Expression of TMBIM6 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TMBIM6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 413.95

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

600.9

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	1946.7
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	1885.1
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	1663.4
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	1408.6
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	1321.1
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	1318.5
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	1311.4
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	1297.5
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	1277.7
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	1236.1
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	1221.6
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	1218.9
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	1218.1
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	1217.9
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	1198.4
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	1134.8
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	1103.8
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	1087.7
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	1082.0
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	1077.7
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	1065.9
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	1041.4
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	1032.3
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	1009.7
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	997.0
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	995.2
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	982.2
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	980.2
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	977.3
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	964.7
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	960.7
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	950.2
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	938.6
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	908.1
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	907.8
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	902.5
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	898.7
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	895.2
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	893.9
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	889.1
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	888.4
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	882.8
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	876.7
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	873.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	872.0
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	865.7
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	858.1
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	857.7
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	848.6
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	847.5
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	845.8
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	841.8
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	839.3
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	835.9
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	828.2
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	822.3
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	818.7
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	817.8
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	814.6
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	811.9
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	809.0
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	808.7
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	808.4
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	800.3
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	797.2
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	796.5
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	795.8
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	792.6
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	791.0
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	782.1
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	780.4
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	779.3
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	778.9
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	778.1
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	777.0
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	776.5
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	768.2
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	757.4
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	754.6
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	753.3
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	751.8
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	748.9
