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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Neuronal projections: Not detected
Synapses: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:61.7 nTPM
HPA Brain:235.1 nTPM
GTEx:61.7 nTPM
FANTOM5:414.2 Scaled Tags Per Million
Pig:218.4 nTPM
Mouse:393.2 nTPM
Allen mouse:6.3 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA051160
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections Not detected
Synapses High

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051160
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

235.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 209.4
1857 Female, age 85, left hemisphere 292.2
2289 Male, age 61, right hemisphere 255.1
1854 Male, age 80, left hemisphere 250.9
2290 Female, age 72, unknown 241.1
2846 Female, age 79, unknown 224.4
1781 Male, age 74, unknown 148.0
2288 Male, age 75, left hemisphere 145.6
2481 Female, age 94, left hemisphere 117.5
Globus pallidus, externus
nTPM: 30.7
2646 Male, age 61, right hemisphere 46.7
2395 Male, age 75, both hemispheres 33.5
2772 Female, age 79, unknown 27.3
2567 Female, age 72, unknown 25.0
1996 Male, age 80, right hemisphere 21.0
Globus pallidus, internus
nTPM: 27.3
2483 Female, age 94, right hemisphere 65.9
1818 Male, age 74, unknown 26.9
2037 Male, age 80, right hemisphere 23.1
2287 Male, age 75, right hemisphere 22.4
2566 Female, age 72, unknown 21.8
2111 Female, age 85, right hemisphere 15.8
2778 Female, age 91, both hemispheres 15.1
Nucleus accumbens
nTPM: 235.1
1856 Female, age 91, right hemisphere 402.6
2824 Male, age 61, right hemisphere 340.0
1806 Female, age 85, left hemisphere 281.6
1783 Male, age 74, unknown 267.9
2698 Female, age 72, unknown 225.6
2286 Male, age 75, left hemisphere 136.4
2391 Female, age 94, left hemisphere 117.3
2732 Male, age 80, right hemisphere 109.8
Nucleus basalis of Meynert
nTPM: 150.5
2484 Female, age 94, left hemisphere 222.3
2393 Male, age 80, right hemisphere 207.7
2821 Male, age 75, both hemispheres 109.6
2569 Male, age 61, both hemispheres 62.4
Nucleus of the diagonal band
nTPM: 55.8
1979 Male, age 74, unknown 104.7
1812 Female, age 91, both hemispheres 61.3
2195 Female, age 85, both hemispheres 45.6
2775 Male, age 80, right hemisphere 34.1
2029 Male, age 61, right hemisphere 33.5
Putamen
nTPM: 225.0
1838 Male, age 80, right hemisphere 353.2
1937 Female, age 91, right hemisphere 314.4
1829 Male, age 74, unknown 241.0
2466 Female, age 79, unknown 235.3
2489 Female, age 72, unknown 183.5
2482 Female, age 94, left hemisphere 136.6
2647 Male, age 75, left hemisphere 111.0
Septal nuclei
nTPM: 54.1
2394 Male, age 61, left hemisphere 71.7
1960 Male, age 74, unknown 63.1
2199 Male, age 80, right hemisphere 58.9
2059 Female, age 85, both hemispheres 56.5
2009 Female, age 91, both hemispheres 49.8
2031 Female, age 72, unknown 45.4
2629 Female, age 94, right hemisphere 33.6
Stria terminalis, bed nucleus
nTPM: 54.8
2486 Female, age 94, both hemispheres 87.8
2201 Male, age 74, unknown 50.4
1974 Female, age 91, both hemispheres 26.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 41.5
Samples: 246

