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VPS37B
HPA
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  • VPS37B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

VPS37B
Synonyms FLJ12750
Gene descriptioni

Full gene name according to HGNC.

VPS37B subunit of ESCRT-I
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q24.31
Chromosome location (bp) 122865330 - 122896127
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000139722 (version 109)
Entrez gene 79720
HGNC HGNC:25754
UniProt Q9H9H4 (UniProt - Evidence at protein level)
neXtProt NX_Q9H9H4
GeneCards VPS37B
Antibodypedia VPS37B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies. May be involved in cell growth and differentiation.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables calcium-dependent protein binding activity. Involved in positive regulation of viral budding via host ESCRT complex. Located in endosome membrane; midbody; and plasma membrane. Part of ESCRT I complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
VPS37B-201
ENSP00000267202
ENST00000267202
Q9H9H4
[Direct mapping] Vacuolar protein sorting-associated protein 37B
Show all
A0A024RBU0
[Target identity:100%; Query identity:100%] Vacuolar protein sorting 37B (Yeast), isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000813 [ESCRT I complex]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0006612 [protein targeting to membrane]
GO:0006623 [protein targeting to vacuole]
GO:0006886 [intracellular protein transport]
GO:0007034 [vacuolar transport]
GO:0010008 [endosome membrane]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016236 [macroautophagy]
GO:0019076 [viral release from host cell]
GO:0030496 [midbody]
GO:0031902 [late endosome membrane]
GO:0036258 [multivesicular body assembly]
GO:0039702 [viral budding via host ESCRT complex]
GO:0043162 [ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway]
GO:0043328 [protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway]
GO:0048306 [calcium-dependent protein binding]
GO:0061024 [membrane organization]
GO:0070062 [extracellular exosome]
GO:0072666 [establishment of protein localization to vacuole]
GO:0090148 [membrane fission]
GO:1903774 [positive regulation of viral budding via host ESCRT complex]
Show all
285 aa
31.3 kDa
No 0
VPS37B-202
ENSP00000360294
ENST00000371248
F5H1F6
[Direct mapping] Vacuolar protein sorting-associated protein 37B
Show all
   THUMBUP predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000813 [ESCRT I complex]
GO:0005768 [endosome]
GO:0006886 [intracellular protein transport]
GO:0007034 [vacuolar transport]
GO:0010008 [endosome membrane]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0031902 [late endosome membrane]
GO:0036258 [multivesicular body assembly]
GO:0043162 [ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway]
GO:0061024 [membrane organization]
GO:0072666 [establishment of protein localization to vacuole]
Show all
184 aa
20.7 kDa
Yes 0
VPS37B-203
ENSP00000446075
ENST00000535765
F5H4M0
[Direct mapping] Vacuolar protein sorting-associated protein 37B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000813 [ESCRT I complex]
GO:0005768 [endosome]
GO:0006886 [intracellular protein transport]
GO:0007034 [vacuolar transport]
GO:0010008 [endosome membrane]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0031902 [late endosome membrane]
GO:0036258 [multivesicular body assembly]
GO:0043162 [ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway]
GO:0061024 [membrane organization]
GO:0072666 [establishment of protein localization to vacuole]
Show all
271 aa
29.7 kDa
No 0

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