HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:66.8 nTPM
HPA Brain:37.7 nTPM
GTEx:66.8 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:62.3 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.7
Sample id Sample description nTPM
Hippocampus
nTPM: 37.7
1855 Male, age 76, left hemisphere 44.5
2529 Female, age 94, left hemisphere 41.3
1898 Male, age 80, left hemisphere 40.1
2621 Female, age 67, right hemisphere 36.0
2148 Female, age 91, left hemisphere 34.5
1911 Female, age 85, right hemisphere 29.8
Dentate gyrus
nTPM: 34.4
2530 Female, age 94, left hemisphere 45.5
2010 Male, age 76, both hemispheres 39.7
2528 Male, age 74, both hemispheres 34.9
2246 Female, age 85, both hemispheres 34.0
1927 Female, age 91, both hemispheres 27.0
2531 Female, age 67, both hemispheres 25.5
Entorhinal gyrus
nTPM: 30.9
2117 Female, age 91, right hemisphere 41.9
1938 Female, age 85, left hemisphere 31.0
1787 Male, age 76, left hemisphere 30.9
2613 Female, age 94, left hemisphere 30.9
2764 Male, age 80, right hemisphere 30.6
2686 Male, age 75, right hemisphere 20.3
Hippocampus, CA1
nTPM: 32.7
2527 Male, age 74, both hemispheres 37.2
2749 Male, age 80, left hemisphere 35.1
1873 Female, age 85, both hemispheres 34.0
2082 Female, age 91, right hemisphere 30.1
2045 Male, age 76, both hemispheres 26.9
Hippocampus, CA2
nTPM: 35.8
2249 Male, age 74, both hemispheres 41.6
2437 Female, age 94, left hemisphere 40.1
1963 Male, age 80, left hemisphere 36.7
1892 Male, age 76, both hemispheres 36.6
1940 Female, age 85, left hemisphere 30.5
2113 Female, age 91, right hemisphere 29.1
Hippocampus, CA3
nTPM: 32.8
2436 Male, age 74, both hemispheres 51.6
1867 Male, age 76, both hemispheres 33.3
2620 Female, age 94, left hemisphere 30.4
1891 Female, age 85, both hemispheres 28.3
2861 Female, age 67, both hemispheres 28.1
2137 Male, age 80, left hemisphere 25.2
Parahippocampal cortex
nTPM: 29.1
2250 Female, age 67, right hemisphere 32.6
2245 Female, age 91, both hemispheres 32.5
2692 Male, age 74, both hemispheres 31.2
1933 Female, age 85, both hemispheres 30.4
2622 Female, age 67, right hemisphere 29.0
2532 Female, age 72, left hemisphere 28.8
1850 Male, age 80, both hemispheres 27.6
2018 Male, age 76, both hemispheres 27.2
1990 Female, age 91, right hemisphere 26.6
2693 Female, age 94, both hemispheres 25.2
Perirhinal gyrus
nTPM: 27.4
1794 Male, age 80, right hemisphere 30.4
1847 Female, age 91, left hemisphere 29.0
2521 Female, age 94, right hemisphere 27.6
1841 Female, age 85, right hemisphere 26.2
2848 Male, age 76, right hemisphere 23.8
Subiculum
nTPM: 31.9
2619 Male, age 74, both hemispheres 40.0
2729 Female, age 91, right hemisphere 33.1
1977 Female, age 85, both hemispheres 30.5
2438 Female, age 94, left hemisphere 30.5
1901 Male, age 80, both hemispheres 30.4
2042 Male, age 76, both hemispheres 26.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 66.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.8
Samples: 197

Max nTPM: 107.5
Min nTPM: 27.6
Std nTPM: 16.4
Median nTPM: 65.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 107.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 106.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 103.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 100.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 99.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 98.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 98.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 96.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 95.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 93.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 92.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10153-102I9 76 years, female 48.2
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.1
Pig sample Sample description nTPM
Subiculum
nTPM: 24.0
Samples: 4

Max nTPM: 27.3
Min nTPM: 20.7
Sample A Female 27.3
Sample B Female 20.7
Sample C Male 25.5
Sample D Male 22.4
Dorsal hippocampus
nTPM: 29.3
Samples: 4

Max nTPM: 39.1
Min nTPM: 21.4
Sample A Female 39.1
Sample B Female 28.6
Sample C Male 28.2
Sample D Male 21.4
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 23.9
Min nTPM: 18.2
Sample A Female 23.9
Sample B Female 20.2
Sample C Male 23.6
Sample D Male 18.2
Ventral hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 39.5
Min nTPM: 19.1
Sample A Female 32.7
Sample B Female 19.1
Sample C Male 39.5
Sample D Male 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 62.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.3
Samples: 4

Max nTPM: 63.4
Min nTPM: 60.1
Sample A Male 60.1
Sample B Male 62.4
Sample C Female 63.2
Sample D Female 63.4
Hippocampal formation
nTPM: 55.1
Samples: 4

Max nTPM: 60.8
Min nTPM: 49.9
Sample A Male 60.8
Sample B Male 49.9
Sample C Female 52.6
Sample D Female 57.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69672689 Antisense, RP_050428_04_C10, Mouse strain C57BL/6J (56 days, male) 3.1

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