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	748.4
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	740.7
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	739.6
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	739.0
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	736.5
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	735.3
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	735.2
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	733.3
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	732.6
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	730.5
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	730.4
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	729.9
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	728.8
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	727.2
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	724.8
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	723.4
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	721.5
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	720.4
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	718.1
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	715.9
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	708.8
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	706.7
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	706.1
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	704.0
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	703.2
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	699.5
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	693.2
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	693.0
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	692.2
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	683.1
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	681.1
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	678.6
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	674.5
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	667.5
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	667.2
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	666.6
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	666.2
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	665.7
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	659.5
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	657.9
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	657.1
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	653.8
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	651.2
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	649.9
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	649.5
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	649.3
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	643.4
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	641.7
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	640.4
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	640.4
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	638.4
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	638.0
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	637.4
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	636.1
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	635.0
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	634.3
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	632.2
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	631.9
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	631.2
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	628.5
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	626.0
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	625.4
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	623.4
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	623.0
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	620.6
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	620.0
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	619.8
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	619.1
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	611.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	607.5
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	607.2
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	606.8
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	606.3
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	605.5
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	604.9
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	603.5
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	602.5
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	600.2
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	598.8
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	593.1
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	592.0
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	591.8
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	591.3
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	590.8
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	586.1
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	581.0
