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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:28.9 nTPM
HPA Brain:67.9 nTPM
GTEx:28.9 nTPM
Mouse:27.3 nTPM
Allen mouse:10.8 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 33.2
2226 Male, age 75, left hemisphere 35.5
1961 Female, age 42, unknown 30.8
Dorsomedial nucleus
nTPM: 51.6
2041 Female, age 72, unknown 73.1
1989 Male, age 62, unknown 46.8
2017 Female, age 42, unknown 35.1
Lateral hypothalamic area
nTPM: 36.9
1791 Male, age 80, right hemisphere 38.9
2271 Male, age 75, both hemispheres 37.8
2412 Male, age 62, unknown 35.9
2228 Male, age 66, unknown 35.2
Mammillary body
nTPM: 50.8
1923 Female, age 72, unknown 59.9
1834 Female, age 42, unknown 57.6
1945 Male, age 80, right hemisphere 47.8
1948 Female, age 72, unknown 47.5
2413 Male, age 66, unknown 41.3
Paraventricular nucleus
nTPM: 44.2
2700 Male, age 62, unknown 44.2
Preoptic area
nTPM: 38.3
2414 Female, age 72, unknown 39.7
1861 Female, age 42, unknown 38.5
1907 Male, age 80, right hemisphere 36.6
Supraoptic nucleus
nTPM: 67.9
1894 Female, age 72, unknown 85.4
2043 Male, age 62, unknown 59.8
2835 Female, age 72, unknown 58.5
Ventromedial nucleus
nTPM: 49.5
1822 Female, age 42, unknown 54.7
1982 Female, age 72, unknown 44.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 28.9
Samples: 202

Max nTPM: 271.5
Min nTPM: 8.6
Std nTPM: 28.3
Median nTPM: 20.1
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 271.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 174.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 142.8
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 130.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 117.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 93.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 92.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 88.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 77.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 76.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 72.4
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 70.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 68.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 68.3
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 59.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 59.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 58.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 57.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 56.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 49.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 46.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 46.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 46.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 45.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 43.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 42.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 42.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 42.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 41.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 40.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 39.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 39.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 39.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 38.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 35.9
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 35.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 35.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 34.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 34.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 32.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 32.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 31.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.4
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 31.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 31.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 30.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 30.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 29.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 29.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 28.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 28.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 28.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 27.8
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 27.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 27.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 27.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 27.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.1
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 26.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 26.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 26.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 26.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 26.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 25.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 25.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 25.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 25.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 25.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 24.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 24.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 24.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 24.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 24.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 23.9
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 23.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 23.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 23.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 23.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 22.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 22.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 22.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 22.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 22.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 22.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 22.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 22.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 21.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 21.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 21.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 21.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 21.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 20.8
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 20.7
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 20.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 20.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 20.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 20.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 20.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 20.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 19.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 19.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 19.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 19.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 19.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 19.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 19.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 19.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 19.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 18.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 18.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 18.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 18.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 18.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 18.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 18.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 18.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 18.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 18.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 18.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 17.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 17.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 17.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 17.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 17.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 17.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 16.9
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 16.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 16.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 16.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 16.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 16.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 16.3
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 16.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 16.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 16.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 16.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 16.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 15.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 15.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 15.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 15.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 15.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 15.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 15.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 15.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 15.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 15.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 15.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 15.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 15.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 15.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 15.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 15.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 15.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 15.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 15.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 15.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 15.1
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 15.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 14.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 14.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 14.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 14.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 14.6
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 14.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 14.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 14.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 14.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 14.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 14.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 14.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 14.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 13.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 13.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 13.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 13.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 13.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 13.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 13.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 12.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 12.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 12.3
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 12.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 12.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 11.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 11.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 11.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 10.4
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 10.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 10.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 9.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 9.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 8.6
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 27.2
Samples: 4

Max nTPM: 29.0
Min nTPM: 24.9
Sample A Male 28.4
Sample B Male 29.0
Sample C Female 24.9
Sample D Female 26.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.8
69817019 Antisense, RP_050510_02_D10, Mouse strain C57BL/6J (56 days, male) 10.8

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