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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
98.7
nTPM
GTEx:
98.7
nTPM
FANTOM5:
169.3
Scaled Tags Per Million
Mouse:
84.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
98.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 98.7
Samples: 105
Max nTPM: 189.7
Min nTPM: 43.9
Std nTPM: 29.9
Median nTPM:
162_1
79 years, female
189.7
4_1
88 years, female
163.1
218_1
71 years, female
158.3
137_1
83 years, male
151.7
109_1
81 years, female
151.3
452_1
88 years, female
150.3
41_1
94 years, female
148.0
491_1
89 years, female
147.4
145_1
84 years, male
146.6
389_1
86 years, female
145.0
173_1
67 years, male
143.7
295_1
61 years, female
139.8
117_1
61 years, male
139.6
490_1
67 years, female
138.7
354_1
81 years, female
136.3
17_1
71 years, male
134.5
350_1
84 years, female
133.6
394_1
75 years, female
131.6
99_1
64 years, male
129.7
43_1
64 years, female
126.9
351_1
91 years, male
126.4
139_1
64 years, female
124.6
314_1
67 years, male
124.2
349_1
83 years, male
122.6
353_1
82 years, female
121.6
384_1
83 years, male
119.0
291_1
76 years, male
116.9
6_1
73 years, female
115.9
335_1
73 years, female
115.2
315_1
62 years, female
114.9
120_1
70 years, female
113.9
379_1
60 years, male
113.4
386_1
76 years, male
112.4
254_1
77 years, female
111.9
307_1
66 years, female
110.1
415_1
77 years, female
110.0
288_1
66 years, female
109.6
501_1
88 years, male
108.5
18_1
88 years, male
108.2
518_1
75 years, female
107.2
317_1
60 years, male
106.0
42_1
85 years, male
105.6
189_1
76 years, male
105.1
119_1
70 years, female
104.8
526_1
61 years, male
104.4
375_1
74 years, female
104.1
32_1
67 years, male
103.3
466_1
57 years, female
102.8
35_1
74 years, female
101.2
243_1
75 years, male
101.0
324_1
76 years, male
98.0
320_1
89 years, female
97.0
376_1
75 years, female
96.2
319_1
81 years, male
95.6
9_1
66 years, female
94.2
322_1
76 years, male
93.9
265_1
87 years, male
93.0
347_1
72 years, male
92.9
149_1
88 years, male
91.0
142_1
61 years, female
90.1
237_1
82 years, male
88.7
414_1
84 years, female
88.4
318_1
68 years, male
87.7
313_1
79 years, female
85.8
447_1
81 years, male
84.9
89_1
63 years, male
84.4
264_1
73 years, female
79.8
308_1
70 years, female
79.4
251_1
78 years, male
79.3
115_1
83 years, male
79.0
311_1
78 years, male
76.3
405_1
91 years, male
76.3
355_1
70 years, female
76.2
396_1
62 years, male
76.0
352_1
62 years, male
75.9
229_1
69 years, female
75.5
377_1
82 years, female
74.6
413_1
59 years, female
74.2
348_1
84 years, male
73.2
503_1
68 years, male
72.6
517_1
88 years, male
71.4
425_1
59 years, female
70.9
506_1
65 years, male
70.6
404_1
82 years, female
69.4
126_1
63 years, male
67.8
246_1
77 years, male
67.6
286_1
68 years, female
67.6
316_1
62 years, male
66.9
495_1
57 years, female
66.7
266_1
85 years, male
66.4
480_1
63 years, male
66.3
356_1
87 years, female
66.0
81_1
67 years, male
65.3
293_1
68 years, female
65.2
172_1
72 years, female
64.3
406_1
79 years, male
63.7
177_1
74 years, male
62.1
468_1
89 years, male
61.6
2_1
77 years, female
60.9
499_1
55 years, female
57.9
292_1
71 years, male
57.6
217_1
76 years, male
55.0
153_1
70 years, female
54.4
321_1
62 years, female
52.2
163_1
78 years, male
43.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