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	577.5
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	576.1
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	575.4
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	574.5
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	574.1
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	572.0
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	567.5
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	567.3
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	566.9
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	566.8
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	565.1
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	561.8
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	561.4
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	560.7
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	560.7
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	560.5
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	557.4
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	555.7
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	555.5
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	554.0
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	553.6
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	550.5
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	549.4
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	547.1
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	545.8
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	545.4
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	544.7
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	540.4
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	540.2
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	539.8
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	539.1
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	536.3
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	535.3
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	535.3
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	534.1
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	533.8
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	533.1
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	529.1
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	529.1
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	528.3
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	528.1
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	526.1
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	524.0
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	523.6
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	523.6
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	523.1
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	521.2
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	519.4
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	518.3
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	517.4
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	516.0
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	515.7
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	514.9
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	514.8
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	512.5
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	511.3
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	506.8
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	504.6
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	503.6
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	502.3
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	501.1
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	500.7
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	496.6
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	496.0
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	495.3
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	495.1
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	494.3
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	492.8
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	490.5
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	489.4
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	488.1
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	485.7
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	485.5
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	484.5
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	481.0
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	477.9
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	476.3
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	471.7
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	471.5
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	470.9
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	469.6
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	467.2
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	463.9
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	462.7
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	462.5
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	462.3
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	462.3
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	460.6
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	460.3
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	456.9
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	451.0
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	450.7
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	450.7
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	449.7
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	445.8
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	444.8
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	440.9
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	440.0
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	435.7
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	431.3
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	426.3
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	425.7
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	424.4
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	423.7
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	423.2
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	421.5
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	419.5
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	416.2
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	416.0
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	413.9
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	412.8
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	409.9
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	406.8
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	403.4
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	400.7
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	400.3
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	397.5
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	395.8
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	393.0
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	389.2
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	381.9
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	380.6
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	377.7
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	374.5
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	373.5
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	373.2
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	372.0
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	371.6
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	370.2
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	368.0
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	361.2
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	359.8
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	351.2
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	347.0
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	345.1
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	344.6
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	340.8
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	337.2
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	336.8
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	336.3
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	336.1
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	334.6
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	333.2
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	332.3
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	332.1
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	332.0
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	331.5
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	330.3
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	323.5
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	323.3
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	323.1
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	315.8
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	312.9
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	312.3
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	309.5
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	307.8
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	307.4
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	304.6
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	303.8
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	302.2
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	301.1
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	300.6
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	298.6
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	298.5
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	297.1
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	297.1
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	292.8
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	290.0
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	279.1
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	277.6
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	273.6
