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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:69.1 nTPM
HPA Brain:91.2 nTPM
GTEx:69.1 nTPM
FANTOM5:204.8 Scaled Tags Per Million
Pig:51.6 nTPM
Mouse:34.9 nTPM
Allen mouse:1.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041790Antibody CAB004646
Glial cells LowLow
Neuronal cells MediumLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 72.8
1781 Male, age 74, unknown 92.6
2481 Female, age 94, left hemisphere 86.8
2846 Female, age 79, unknown 84.4
2290 Female, age 72, unknown 73.9
1857 Female, age 85, left hemisphere 71.8
1854 Male, age 80, left hemisphere 63.1
2288 Male, age 75, left hemisphere 56.0
2289 Male, age 61, right hemisphere 54.1
Globus pallidus, externus
nTPM: 52.9
2395 Male, age 75, both hemispheres 66.3
2772 Female, age 79, unknown 61.6
2646 Male, age 61, right hemisphere 59.2
2567 Female, age 72, unknown 42.7
1996 Male, age 80, right hemisphere 34.9
Globus pallidus, internus
nTPM: 50.3
2483 Female, age 94, right hemisphere 78.5
2287 Male, age 75, right hemisphere 73.0
1818 Male, age 74, unknown 52.3
2566 Female, age 72, unknown 49.0
2778 Female, age 91, both hemispheres 35.8
2037 Male, age 80, right hemisphere 33.7
2111 Female, age 85, right hemisphere 29.7
Nucleus accumbens
nTPM: 78.5
1856 Female, age 91, right hemisphere 102.3
1783 Male, age 74, unknown 96.8
2391 Female, age 94, left hemisphere 95.6
2698 Female, age 72, unknown 92.5
1806 Female, age 85, left hemisphere 73.5
2824 Male, age 61, right hemisphere 61.2
2286 Male, age 75, left hemisphere 53.8
2732 Male, age 80, right hemisphere 52.6
Nucleus basalis of Meynert
nTPM: 63.7
2484 Female, age 94, left hemisphere 74.3
2821 Male, age 75, both hemispheres 64.8
2393 Male, age 80, right hemisphere 61.7
2569 Male, age 61, both hemispheres 53.7
Nucleus of the diagonal band
nTPM: 91.2
1812 Female, age 91, both hemispheres 124.6
2775 Male, age 80, right hemisphere 114.9
2195 Female, age 85, both hemispheres 100.2
1979 Male, age 74, unknown 66.7
2029 Male, age 61, right hemisphere 49.7
Putamen
nTPM: 69.1
2466 Female, age 79, unknown 79.4
1838 Male, age 80, right hemisphere 78.8
1829 Male, age 74, unknown 73.2
2482 Female, age 94, left hemisphere 72.7
1937 Female, age 91, right hemisphere 70.0
2647 Male, age 75, left hemisphere 57.7
2489 Female, age 72, unknown 51.7
Septal nuclei
nTPM: 78.9
1960 Male, age 74, unknown 116.3
2031 Female, age 72, unknown 105.3
2009 Female, age 91, both hemispheres 97.5
2629 Female, age 94, right hemisphere 65.3
2059 Female, age 85, both hemispheres 61.5
2199 Male, age 80, right hemisphere 59.1
2394 Male, age 61, left hemisphere 47.4
Stria terminalis, bed nucleus
nTPM: 76.8
1974 Female, age 91, both hemispheres 97.7
2201 Male, age 74, unknown 75.2
2486 Female, age 94, both hemispheres 57.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 54.3
Samples: 246

