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RLBP1
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  • RLBP1
TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expression
Retinai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ganglion cells : Not detected
Inner nuclear layer: Medium
Inner plexiform layer: Not detected
Limiting membrane: Not detected
Nerve fiber layer: Medium
Outer plexiform layer: Not detected
Photoreceptor cells: Low
Pigment epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:257.5 nTPM
GTEx:257.5 nTPM
FANTOM5:700.4 Scaled Tags Per Million
Pig:191.2 nTPM
Mouse:737.1 nTPM

RETINA - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA042051
Photoreceptor cells High
Limiting membrane Not detected
Outer plexiform layer Medium
Inner nuclear layer Medium
Inner plexiform layer Medium
Ganglion cells Medium
Nerve fiber layer Medium

RETINA - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA044083
Pigment epithelial cells Medium
Photoreceptor cells Low
Limiting membrane Not detected
Outer plexiform layer Not detected
Inner nuclear layer Medium
Inner plexiform layer Not detected
Ganglion cells Not detected
Nerve fiber layer High

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.5
GTEx sample id Sample description nTPM
Retina
Average nTPM: 257.5
Samples: 105

Max nTPM: 536.4
Min nTPM: 101.7
Std nTPM: 80.7
Median nTPM:
394_1 75 years, female 536.4
506_1 65 years, male 454.1
4_1 88 years, female 435.2
354_1 81 years, female 423.0
189_1 76 years, male 412.3
452_1 88 years, female 410.5
264_1 73 years, female 396.2
351_1 91 years, male 381.9
406_1 79 years, male 381.7
308_1 70 years, female 370.7
319_1 81 years, male 369.3
177_1 74 years, male 360.5
163_1 78 years, male 353.8
376_1 75 years, female 350.1
349_1 83 years, male 349.1
384_1 83 years, male 338.9
115_1 83 years, male 337.3
246_1 77 years, male 334.9
375_1 74 years, female 332.4
286_1 68 years, female 329.4
350_1 84 years, female 324.9
265_1 87 years, male 323.6
379_1 60 years, male 316.6
355_1 70 years, female 302.7
137_1 83 years, male 300.3
501_1 88 years, male 299.9
405_1 91 years, male 299.3
173_1 67 years, male 298.2
389_1 86 years, female 296.9
109_1 81 years, female 294.3
356_1 87 years, female 288.4
353_1 82 years, female 287.8
396_1 62 years, male 287.7
295_1 61 years, female 286.4
447_1 81 years, male 285.8
120_1 70 years, female 285.0
517_1 88 years, male 284.1
386_1 76 years, male 280.1
42_1 85 years, male 277.3
503_1 68 years, male 275.3
172_1 72 years, female 271.2
126_1 63 years, male 270.1
518_1 75 years, female 269.0
318_1 68 years, male 265.9
292_1 71 years, male 263.7
119_1 70 years, female 262.9
313_1 79 years, female 262.9
352_1 62 years, male 261.7
377_1 82 years, female 257.2
314_1 67 years, male 253.8
288_1 66 years, female 253.4
315_1 62 years, female 253.0
243_1 75 years, male 247.4
324_1 76 years, male 245.7
320_1 89 years, female 245.6
266_1 85 years, male 244.1
254_1 77 years, female 242.2
413_1 59 years, female 241.4
468_1 89 years, male 240.8
404_1 82 years, female 237.0
35_1 74 years, female 233.8
18_1 88 years, male 233.4
17_1 71 years, male 229.8
229_1 69 years, female 229.2
316_1 62 years, male 223.6
6_1 73 years, female 223.2
99_1 64 years, male 220.6
526_1 61 years, male 220.6
425_1 59 years, female 218.9
142_1 61 years, female 217.2
153_1 70 years, female 216.8
291_1 76 years, male 216.7
9_1 66 years, female 215.8
414_1 84 years, female 214.9
217_1 76 years, male 211.2
145_1 84 years, male 208.4
317_1 60 years, male 205.9
149_1 88 years, male 205.7
89_1 63 years, male 205.4
311_1 78 years, male 202.9
117_1 61 years, male 200.8
348_1 84 years, male 200.1
81_1 67 years, male 197.2
162_1 79 years, female 195.9
480_1 63 years, male 195.6
251_1 78 years, male 193.8
335_1 73 years, female 189.2
347_1 72 years, male 178.1
499_1 55 years, female 175.9
237_1 82 years, male 175.0
32_1 67 years, male 172.7
321_1 62 years, female 168.8
293_1 68 years, female 167.6
466_1 57 years, female 164.9
218_1 71 years, female 162.1
41_1 94 years, female 152.6
491_1 89 years, female 151.2
322_1 76 years, male 150.4
2_1 77 years, female 141.7
415_1 77 years, female 135.4
307_1 66 years, female 132.5
139_1 64 years, female 122.6
43_1 64 years, female 114.3
495_1 57 years, female 102.7
490_1 67 years, female 101.7
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

700.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 700.4
FF:10030-101E3 24-65 years, mixed 700.4

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.2
Pig sample Sample description nTPM
Retina
nTPM: 191.2
Samples: 4

Max nTPM: 229.1
Min nTPM: 149.5
Sample A Female 165.2
Sample B Female 229.1
Sample C Male 220.9
Sample D Male 149.5

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

737.1
Mouse sample Sample description nTPM
Retina
nTPM: 737.1
Samples: 4

Max nTPM: 828.4
Min nTPM: 659.8
Sample A Male 828.4
Sample B Male 705.0
Sample C Female 755.3
Sample D Female 659.8

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