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	273.5
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	273.1
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	271.0
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	269.7
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	269.5
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	267.4
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	265.9
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	262.7
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	250.0
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	234.3
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	220.4
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	220.0
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	210.6
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	206.6
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	200.9
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	195.8
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	191.8
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	160.0
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	153.0
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	124.9
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	123.8
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	116.2
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	87.4
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

TMBIM6 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 897.22

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

849.6

Number of samples

231

Samples

Sample	Description	pTPM
DO48677	58 years, male, NA, stage:3, alive, 1140 days	2147.0
DO45227	57 years, female, NA, stage:2, alive, 1020 days	2013.7
DO23529	72 years, male, NA, stage:4, alive, 930 days	1833.0
DO50832	73 years, male, NA, stage:3, alive, 90 days	1792.0
DO45119	74 years, male, NA, stage:3, dead, 510 days	1698.5
DO50859	77 years, male, NA, stage:2, alive, 180 days	1670.2
DO45097	69 years, male, NA, stage:3, alive, 1620 days	1646.1
DO23552	80 years, female, NA, stage:1, alive, 810 days	1613.1
DO45129	61 years, male, NA, stage:3, alive, 1470 days	1604.5
DO45113	58 years, male, NA, stage:3, alive, 1560 days	1584.1
DO48672	81 years, male, NA, stage:2, alive, 450 days	1447.0
DO23509	60 years, male, NA, stage:3, dead, 780 days	1429.2
DO45205	67 years, female, NA, stage:2, dead, 90 days	1401.7
DO50829	78 years, male, NA, stage:3, alive, 570 days	1395.6
DO45239	42 years, male, NA, stage:2, alive, 870 days	1372.7
DO23534	60 years, male, NA, stage:2, alive, 840 days	1358.2
DO23533	61 years, male, NA, stage:2, alive, 900 days	1345.8
DO45275	65 years, male, NA, stage:3, dead, 10 days	1320.1
DO45111	74 years, male, NA, stage:2, alive, 1590 days	1306.8
DO48761	55 years, male, NA, stage:2, alive, 870 days	1304.8
DO45171	56 years, male, NA, stage:3, alive, 600 days	1303.3
DO45133	64 years, male, NA, stage:3, dead, 660 days	1297.4
DO45153	77 years, female, NA, stage:2, alive, 1380 days	1277.9
DO23513	76 years, male, NA, stage:3, alive, 1200 days	1274.1
DO23550	69 years, male, NA, stage:1, alive, 990 days	1245.4
DO23535	67 years, male, NA, stage:1, alive, 960 days	1237.5
DO48746	76 years, male, NA, stage:3, alive, 570 days	1235.3
DO45253	50 years, male, NA, stage:2, alive, 870 days	1234.7
DO50787	63 years, male, NA, stage:3, alive, 480 days	1234.6
DO50802	49 years, male, NA, stage:2, alive, 930 days	1226.7
DO23542	66 years, male, NA, stage:3, alive, 960 days	1225.5
DO50818	65 years, male, NA, stage:2, alive, 510 days	1223.2
DO45177	81 years, female, NA, stage:3, alive, 1260 days	1208.1
DO48719	80 years, male, NA, stage:2, alive, 690 days	1205.9
DO48760	70 years, female, NA, stage:2, alive, 690 days	1175.9
DO48757	68 years, female, NA, stage:3, alive, 480 days	1173.5
DO45207	68 years, male, NA, stage:1, alive, 1050 days	1172.6
DO45303	62 years, female, NA, stage:3, alive, 990 days	1160.8
DO45094	76 years, male, NA, stage:3, alive, 1650 days	1159.9
DO50817	75 years, male, NA, stage:2, alive, 390 days	1120.8
DO48751	68 years, male, NA, stage:2, dead, 480 days	1117.7
DO50807	67 years, male, NA, stage:1, alive, 540 days	1116.2
DO50774	68 years, female, NA, stage:2, alive, 720 days	1116.1
DO50789	73 years, female, NA, stage:2, alive, 570 days	1115.1
DO45191	61 years, female, NA, stage:2, alive, 1200 days	1105.0
DO23512	60 years, male, NA, stage:1, alive, 1260 days	1100.9
DO45099	46 years, male, NA, stage:3, alive, 1590 days	1087.9
DO48704	68 years, female, NA, stage:3, alive, 750 days	1087.4
DO48717	54 years, male, NA, stage:4, dead, 180 days	1084.5
DO48723	73 years, male, NA, stage:1, alive, 600 days	1074.9
DO48728	74 years, female, NA, stage:2, alive, 150 days	1068.9
DO48727	81 years, female, NA, stage:2, dead, 390 days	1062.2
DO45092	62 years, male, NA, stage:4, dead, 1200 days	1054.2
DO45107	63 years, female, NA, stage:2, alive, 1710 days	1047.3
DO45201	49 years, male, NA, stage:1, alive, 900 days	1024.9
DO50804	81 years, male, NA, stage:2, alive, 720 days	1023.4
DO23538	67 years, male, NA, stage:2, alive, 450 days	1021.2
DO48695	77 years, male, NA, stage:2, alive, 720 days	1020.6
