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WDR20
HPA
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  • WDR20
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

WDR20
Synonyms Bun107, DMR, FLJ33659, MGC33177
Gene descriptioni

Full gene name according to HGNC.

WD repeat domain 20
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q32.31
Chromosome location (bp) 102139503 - 102224847
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000140153 (version 109)
Entrez gene 91833
HGNC HGNC:19667
UniProt Q8TBZ3 (UniProt - Evidence at protein level)
neXtProt NX_Q8TBZ3
GeneCards WDR20
Antibodypedia WDR20 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Regulator of deubiquitinating complexes. Activates deubiquitinating activity of complexes containing USP12 1, 2. Anchors at the base of the ubiquitin-contacting loop of USP12 and remotely modulates the catalytic center of the enzyme 3. Regulates shuttling of the USP12 deubiquitinase complex between the plasma membrane, cytoplasm and nucleus 4.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a WD repeat-containing protein that functions to preserve and regulate the activity of the USP12-UAF1 deubiquitinating enzyme complex. Multiple alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jun 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
WDR20-201
ENSP00000299135
ENST00000299135
Q8TBZ3
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
86 aa
9.8 kDa
No 0
WDR20-202
ENSP00000314209
ENST00000322340
Q8TBZ3
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
195 aa
22.2 kDa
No 0
WDR20-203
ENSP00000335434
ENST00000335263
Q8TBZ3
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
581 aa
63.8 kDa
No 0
WDR20-204
ENSP00000341037
ENST00000342702
Q8TBZ3
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
569 aa
62.9 kDa
No 0
WDR20-205
ENSP00000395793
ENST00000424963
A0A088AWN2
[Direct mapping] WD repeat-containing protein 20
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
612 aa
67.5 kDa
No 0
WDR20-206
ENSP00000406084
ENST00000454394
Q8TBZ3
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
600 aa
66.5 kDa
No 0
WDR20-210
ENSP00000451633
ENST00000556511
Q8TBZ3
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
508 aa
56.2 kDa
No 0
WDR20-211
ENSP00000450636
ENST00000556807
Q8TBZ3
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
520 aa
57.2 kDa
No 0
WDR20-216
ENSP00000452774
ENST00000558567
H0YKE8
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
176 aa
20 kDa
No 0
WDR20-217
ENSP00000454151
ENST00000558854
H0YNU0
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
66 aa
7.3 kDa
No 0
WDR20-218
ENSP00000452638
ENST00000559478
H0YK31
[Direct mapping] WD repeat-containing protein 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
72 aa
7.9 kDa
No 0

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