Max nTPM: 125.8
Min nTPM: 4.1
Std nTPM: 26.6
Median nTPM: 36.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 125.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 105.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 104.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 104.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 103.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 103.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 98.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 94.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 91.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 90.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 89.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 88.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 87.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 87.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 86.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 86.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 84.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 79.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 77.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 77.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 77.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 76.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 75.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 75.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 75.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 74.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 74.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 74.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 74.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 73.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 72.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 72.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 70.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 70.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 70.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 70.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 69.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 69.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 69.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 68.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 68.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 67.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 66.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 66.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 65.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 64.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 63.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 63.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 62.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 62.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 61.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 61.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 60.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 60.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 59.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 59.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 59.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 58.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 58.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 58.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 57.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 56.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 56.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 56.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 54.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 54.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 53.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 53.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 53.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 53.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 52.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 52.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 51.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 51.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 50.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 49.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 48.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 48.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 48.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 47.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 47.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 47.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 47.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 47.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 47.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 47.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 45.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 44.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 44.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 44.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 44.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 43.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 43.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 41.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 41.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 40.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 40.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 39.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 38.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 38.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 38.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 38.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 37.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 37.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 36.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 35.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 35.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 34.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 34.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 34.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 33.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 33.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 33.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 32.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 32.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 32.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 32.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 32.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 32.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 32.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 31.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 31.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 31.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 31.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 30.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 30.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 30.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 29.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 29.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 29.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 27.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 27.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 27.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 26.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 26.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 26.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 25.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 25.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 25.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 24.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 22.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 22.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 22.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 22.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 21.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 21.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 20.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 20.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 20.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 19.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 19.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 19.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 19.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 19.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 19.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 18.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 18.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 18.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 17.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 17.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 17.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 17.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 17.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 16.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 16.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 16.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 16.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 16.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 16.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 15.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 15.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 14.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 14.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 14.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 13.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 13.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 13.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 13.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 13.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 12.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 12.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 12.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 12.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 11.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 11.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 11.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 11.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 10.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 10.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 10.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 9.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 9.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 8.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 8.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 8.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 8.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 7.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 7.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 7.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 7.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 7.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 6.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 6.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 5.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 5.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 4.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 61.7
Samples: 246

Max nTPM: 184.4
Min nTPM: 4.3
Std nTPM: 36.3
Median nTPM: 66.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 184.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 181.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 158.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 137.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 132.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 132.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 132.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 129.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 123.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 123.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 117.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 117.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 117.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 116.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 116.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 114.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 114.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 113.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 113.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 112.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 112.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 112.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 111.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 110.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 106.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 106.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 106.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 106.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 106.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 105.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 105.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 103.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 102.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 102.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 98.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 97.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 97.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 97.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 97.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 96.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 95.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 95.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 95.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 94.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 94.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 93.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 92.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 92.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 91.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 91.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 91.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 90.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 90.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 90.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 90.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 89.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 88.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 88.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 87.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 87.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 86.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 86.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 85.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 85.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 84.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 84.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 82.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 82.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 82.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 82.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 82.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 82.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 80.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 80.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 79.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 79.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 79.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 78.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 78.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 78.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 78.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 77.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 77.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 77.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 76.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 76.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 76.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 76.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 76.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 75.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 75.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 75.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 75.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 75.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 75.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 74.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 74.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 74.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 73.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 73.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 73.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 73.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 72.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 72.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 71.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 71.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 70.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 70.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 70.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 70.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 69.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 69.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 69.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 69.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 68.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 68.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 68.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 67.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 67.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 67.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 66.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 66.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 66.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 65.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 65.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 65.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 63.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 63.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 62.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 61.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 61.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 61.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 61.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 60.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 59.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 58.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 58.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 56.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 56.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 56.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 55.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 54.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 54.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 53.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 53.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 53.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 52.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 52.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 51.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 51.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 51.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 51.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 49.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 48.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 47.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 47.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 47.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 47.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 46.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 42.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 41.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 41.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 40.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 39.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 39.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 38.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 38.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 38.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 36.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 34.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 34.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 34.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 32.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 32.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 31.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 30.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 30.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 30.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 29.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 29.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 28.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 27.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 26.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 25.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 25.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 25.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 24.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 24.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 24.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 23.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 23.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 22.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 22.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 21.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 20.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 20.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 19.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 19.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 18.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 17.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 16.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 15.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 15.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 15.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 15.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 14.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 14.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 14.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 13.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 13.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 13.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 12.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 12.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 12.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 12.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 12.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 11.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 11.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 11.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 10.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 9.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 9.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 9.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 9.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 8.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 7.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 7.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 7.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 7.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 6.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 5.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4.3
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Brain - Putamen (basal ganglia)
Average nTPM: 39.3
Samples: 205