DO45233	83 years, male, NA, stage:3, alive, 900 days	1019.6
DO45223	67 years, male, NA, stage:4, alive, 1020 days	1018.9
DO45263	67 years, male, NA, stage:3, dead, 270 days	1011.1
DO45217	69 years, female, NA, stage:3, dead, 270 days	1008.6
DO45169	74 years, male, NA, stage:3, alive, 1350 days	1007.2
DO23527	72 years, male, NA, stage:1, alive, 1050 days	997.8
DO50840	49 years, male, NA, stage:2, alive, 330 days	996.5
DO23526	66 years, male, NA, stage:3, alive, 1050 days	996.2
DO23514	64 years, male, NA, stage:2, alive, 1290 days	995.7
DO50822	66 years, male, NA, stage:2, alive, 510 days	987.8
DO45213	58 years, male, NA, stage:1, alive, 1200 days	976.2
DO45189	85 years, female, NA, stage:2, alive, 1200 days	971.6
DO45115	81 years, male, NA, stage:2, alive, 840 days	971.4
DO45299	70 years, female, NA, stage:1, alive, 1440 days	970.3
DO45143	69 years, male, NA, stage:3, alive, 1290 days	961.3
DO227643	79 years, male, NA, stage:2, alive, 1260 days	960.8
DO45235	68 years, female, NA, stage:1, alive, 900 days	952.6
DO48742	76 years, male, NA, stage:2, alive, 600 days	952.4
DO45215	65 years, male, NA, stage:2, alive, 1170 days	952.3
DO45131	53 years, male, NA, stage:4, dead, 360 days	943.5
DO48681	57 years, male, NA, stage:2, alive, 900 days	942.3
DO48716	71 years, male, NA, stage:2, alive, 720 days	936.0
DO48743	69 years, female, NA, stage:2, alive, 570 days	926.5
DO23531	78 years, female, NA, stage:3, alive, 900 days	922.3
DO45197	51 years, male, NA, stage:2, alive, 1170 days	916.0
DO45255	81 years, male, NA, stage:3, alive, 720 days	910.6
DO50816	63 years, male, NA, stage:2, alive, 390 days	909.5
DO48701	78 years, male, NA, stage:2, alive, 780 days	897.2
DO45091	56 years, male, NA, stage:2, dead, 1320 days	886.5
DO50857	72 years, male, NA, stage:2, alive, 210 days	882.8
DO45305	66 years, male, NA, stage:4, alive, 300 days	871.7
DO45245	75 years, female, NA, stage:2, dead, 240 days	869.9
DO50811	62 years, male, NA, stage:1, alive, 450 days	866.3
DO50783	62 years, male, NA, stage:3, alive, 480 days	864.1
DO50844	75 years, male, NA, stage:4, alive, 300 days	860.1
DO45279	67 years, male, NA, stage:3, alive, 1290 days	857.7
DO50850	74 years, male, NA, stage:3, alive, 720 days	856.6
DO50785	37 years, male, NA, stage:4, dead, 90 days	856.6
DO45121	61 years, male, NA, stage:3, alive, 1530 days	854.8
DO48732	73 years, male, NA, stage:3, alive, 630 days	854.1
DO45127	73 years, male, NA, stage:3, dead, 420 days	853.5
DO23540	73 years, male, NA, stage:1, alive, 750 days	852.9
DO45157	62 years, male, NA, stage:2, alive, 1980 days	843.6
DO23510	80 years, female, NA, stage:2, alive, 870 days	842.3
DO48721	58 years, female, NA, stage:1, alive, 900 days	841.5
DO45259	65 years, male, NA, stage:3, alive, 330 days	840.1
DO23539	77 years, male, NA, stage:1, alive, 1110 days	834.8
DO48712	50 years, male, NA, stage:2, alive, 810 days	831.6
DO45269	59 years, male, NA, stage:3, alive, 750 days	826.9
DO45163	76 years, male, NA, stage:2, alive, 960 days	825.6
DO45149	70 years, female, NA, stage:2, alive, 1260 days	825.3
DO23511	83 years, female, NA, stage:3, dead, 180 days	824.1
DO50793	76 years, male, NA, stage:4, alive, 540 days	822.8
DO45225	69 years, male, NA, stage:1, alive, 1050 days	821.9
DO45167	67 years, male, NA, stage:2, dead, 1440 days	815.3
DO48720	62 years, female, NA, stage:2, alive, 570 days	814.1
DO45173	63 years, male, NA, stage:3, alive, 1170 days	804.9
DO45183	72 years, female, NA, stage:2, dead, 570 days	801.3
DO45181	84 years, female, NA, stage:2, alive, 1200 days	797.8
DO45231	84 years, male, NA, stage:2, alive, 930 days	793.7
DO45175	74 years, male, NA, stage:2, alive, 1140 days	786.6
DO45237	58 years, male, NA, stage:2, alive, 900 days	782.8
DO48736	76 years, female, NA, stage:1, alive, 600 days	778.6
DO45123	78 years, female, NA, stage:2, dead, 570 days	773.6
DO45281	83 years, male, NA, stage:4, alive, 750 days	766.8
DO45267	73 years, male, NA, stage:3, dead, 570 days	765.8
DO50791	79 years, female, NA, stage:1, dead, 480 days	765.8
DO45195	62 years, male, NA, stage:1, alive, 390 days	756.8
DO23521	63 years, male, NA, stage:3, alive, 1110 days	756.2
DO48741	64 years, male, NA, stage:3, alive, 240 days	753.6
DO45101	63 years, male, NA, stage:2, alive, 1680 days	747.5
DO227801	77 years, female, NA, stage:1, alive, 660 days	745.3
DO23532	71 years, female, NA, stage:1, alive, 960 days	739.1
DO23546	63 years, male, NA, stage:2, alive, 1050 days	733.7
DO45265	73 years, male, NA, stage:3, alive, 1020 days	733.1
DO50809	56 years, male, NA, stage:3, dead, 720 days	730.4
DO45139	63 years, male, NA, stage:3, alive, 1320 days	724.8
DO50803	62 years, female, NA, stage:1, alive, 540 days	723.8
DO23549	74 years, male, NA, stage:3, alive, 990 days	722.8
DO23525	71 years, male, NA, stage:4, alive, 1050 days	715.1
DO50806	70 years, male, NA, stage:4, alive, 540 days	697.8
DO48700	78 years, female, NA, stage:2, alive, 810 days	695.9
DO45093	71 years, male, NA, stage:2, dead, 720 days	695.4
DO45247	31 years, female, NA, stage:2, alive, 210 days	692.1
DO45297	61 years, female, NA, stage:4, dead, 1260 days	691.2
DO50819	72 years, female, NA, stage:2, alive, 510 days	690.6