Max nTPM: 592.2
Min nTPM: 14.5
Std nTPM: 48.9
Median nTPM: 44.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 592.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 262.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 260.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 225.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 214.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 213.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 179.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 176.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 117.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 110.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 95.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 94.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 94.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 91.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 89.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 88.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 87.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 85.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 83.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 83.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 82.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 81.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 81.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 81.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 80.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 77.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 76.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 75.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 75.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 75.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 75.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 74.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 73.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 73.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 71.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 71.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 71.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 70.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 70.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 68.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 68.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 68.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 67.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 67.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 67.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 66.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 66.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 65.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 65.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 64.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 63.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 63.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 63.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 63.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 63.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 62.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 62.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 61.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 61.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 61.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 60.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 59.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 59.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 59.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 59.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 58.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 58.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 57.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 57.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 57.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 57.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 56.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 56.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 55.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 55.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 55.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 55.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 54.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 54.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 54.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 54.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 53.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 53.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 51.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 51.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 51.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 50.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 50.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 50.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 50.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 49.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 49.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 48.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 48.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 47.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 47.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 47.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 47.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 47.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 47.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 47.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 46.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 46.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 45.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 45.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 44.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 44.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 44.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 43.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 43.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 43.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 42.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 42.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 41.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 40.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 40.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 40.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 40.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 39.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 39.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 39.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 39.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 39.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 38.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 37.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 37.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 37.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 37.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 37.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 37.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 36.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 36.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 36.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 36.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 36.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 35.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 35.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 35.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 35.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 35.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 33.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 33.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 33.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 33.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 33.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 32.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 32.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 32.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 32.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 32.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 32.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 31.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 31.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 31.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 31.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 31.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 31.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 31.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 30.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 30.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 30.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 30.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 29.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 29.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 29.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 29.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 28.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 28.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 28.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 28.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 27.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 27.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 27.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 27.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 27.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 27.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 27.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 27.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 26.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 26.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 25.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 25.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 25.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 25.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 25.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 25.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 25.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 25.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 25.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 24.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 24.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 24.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 24.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 24.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 24.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 23.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 23.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 23.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 22.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 21.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 21.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 21.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 20.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 20.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 20.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 19.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 19.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 19.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 14.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 69.1
Samples: 246

Max nTPM: 769.1
Min nTPM: 12.7
Std nTPM: 57.3
Median nTPM: 62.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 769.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 318.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 245.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 230.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 195.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 152.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 143.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 141.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 138.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 133.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 130.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 126.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 124.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 122.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 113.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 106.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 105.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 104.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 104.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 104.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 101.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 100.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 98.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 98.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 97.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 95.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 95.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 95.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 95.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 95.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 94.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 94.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 94.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 94.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 94.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 93.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 93.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 93.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 93.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 91.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 91.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 89.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 89.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 88.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 87.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 87.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 87.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 86.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 86.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 86.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 86.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 85.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 84.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 84.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 83.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 83.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 82.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 82.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 82.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 81.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 81.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 80.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 80.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 80.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 80.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 80.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 79.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 79.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 79.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 79.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 79.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 78.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 77.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 77.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 76.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 76.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 76.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 76.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 76.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 76.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 75.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 75.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 74.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 74.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 74.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 74.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 73.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 73.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 73.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 73.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 73.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 73.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 72.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 72.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 72.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 71.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 71.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 70.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 69.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 69.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 69.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 68.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 68.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 68.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 68.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 68.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 67.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 67.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 67.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 66.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 66.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 66.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 65.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 65.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 65.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 65.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 64.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 63.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 63.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 62.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 62.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 62.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 62.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 62.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 61.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 61.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 61.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 61.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 61.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 61.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 61.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 60.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 60.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 60.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 60.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 60.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 59.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 59.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 59.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 58.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 58.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 58.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 57.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 57.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 57.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 57.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 57.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 57.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 56.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 55.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 54.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 53.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 53.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 53.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 53.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 53.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 53.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 52.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 52.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 52.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 51.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 51.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 50.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 50.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 50.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 50.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 50.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 50.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 49.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 49.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 49.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 49.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 48.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 48.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 47.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 46.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 46.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 46.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 46.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 46.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 45.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 44.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 44.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 44.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 43.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 42.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 41.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 40.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 39.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 39.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 38.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 38.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 38.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 37.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 36.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 36.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 36.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 35.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 35.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 34.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 34.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 33.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 33.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 32.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 32.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 31.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 31.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 30.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 30.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 29.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 29.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 28.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 28.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 28.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 28.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 27.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 27.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 26.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 26.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 25.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 25.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 24.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 24.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 24.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 23.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 22.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 22.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 21.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 21.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 20.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 20.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 20.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 19.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 19.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 17.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 17.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 16.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 12.7
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Brain - Putamen (basal ganglia)
Average nTPM: 52.4
Samples: 205

