2
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 43.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 43.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 43.3
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 42.7
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 41.9
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 41.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 40.8
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 40.2
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 39.2
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 38.9
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 37.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 35.6
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 34.3
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 34.1
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 32.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 31.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 31.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 28.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 27.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 27.0
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 26.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 25.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 24.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 22.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 16.7
Show allShow less
Brain - Cerebellum
Average nTPM: 71.2
Samples: 241

Max nTPM: 105.3
Min nTPM: 27.9
Std nTPM: 16.4
Median nTPM: 73.4
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 105.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 103.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 99.0
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 98.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 98.1
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 97.9
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 97.8
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 97.5
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 97.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 96.9
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 96.7
GTEX-WL46-2826-SM-3LK81 50-59 years, male 96.4
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 95.5
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 95.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 94.9
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 94.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 94.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 93.4
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 93.4
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 93.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 93.2
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 92.3
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 92.0
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 91.8
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 91.6
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 91.1
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 90.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 90.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 89.8
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 89.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 88.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 88.8
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 88.7
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 88.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 88.4
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 87.7
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 86.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 86.7
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 86.7
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 86.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 86.4
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 86.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 86.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 86.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 85.6
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 85.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 85.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 85.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 85.1
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 84.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 84.1
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 84.0
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 83.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 83.7
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 83.4
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 83.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 82.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 82.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 82.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 82.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 82.1
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 81.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 81.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 81.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 81.4
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 81.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 81.3
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 81.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 81.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 80.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 80.8
GTEX-145LS-3026-SM-5O99S 60-69 years, female 80.8
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 80.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 80.5
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 80.5
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 80.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 80.4
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 80.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 80.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 80.0
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 79.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 79.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 79.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 78.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 78.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 78.5
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 78.5
GTEX-14E6D-2926-SM-664OP 50-59 years, male 78.4
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 78.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 77.7
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 77.6
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 77.6
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 77.5
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 77.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 77.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 77.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 77.3
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 77.2
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 77.2
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 77.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 76.9
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 76.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 76.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 76.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 76.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 76.5
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 76.4
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 76.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 75.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 75.4
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 75.2
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 75.1
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 74.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 74.7
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 74.2
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 74.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 74.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 74.1
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 74.0
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 73.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 73.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 73.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 73.2
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 73.2
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 73.0
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 72.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 72.7
GTEX-18465-2926-SM-7KFSE 50-59 years, male 72.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 72.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 72.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 72.5
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 72.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 72.4
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 72.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 72.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 71.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 71.8
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 71.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 71.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 70.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 70.8
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 70.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 70.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 69.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 69.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 68.8
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 68.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 68.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 68.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 67.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 67.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 67.6
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 67.6
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 67.4
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 67.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 67.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 67.0
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 66.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 66.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 66.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 65.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 65.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 65.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 64.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 64.7
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 64.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 64.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 64.1
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 64.0
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 63.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 62.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 62.7
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 62.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 62.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 62.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 62.3
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 62.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 61.8
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 61.6
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 61.5
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 61.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 61.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 61.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 60.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 60.6
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 60.5
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 60.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 60.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 60.1
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 58.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 58.5
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 58.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 58.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 57.9
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 57.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 57.8
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 56.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 56.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 56.0
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 55.8
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 55.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 55.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 55.0
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 55.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 54.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 54.2
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 53.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 53.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 52.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 52.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 51.5
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 50.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 49.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 49.6
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 48.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 48.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 48.1
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 47.5
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 47.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 47.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 46.6
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 46.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 45.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 44.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 44.3
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 42.1
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 38.6
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 37.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 36.2
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 36.1
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 35.2
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 34.9
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 34.8
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 34.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 34.3
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 33.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 31.3
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 31.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 29.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 28.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 27.9
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

76.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 76.8
FF:10083-102B2 22-68 years, mixed 84.4
FF:10166-103B4 76 years, female 69.2

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 27.8
Samples: 4

Max nTPM: 35.9
Min nTPM: 23.4
Sample A Female 35.9
Sample B Female 26.1
Sample C Male 23.4
Sample D Male 25.6

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.8
Mouse sample Sample description nTPM
Cerebellum
nTPM: 78.8
Samples: 4

Max nTPM: 84.2
Min nTPM: 74.0
Sample A Male 78.5
Sample B Male 74.0
Sample C Female 78.5
Sample D Female 84.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.8
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 7.8
71656802 Antisense, RP_050927_04_D01, Mouse strain C57BL/6J (56 days, male) 7.8

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