DO48674	80 years, male, NA, stage:2, alive, 1260 days	684.9
DO23548	78 years, female, NA, stage:1, alive, 840 days	681.1
DO45243	74 years, female, NA, stage:3, alive, 930 days	679.9
DO48730	73 years, female, NA, stage:2, alive, 630 days	679.6
DO23518	67 years, male, NA, stage:2, alive, 1320 days	677.7
DO23537	79 years, male, NA, stage:2, dead, 900 days	676.9
DO48697	64 years, female, NA, stage:2, dead, 810 days	675.2
DO23543	63 years, male, NA, stage:2, alive, 1020 days	672.7
DO23524	71 years, female, NA, stage:2, alive, 1050 days	666.6
DO45159	65 years, male, NA, stage:3, alive, 1470 days	664.2
DO50799	66 years, female, NA, stage:2, alive, 540 days	663.7
DO23517	62 years, male, NA, stage:2, alive, 1200 days	663.2
DO48733	72 years, male, NA, stage:2, alive, 600 days	659.7
DO45161	74 years, male, NA, stage:2, dead, 540 days	658.1
DO48679	72 years, male, NA, stage:2, alive, 1200 days	654.2
DO50778	60 years, male, NA, stage:4, alive, 630 days	647.2
DO50808	68 years, male, NA, stage:2, alive, 570 days	646.6
DO23545	67 years, male, NA, stage:2, dead, 570 days	644.7
DO50776	75 years, male, NA, stage:1, alive, 690 days	640.1
DO45221	75 years, female, NA, stage:4, dead, 390 days	635.1
DO50845	72 years, male, NA, stage:3, alive, 210 days	631.9
DO48706	72 years, male, NA, stage:2, alive, 870 days	631.5
DO50805	72 years, male, NA, stage:2, alive, 690 days	630.5
DO50800	74 years, male, NA, stage:2, alive, 510 days	627.2
DO50855	47 years, male, NA, stage:2, alive, 570 days	626.1
DO45249	57 years, male, NA, stage:1, alive, 630 days	624.3
DO45095	66 years, male, NA, stage:2, alive, 1620 days	624.1
DO45261	74 years, male, NA, stage:3, alive, 990 days	622.3
DO50825	70 years, male, NA, stage:2, alive, 390 days	621.3
DO23523	52 years, male, NA, stage:3, alive, 1080 days	613.7
DO45287	74 years, male, NA, stage:1, alive, 390 days	613.0
DO23530	53 years, male, NA, stage:4, dead, 180 days	602.1
DO45141	73 years, male, NA, stage:2, alive, 1320 days	600.4
DO48725	66 years, male, NA, stage:1, alive, 780 days	598.9
DO45185	89 years, male, NA, stage:2, alive, 600 days	597.8
DO45203	71 years, female, NA, stage:2, alive, 1170 days	596.1
DO23536	56 years, male, NA, stage:2, alive, 930 days	595.0
DO23515	71 years, male, NA, stage:2, alive, 1230 days	592.8
DO45165	75 years, male, NA, stage:2, alive, 690 days	590.3
DO23516	69 years, male, NA, stage:3, dead, 20 days	588.4
DO23551	73 years, male, NA, stage:3, dead, 150 days	586.8
DO50820	77 years, female, NA, stage:3, alive, 510 days	585.5
DO45137	38 years, male, NA, stage:1, alive, 1320 days	570.3
DO45187	32 years, female, NA, stage:1, alive, 1260 days	568.2
DO48693	71 years, male, NA, stage:2, alive, 900 days	559.9
DO45179	78 years, female, NA, stage:2, alive, 600 days	559.7
DO48715	58 years, female, NA, stage:2, dead, 690 days	559.1
DO45096	69 years, male, NA, stage:2, dead, 1290 days	558.9
DO50813	56 years, male, NA, stage:2, alive, 420 days	553.3
DO45125	58 years, male, NA, stage:3, alive, 1680 days	552.2
DO45135	77 years, male, NA, stage:1, alive, 1410 days	548.2
DO45219	78 years, male, NA, stage:2, alive, 1080 days	546.6
DO45283	60 years, male, NA, stage:3, alive, 510 days	546.1
DO45109	63 years, male, NA, stage:2, alive, 1590 days	540.8
DO45251	57 years, female, NA, stage:2, alive, 900 days	539.8
DO23541	65 years, male, NA, stage:2, alive, 930 days	538.4
DO45307	54 years, female, NA, stage:4, dead, 240 days	537.2
DO50798	77 years, male, NA, stage:3, dead, 30 days	530.2
DO45277	64 years, male, NA, stage:3, alive, 600 days	526.6
DO48759	73 years, male, NA, stage:3, alive, 720 days	524.5
DO45145	78 years, male, NA, stage:3, dead, 60 days	523.8
DO45117	73 years, female, NA, stage:2, dead, 1110 days	509.6
DO45257	46 years, male, NA, stage:3, alive, 810 days	507.6
DO23528	45 years, female, NA, stage:2, alive, 1020 days	497.8
DO23544	67 years, male, NA, stage:2, alive, 960 days	497.5
DO45105	61 years, male, NA, stage:1, alive, 1680 days	493.8
DO45211	76 years, male, NA, stage:3, alive, 240 days	488.8
DO50839	47 years, female, NA, stage:3, alive, 330 days	487.0
DO45155	69 years, male, NA, stage:2, alive, 2160 days	467.8
DO45103	47 years, male, NA, stage:3, alive, 450 days	466.1
DO48682	72 years, female, NA, stage:3, dead, 120 days	461.2
DO45229	74 years, male, NA, stage:1, alive, 990 days	454.8
DO23547	74 years, male, NA, stage:1, alive, 1020 days	454.2
DO23508	79 years, female, NA, stage:2, alive, 390 days	449.9
DO45273	62 years, male, NA, stage:2, alive, 480 days	436.9
DO45193	68 years, female, NA, stage:4, dead, 120 days	436.2
DO45199	86 years, female, NA, stage:2, alive, 1350 days	433.7
DO45289	78 years, female, NA, stage:3, alive, 360 days	421.9
DO50815	62 years, male, NA, stage:3, alive, 150 days	419.1
DO45209	70 years, male, NA, stage:4, alive, 1350 days	410.0
DO23519	65 years, male, NA, stage:3, alive, 630 days	396.3
DO48747	62 years, male, NA, stage:3, alive, 540 days	375.6
DO45301	56 years, male, NA, stage:2, dead, 1440 days	367.0
DO48737	52 years, male, NA, stage:1, alive, 720 days	352.1
DO45241	49 years, male, NA, stage:1, alive, 1080 days	326.4
DO45285	59 years, male, NA, stage:3, alive, 480 days	309.8
DO50814	83 years, male, NA, stage:3, alive, 420 days	225.7