Max nTPM: 523.9
Min nTPM: 14.6
Std nTPM: 49.4
Median nTPM: 42.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 523.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 323.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 253.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 233.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 220.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 198.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 102.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 101.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 94.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 93.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 88.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 87.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 87.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 81.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 79.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 79.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 77.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 76.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 76.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 76.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 75.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 74.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 74.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 74.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 74.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 74.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 73.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 73.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 72.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 71.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 71.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 70.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 70.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 69.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 69.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 69.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 69.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 69.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 68.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 67.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 67.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 67.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 66.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 66.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 66.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 65.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 63.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 60.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 60.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 60.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 59.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 58.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 57.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 57.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 56.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 55.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 54.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 54.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 54.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 53.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 52.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 52.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 51.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 51.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 51.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 50.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 50.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 50.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 49.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 49.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 48.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 48.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 48.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 48.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 48.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 47.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 47.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 47.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 46.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 46.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 46.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 46.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 46.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 46.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 45.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 45.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 45.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 45.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 44.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 43.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 43.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 43.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 43.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 42.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 42.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 42.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 42.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 42.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 42.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 41.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 40.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 40.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 40.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 40.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 40.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 39.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 39.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 39.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 39.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 39.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 38.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 37.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 37.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 37.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 37.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 37.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 37.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 36.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 36.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 36.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 35.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 35.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 34.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 34.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 34.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 34.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 34.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 34.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 34.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 34.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 33.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 33.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 32.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 31.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 31.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 31.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 31.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 30.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 30.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 30.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 30.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 30.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 29.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 29.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 29.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 29.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 29.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 29.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 28.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 28.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 28.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 28.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 27.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 27.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 27.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 27.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 27.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 26.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 25.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 24.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 24.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 24.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 24.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 23.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 23.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 23.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 23.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 23.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 22.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 22.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 22.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 22.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 21.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 21.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 21.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 20.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 20.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 19.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 19.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 19.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 19.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 18.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 18.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 16.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

204.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 182.5
FF:10164-103B2 76 years, female 182.5
Nucleus accumbens
Scaled Tags Per Million: 125.0
FF:10037-101F1 23-56 years, mixed 125.0
Putamen
Scaled Tags Per Million: 204.8
FF:10176-103C5 60 years, female 204.8
Globus pallidus
Scaled Tags Per Million: 90.1
FF:10161-103A8 76 years, female 97.9
FF:10175-103C4 60 years, female 82.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.6
Pig sample Sample description nTPM
Caudate
nTPM: 50.5
Samples: 4

Max nTPM: 57.6
Min nTPM: 44.3
Sample A Female 48.5
Sample B Female 51.7
Sample C Male 57.6
Sample D Male 44.3
Putamen
nTPM: 48.8
Samples: 4

Max nTPM: 58.4
Min nTPM: 40.7
Sample A Female 40.7
Sample B Female 46.9
Sample C Male 58.4
Sample D Male 49.1
Septum
nTPM: 49.7
Samples: 4

Max nTPM: 62.1
Min nTPM: 39.1
Sample A Female 51.9
Sample B Female 45.7
Sample C Male 62.1
Sample D Male 39.1
Ventral pallidum
nTPM: 51.6
Samples: 4

Max nTPM: 66.6
Min nTPM: 43.9
Sample A Female 50.4
Sample B Female 45.6
Sample C Male 66.6
Sample D Male 43.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 34.9
Samples: 4

Max nTPM: 35.7
Min nTPM: 33.4
Sample A Male 35.2
Sample B Male 35.7
Sample C Female 35.4
Sample D Female 33.4
Septum
nTPM: 25.5
Samples: 4

Max nTPM: 27.4
Min nTPM: 24.3
Sample A Male 24.4
Sample B Male 24.3
Sample C Female 27.4
Sample D Female 25.9
Ventral forebrain
nTPM: 29.8
Samples: 4

Max nTPM: 30.8
Min nTPM: 29.0
Sample A Male 30.8
Sample B Male 29.1
Sample C Female 29.0
Sample D Female 30.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.0
67814214 Antisense, RP_040920_01_G02, Mouse strain C57BL/6J (56 days, male) 1.0
70744391 Antisense, RP_050725_02_B06, Mouse strain C57BL/6J (56 days, male) 1.0
Pallidum
Expression energy: 1.0
67814214 Antisense, RP_040920_01_G02, Mouse strain C57BL/6J (56 days, male) 1.5
70744391 Antisense, RP_050725_02_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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