We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPS2
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1753.8 nTPM
GTEx:1753.8 nTPM
FANTOM5:52.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055133
Squamous epithelial cells Not detected


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1753.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1753.8
Samples: 156

Max nTPM: 4153.6
Min nTPM: 896.9
Std nTPM: 516.7
Median nTPM: 1678.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 4153.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 3470.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3072.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2860.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2818.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2747.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2707.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2706.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2679.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2665.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2655.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2641.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2603.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 2505.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2481.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 2479.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2449.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2330.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2307.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2307.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2298.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 2269.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2265.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2250.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2237.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 2217.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2154.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2151.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2146.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2135.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2101.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2087.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2085.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 2080.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2059.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2052.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2048.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2043.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2026.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2007.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1997.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1996.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1993.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1968.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1963.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1951.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1936.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1926.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1924.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1911.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 1907.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1882.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1876.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1873.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1870.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1839.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1837.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1834.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1827.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1822.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1812.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1807.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1805.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1804.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1796.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1778.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1774.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1751.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1738.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1738.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1727.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1720.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1717.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1702.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1698.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1698.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1693.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1692.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1663.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1659.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1648.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1646.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1637.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1635.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1630.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1619.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1613.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1607.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1600.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1598.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1593.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1592.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1591.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1585.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1581.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1571.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1562.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1561.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1553.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1552.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1552.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1538.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1532.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1528.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1525.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1514.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1499.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1490.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1485.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1479.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 1474.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1461.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1453.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1449.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1425.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1409.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1402.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1392.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1389.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1380.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1357.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1349.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1331.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1319.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1317.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1315.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1315.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1308.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1292.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1287.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1273.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1255.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1254.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1248.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1236.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1207.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1193.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1188.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1185.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1149.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1144.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1135.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1122.8
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1120.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1114.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1112.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1105.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1032.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1026.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1022.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 980.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 972.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 939.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 929.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 901.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 896.9
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

52.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 52.6
FF:10204-103F6 68 years, female 52.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org