Max nTPM: 112.5
Min nTPM: 3.6
Std nTPM: 26.9
Median nTPM: 34.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 112.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 102.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 102.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 97.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 94.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 94.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 92.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 92.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 90.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 88.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 85.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 84.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 84.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 83.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 83.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 82.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 82.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 81.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 81.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 80.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 79.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 76.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 76.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 76.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 76.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 76.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 75.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 75.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 74.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 74.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 74.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 72.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 72.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 70.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 70.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 68.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 68.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 68.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 67.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 66.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 66.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 66.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 66.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 65.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 65.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 65.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 63.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 62.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 61.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 60.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 60.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 60.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 58.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 58.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 57.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 56.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 55.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 54.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 53.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 53.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 51.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 50.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 50.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 50.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 49.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 49.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 48.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 48.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 48.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 47.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 47.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 47.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 45.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 45.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 44.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 44.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 43.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 42.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 42.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 41.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 41.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 41.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 41.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 40.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 40.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 40.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 40.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 39.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 39.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 38.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 37.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 36.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 36.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 36.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 36.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 35.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 34.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 34.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 34.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 34.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 33.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 33.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 32.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 32.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 32.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 30.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 30.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 30.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 30.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 29.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 29.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 28.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 28.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 28.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 27.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 27.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 27.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 27.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 26.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 25.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 25.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 24.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 24.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 24.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 24.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 23.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 23.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 22.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 22.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 21.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 21.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 20.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 20.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 20.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 19.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 19.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 19.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 19.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 18.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 18.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 17.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 17.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 17.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 17.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 15.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 15.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 15.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 15.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 14.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 14.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 14.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 13.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 12.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 12.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 12.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 12.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 11.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 11.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 10.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 10.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 10.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 10.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 9.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 9.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 9.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 8.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 8.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 8.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 7.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 7.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 7.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 7.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 6.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 5.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 4.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 4.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

414.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 354.2
FF:10164-103B2 76 years, female 354.2
Nucleus accumbens
Scaled Tags Per Million: 197.7
FF:10037-101F1 23-56 years, mixed 197.7
Putamen
Scaled Tags Per Million: 414.2
FF:10176-103C5 60 years, female 414.2
Globus pallidus
Scaled Tags Per Million: 71.9
FF:10175-103C4 60 years, female 105.9
FF:10161-103A8 76 years, female 38.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.4
Pig sample Sample description nTPM
Caudate
nTPM: 218.4
Samples: 4

Max nTPM: 266.0
Min nTPM: 170.8
Sample A Female 170.8
Sample B Female 215.6
Sample C Male 266.0
Sample D Male 221.3
Putamen
nTPM: 201.0
Samples: 4

Max nTPM: 283.2
Min nTPM: 65.2
Sample A Female 65.2
Sample B Female 217.7
Sample C Male 283.2
Sample D Male 237.8
Septum
nTPM: 108.9
Samples: 4

Max nTPM: 177.7
Min nTPM: 4.6
Sample A Female 176.3
Sample B Female 177.7
Sample C Male 4.6
Sample D Male 76.8
Ventral pallidum
nTPM: 148.5
Samples: 4

Max nTPM: 222.4
Min nTPM: 36.4
Sample A Female 222.4
Sample B Female 169.9
Sample C Male 36.4
Sample D Male 165.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

393.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 393.3
Samples: 4

Max nTPM: 423.4
Min nTPM: 371.5
Sample A Male 423.4
Sample B Male 404.7
Sample C Female 371.5
Sample D Female 373.4
Septum
nTPM: 131.2
Samples: 4

Max nTPM: 146.5
Min nTPM: 116.0
Sample A Male 130.3
Sample B Male 132.1
Sample C Female 116.0
Sample D Female 146.5
Ventral forebrain
nTPM: 267.9
Samples: 4

Max nTPM: 286.4
Min nTPM: 249.4
Sample A Male 263.6
Sample B Male 272.0
Sample C Female 249.4
Sample D Female 286.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.3
69734482 Antisense, RP_050503_01_A06, Mouse strain C57BL/6J (56 days, male) 9.7
72472807 Antisense, RP_051101_02_F11, Mouse strain C57BL/6J (56 days, male) 7.7
71670716 Antisense, RP_050524_03_A10, Mouse strain C57BL/6J (56 days, male) 1.6
70228221 Antisense, RP_050524_03_A10, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 2.2
69734482 Antisense, RP_050503_01_A06, Mouse strain C57BL/6J (56 days, male) 3.1
72472807 Antisense, RP_051101_02_F11, Mouse strain C57BL/6J (56 days, male) 3.1
71670716 Antisense, RP_050524_03_A10, Mouse strain C57BL/6J (56 days, male) 0.5
70228221 Antisense, RP_050524_03_A10, Mouse strain C57BL/6J (56 days, male) 0.4

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