HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:52.9 nTPM
HPA Brain:31.9 nTPM
GTEx:52.9 nTPM
FANTOM5:39.7 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:30.7 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
1898 Male, age 80, left hemisphere 35.4
2621 Female, age 67, right hemisphere 32.4
1911 Female, age 85, right hemisphere 32.0
2529 Female, age 94, left hemisphere 32.0
1855 Male, age 76, left hemisphere 30.4
2148 Female, age 91, left hemisphere 29.3
Dentate gyrus
nTPM: 28.3
2010 Male, age 76, both hemispheres 35.5
2530 Female, age 94, left hemisphere 31.8
2528 Male, age 74, both hemispheres 29.0
1927 Female, age 91, both hemispheres 26.3
2246 Female, age 85, both hemispheres 24.6
2531 Female, age 67, both hemispheres 22.6
Entorhinal gyrus
nTPM: 26.4
2117 Female, age 91, right hemisphere 34.4
2686 Male, age 75, right hemisphere 29.4
1787 Male, age 76, left hemisphere 27.5
1938 Female, age 85, left hemisphere 24.6
2764 Male, age 80, right hemisphere 23.2
2613 Female, age 94, left hemisphere 19.3
Hippocampus, CA1
nTPM: 29.9
2045 Male, age 76, both hemispheres 33.9
2527 Male, age 74, both hemispheres 30.2
1873 Female, age 85, both hemispheres 29.4
2082 Female, age 91, right hemisphere 28.7
2749 Male, age 80, left hemisphere 27.0
Hippocampus, CA2
nTPM: 31.3
1940 Female, age 85, left hemisphere 34.6
2113 Female, age 91, right hemisphere 32.6
1963 Male, age 80, left hemisphere 32.4
2249 Male, age 74, both hemispheres 31.6
2437 Female, age 94, left hemisphere 28.7
1892 Male, age 76, both hemispheres 27.9
Hippocampus, CA3
nTPM: 28.0
2436 Male, age 74, both hemispheres 33.0
1867 Male, age 76, both hemispheres 32.1
1891 Female, age 85, both hemispheres 31.5
2137 Male, age 80, left hemisphere 25.6
2861 Female, age 67, both hemispheres 24.5
2620 Female, age 94, left hemisphere 21.1
Parahippocampal cortex
nTPM: 25.9
2018 Male, age 76, both hemispheres 39.3
2692 Male, age 74, both hemispheres 27.6
1933 Female, age 85, both hemispheres 27.3
2245 Female, age 91, both hemispheres 26.0
2250 Female, age 67, right hemisphere 25.8
1990 Female, age 91, right hemisphere 25.0
1850 Male, age 80, both hemispheres 23.7
2693 Female, age 94, both hemispheres 23.2
2622 Female, age 67, right hemisphere 20.8
2532 Female, age 72, left hemisphere 20.7
Perirhinal gyrus
nTPM: 24.1
2521 Female, age 94, right hemisphere 27.8
1841 Female, age 85, right hemisphere 25.0
1847 Female, age 91, left hemisphere 23.6
2848 Male, age 76, right hemisphere 22.5
1794 Male, age 80, right hemisphere 21.4
Subiculum
nTPM: 30.2
2042 Male, age 76, both hemispheres 40.5
1901 Male, age 80, both hemispheres 33.3
2729 Female, age 91, right hemisphere 32.8
1977 Female, age 85, both hemispheres 27.5
2438 Female, age 94, left hemisphere 23.6
2619 Male, age 74, both hemispheres 23.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 52.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.9
Samples: 197

Max nTPM: 115.9
Min nTPM: 22.7
Std nTPM: 15.1
Median nTPM: 51.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 115.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 101.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 92.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 92.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 90.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 84.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 81.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 80.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 80.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 78.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 78.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.7
FF:10153-102I9 76 years, female 46.3
FF:10169-103B7 60 years, female 33.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.0
Pig sample Sample description nTPM
Subiculum
nTPM: 18.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 17.2
Sample A Female 19.2
Sample B Female 17.2
Sample C Male 18.3
Sample D Male 18.3
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 20.6
Min nTPM: 17.3
Sample A Female 20.6
Sample B Female 19.9
Sample C Male 17.3
Sample D Male 17.8
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 18.7
Min nTPM: 16.7
Sample A Female 17.5
Sample B Female 18.7
Sample C Male 16.7
Sample D Male 18.7
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 19.5
Min nTPM: 18.6
Sample A Female 19.0
Sample B Female 19.5
Sample C Male 18.6
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 30.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.9
Samples: 4

Max nTPM: 30.3
Min nTPM: 23.5
Sample A Male 23.5
Sample B Male 25.9
Sample C Female 30.3
Sample D Female 27.8
Hippocampal formation
nTPM: 30.7
Samples: 4

Max nTPM: 35.0
Min nTPM: 27.5
Sample A Male 27.5
Sample B Male 28.4
Sample C Female 32.0
Sample D Female 35.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
69885678 Antisense, RP_050512_03_B11, Mouse strain C57BL/6J (56 days, male) 1.2

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