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
128	Normal	1.2
955	Tumor	1.1
867	Tumor	1.1
414	Normal	1.1
426	Normal	1.1
911	Tumor	1.0
298	Normal	1.0
636	Normal	1.0
114	Normal	1.0
627	Tumor	1.0
342	Normal	1.0
376	Normal	1.0
862	Normal	1.0
954	Normal	1.0
466	Normal	0.9
428	Normal	0.9
938	Normal	0.9
468	Normal	0.9
354	Normal	0.9
127	Tumor	0.9
944	Normal	0.9
314	Normal	0.8
392	Normal	0.8
278	Normal	0.8
648	Normal	0.8
358	Normal	0.8
396	Normal	0.8
171	Tumor	0.8
111	Normal	0.8
616	Normal	0.8
332	Normal	0.8
568	Normal	0.8
388	Normal	0.8
465	Tumor	0.8
261	Tumor	0.7
136	Normal	0.7
666	Normal	0.7
148	Normal	0.7
824	Normal	0.7
172	Normal	0.7
878	Normal	0.7
462	Normal	0.7
572	Normal	0.7
344	Normal	0.7
864	Normal	0.7
433	Tumor	0.7
1046	Normal	0.7
744	Normal	0.7
564	Normal	0.7
124	Normal	0.7
563	Tumor	0.6
196	Normal	0.6
866	Normal	0.6
366	Normal	0.6
662	Normal	0.6
356	Normal	0.6
952	Normal	0.6
424	Normal	0.6
352	Normal	0.6
446	Normal	0.6
464	Normal	0.6
362	Normal	0.6
1044	Normal	0.6
432	Normal	0.6
664	Normal	0.6
628	Normal	0.6
138	Normal	0.6
915	Tumor	0.5
452	Normal	0.5
312	Normal	0.5
672	Normal	0.5
444	Normal	0.5
1028	Normal	0.5
642	Normal	0.5
514	Normal	0.5
1041	Tumor	0.5
132	Normal	0.5
1022	Normal	0.5
742	Normal	0.5
964	Normal	0.5
914	Normal	0.5
456	Normal	0.5
126	Normal	0.5
698	Normal	0.5
857	Tumor	0.5
958	Normal	0.5
574	Normal	0.5
746	Normal	0.5
956	Normal	0.5
434	Normal	0.5
786	Normal	0.5
268	Normal	0.5
422	Normal	0.5
448	Normal	0.5
516	Normal	0.5
423	Tumor	0.5
816	Normal	0.5
515	Tumor	0.5
966	Normal	0.4
186	Normal	0.4
916	Normal	0.4
272	Normal	0.4
445	Tumor	0.4
284	Normal	0.4
262	Normal	0.4
818	Normal	0.4
146	Normal	0.4
258	Normal	0.4
924	Normal	0.4
142	Normal	0.4
451	Tumor	0.4
328	Normal	0.4
123	Tumor	0.4
723	Tumor	0.4
738	Normal	0.3
943	Tumor	0.3
873	Tumor	0.3
214	Normal	0.3
976	Normal	0.3
526	Normal	0.3
912	Normal	0.3
852	Normal	0.3
488	Normal	0.3
874	Normal	0.3
882	Normal	0.3
922	Normal	0.3
518	Normal	0.3
615	Tumor	0.3
384	Normal	0.3
635	Tumor	0.3
861	Tumor	0.3
858	Normal	0.3
286	Normal	0.3
228	Normal	0.3
481	Tumor	0.3
195	Tumor	0.3
968	Normal	0.3
222	Normal	0.3
412	Normal	0.3
232	Normal	0.3
884	Normal	0.3
494	Normal	0.3
368	Normal	0.3
482	Normal	0.3
558	Normal	0.3
778	Normal	0.3
421	Tumor	0.2
546	Normal	0.2
212	Normal	0.2
112	Tumor	0.2
192	Normal	0.2
756	Normal	0.2
364	Normal	0.2
1043	Tumor	0.2
435	Tumor	0.2
1027	Tumor	0.2
696	Normal	0.2
188	Normal	0.2
413	Tumor	0.2
534	Normal	0.2
741	Tumor	0.2
618	Normal	0.2
528	Normal	0.1
557	Tumor	0.1
341	Tumor	0.1
386	Normal	0.1
1016	Normal	0.1
918	Normal	0.1
218	Normal	0.1
728	Normal	0.1
715	Tumor	0.1
231	Tumor	0.1
1045	Tumor	0.1
224	Normal	0.1
567	Tumor	0.1
267	Tumor	0.1
436	Normal	0.1
1026	Normal	0.1
641	Tumor	0.1
647	Tumor	0.1
686	Normal	0.1
162	Normal	0.1
443	Tumor	0.0
474	Normal	0.0
524	Normal	0.0
1014	Normal	0.0
745	Tumor	0.0
394	Normal	0.0
984	Normal	0.0
665	Tumor	0.0
571	Tumor	0.0
663	Tumor	0.0
982	Normal	0.0
113	Tumor	0.0
213	Tumor	0.0
823	Tumor	0.0
716	Normal	0.0
472	Normal	0.0
785	Tumor	0.0
357	Tumor	0.0
868	Normal	-0.1
427	Tumor	-0.1
714	Normal	-0.1
755	Tumor	-0.1
1042	Normal	-0.1
513	Tumor	-0.1
361	Tumor	-0.1
137	Tumor	-0.1
953	Tumor	-0.1
395	Tumor	-0.1
981	Tumor	-0.1
978	Normal	-0.1
461	Tumor	-0.1
813	Tumor	-0.1
297	Tumor	-0.1
365	Tumor	-0.1
191	Tumor	-0.1
977	Tumor	-0.1
722	Normal	-0.1
411	Tumor	-0.1
727	Tumor	-0.1
484	Normal	-0.1
353	Tumor	-0.1
217	Tumor	-0.1
975	Tumor	-0.2
145	Tumor	-0.2
431	Tumor	-0.2
883	Tumor	-0.2
447	Tumor	-0.2
185	Tumor	-0.2
1015	Tumor	-0.2
963	Tumor	-0.2
863	Tumor	-0.2
671	Tumor	-0.2
538	Normal	-0.2
1021	Tumor	-0.2
527	Tumor	-0.2
498	Normal	-0.2
493	Tumor	-0.2
492	Normal	-0.3
815	Tumor	-0.3
685	Tumor	-0.3
257	Tumor	-0.3
697	Tumor	-0.3
271	Tumor	-0.3
478	Normal	-0.3
814	Normal	-0.3
147	Tumor	-0.3
135	Tumor	-0.3
471	Tumor	-0.3
921	Tumor	-0.3
1025	Tumor	-0.3
463	Tumor	-0.3
573	Tumor	-0.3
467	Tumor	-0.3
187	Tumor	-0.4
926	Normal	-0.4
367	Tumor	-0.4
913	Tumor	-0.4
383	Tumor	-0.4
125	Tumor	-0.4
877	Tumor	-0.4
661	Tumor	-0.4
536	Normal	-0.4
1032	Normal	-0.4
881	Tumor	-0.5
923	Tumor	-0.5
141	Tumor	-0.5
221	Tumor	-0.5
327	Tumor	-0.5
917	Tumor	-0.5
355	Tumor	-0.5
737	Tumor	-0.5
965	Tumor	-0.5
363	Tumor	-0.6
416	Normal	-0.6
331	Tumor	-0.6
937	Tumor	-0.6
617	Tumor	-0.6
387	Tumor	-0.6
851	Tumor	-0.6
391	Tumor	-0.6
967	Tumor	-0.6
313	Tumor	-0.6
713	Tumor	-0.6
491	Tumor	-0.6
351	Tumor	-0.7
951	Tumor	-0.7
343	Tumor	-0.7
721	Tumor	-0.7
277	Tumor	-0.7
311	Tumor	-0.7
375	Tumor	-0.7
161	Tumor	-0.7
554	Normal	-0.8
477	Tumor	-0.8
817	Tumor	-0.8
497	Tumor	-0.8
415	Tumor	-0.8
777	Tumor	-0.8
385	Tumor	-0.8
425	Tumor	-0.9
517	Tumor	-0.9
455	Tumor	-0.9
525	Tumor	-0.9
983	Tumor	-0.9
724	Normal	-0.9
393	Tumor	-0.9
487	Tumor	-0.9
743	Tumor	-1.0
1013	Tumor	-1.0
925	Tumor	-1.0
553	Tumor	-1.0
483	Tumor	-1.1
695	Tumor	-1.1
533	Tumor	-1.1
957	Tumor	-1.1
223	Tumor	-1.2
1031	Tumor	-1.2
545	Tumor	-1.2
537	Tumor	-1.3
535	Tumor	-1.3
131	Tumor	-1.4
283	Tumor	-1.5
865	Tumor	-1.5
227	Tumor	-1.5
285	Tumor	-1.6
523	Tumor	-1.6
473	Tumor	-1.7
211	Tumor	-1.8
Show allShow less

LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA017378
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS