HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:25.2 nTPM
HPA Brain:49.5 nTPM
GTEx:25.2 nTPM
FANTOM5:62.5 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:7.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042109
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
1911 Female, age 85, right hemisphere 56.6
1898 Male, age 80, left hemisphere 51.5
1855 Male, age 76, left hemisphere 41.3
2529 Female, age 94, left hemisphere 41.2
2621 Female, age 67, right hemisphere 32.7
2148 Female, age 91, left hemisphere 30.8
Dentate gyrus
nTPM: 44.7
2010 Male, age 76, both hemispheres 83.2
2530 Female, age 94, left hemisphere 56.3
2528 Male, age 74, both hemispheres 45.5
2531 Female, age 67, both hemispheres 28.7
1927 Female, age 91, both hemispheres 27.3
2246 Female, age 85, both hemispheres 27.1
Entorhinal gyrus
nTPM: 25.1
2117 Female, age 91, right hemisphere 40.3
1787 Male, age 76, left hemisphere 32.9
1938 Female, age 85, left hemisphere 25.1
2686 Male, age 75, right hemisphere 20.0
2764 Male, age 80, right hemisphere 18.3
2613 Female, age 94, left hemisphere 14.0
Hippocampus, CA1
nTPM: 39.4
1873 Female, age 85, both hemispheres 53.6
2082 Female, age 91, right hemisphere 44.4
2749 Male, age 80, left hemisphere 39.8
2045 Male, age 76, both hemispheres 31.6
2527 Male, age 74, both hemispheres 27.7
Hippocampus, CA2
nTPM: 49.5
2249 Male, age 74, both hemispheres 70.5
2437 Female, age 94, left hemisphere 58.7
1940 Female, age 85, left hemisphere 52.3
1892 Male, age 76, both hemispheres 44.0
2113 Female, age 91, right hemisphere 41.6
1963 Male, age 80, left hemisphere 30.1
Hippocampus, CA3
nTPM: 25.4
1867 Male, age 76, both hemispheres 39.5
1891 Female, age 85, both hemispheres 39.2
2137 Male, age 80, left hemisphere 22.9
2436 Male, age 74, both hemispheres 20.0
2620 Female, age 94, left hemisphere 17.4
2861 Female, age 67, both hemispheres 13.4
Parahippocampal cortex
nTPM: 25.0
2245 Female, age 91, both hemispheres 38.5
2018 Male, age 76, both hemispheres 38.2
2250 Female, age 67, right hemisphere 31.3
1990 Female, age 91, right hemisphere 27.8
1933 Female, age 85, both hemispheres 23.4
2532 Female, age 72, left hemisphere 22.9
2693 Female, age 94, both hemispheres 19.6
2692 Male, age 74, both hemispheres 19.5
1850 Male, age 80, both hemispheres 17.2
2622 Female, age 67, right hemisphere 11.8
Perirhinal gyrus
nTPM: 18.4
2848 Male, age 76, right hemisphere 21.5
2521 Female, age 94, right hemisphere 20.3
1841 Female, age 85, right hemisphere 17.6
1794 Male, age 80, right hemisphere 16.3
1847 Female, age 91, left hemisphere 16.2
Subiculum
nTPM: 40.4
2042 Male, age 76, both hemispheres 77.3
1901 Male, age 80, both hemispheres 47.5
2729 Female, age 91, right hemisphere 44.3
2438 Female, age 94, left hemisphere 25.0
2619 Male, age 74, both hemispheres 24.2
1977 Female, age 85, both hemispheres 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 25.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.2
Samples: 197

Max nTPM: 145.8
Min nTPM: 5.3
Std nTPM: 15.7
Median nTPM: 21.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 145.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 79.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 74.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 70.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 69.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 62.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 55.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 50.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 48.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 62.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.5
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 8.1
Pig sample Sample description nTPM
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 8.5
Min nTPM: 4.9
Sample A Female 5.0
Sample B Female 4.9
Sample C Male 5.7
Sample D Male 8.5
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.5
Sample A Female 8.2
Sample B Female 8.5
Sample C Male 9.2
Sample D Male 6.5
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.0
Min nTPM: 3.6
Sample A Female 6.0
Sample B Female 5.1
Sample C Male 5.3
Sample D Male 3.6
Ventral hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.1
Sample A Female 6.7
Sample B Female 5.1
Sample C Male 6.3
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.4
Sample A Male 3.8
Sample B Male 3.4
Sample C Female 4.8
Sample D Female 3.9
Hippocampal formation
nTPM: 7.3
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.4
Sample A Male 7.7
Sample B Male 6.9
Sample C Female 8.0
Sample D Female 6.4

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