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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:63.1 nTPM
HPA Brain:94.3 nTPM
GTEx:63.1 nTPM
FANTOM5:88.9 Scaled Tags Per Million
Pig:33.0 nTPM
Mouse:64.8 nTPM
Allen mouse:6.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030047
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 74.1
2481 Female, age 94, left hemisphere 85.4
2290 Female, age 72, unknown 78.9
1781 Male, age 74, unknown 78.8
2289 Male, age 61, right hemisphere 77.7
2288 Male, age 75, left hemisphere 76.8
1857 Female, age 85, left hemisphere 70.1
2846 Female, age 79, unknown 63.2
1854 Male, age 80, left hemisphere 62.1
Globus pallidus, externus
nTPM: 94.1
1996 Male, age 80, right hemisphere 107.9
2772 Female, age 79, unknown 107.0
2395 Male, age 75, both hemispheres 92.8
2646 Male, age 61, right hemisphere 90.1
2567 Female, age 72, unknown 72.5
Globus pallidus, internus
nTPM: 94.3
2287 Male, age 75, right hemisphere 113.7
2778 Female, age 91, both hemispheres 105.4
2111 Female, age 85, right hemisphere 104.2
2483 Female, age 94, right hemisphere 90.0
2566 Female, age 72, unknown 83.4
2037 Male, age 80, right hemisphere 82.8
1818 Male, age 74, unknown 80.5
Nucleus accumbens
nTPM: 69.7
1806 Female, age 85, left hemisphere 80.0
1783 Male, age 74, unknown 79.2
2732 Male, age 80, right hemisphere 78.6
2286 Male, age 75, left hemisphere 76.3
2391 Female, age 94, left hemisphere 75.2
2698 Female, age 72, unknown 67.9
1856 Female, age 91, right hemisphere 52.4
2824 Male, age 61, right hemisphere 48.2
Nucleus basalis of Meynert
nTPM: 67.6
2569 Male, age 61, both hemispheres 100.3
2821 Male, age 75, both hemispheres 59.6
2484 Female, age 94, left hemisphere 58.8
2393 Male, age 80, right hemisphere 51.5
Nucleus of the diagonal band
nTPM: 81.9
2775 Male, age 80, right hemisphere 93.7
1812 Female, age 91, both hemispheres 89.9
2195 Female, age 85, both hemispheres 81.5
2029 Male, age 61, right hemisphere 75.5
1979 Male, age 74, unknown 68.9
Putamen
nTPM: 61.4
2482 Female, age 94, left hemisphere 75.3
2489 Female, age 72, unknown 67.4
2647 Male, age 75, left hemisphere 61.9
2466 Female, age 79, unknown 58.9
1937 Female, age 91, right hemisphere 56.2
1829 Male, age 74, unknown 55.7
1838 Male, age 80, right hemisphere 54.8
Septal nuclei
nTPM: 73.0
2031 Female, age 72, unknown 91.3
1960 Male, age 74, unknown 87.4
2059 Female, age 85, both hemispheres 80.9
2199 Male, age 80, right hemisphere 69.4
2009 Female, age 91, both hemispheres 64.6
2629 Female, age 94, right hemisphere 60.2
2394 Male, age 61, left hemisphere 57.3
Stria terminalis, bed nucleus
nTPM: 68.8
1974 Female, age 91, both hemispheres 76.0
2486 Female, age 94, both hemispheres 70.9
2201 Male, age 74, unknown 59.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 60.9
Samples: 246

Max nTPM: 113.5
Min nTPM: 20.3
Std nTPM: 14.4
Median nTPM: 60.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 113.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 110.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 105.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 105.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 101.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 97.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 95.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 93.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 93.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 92.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 91.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 90.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 88.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 84.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 82.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 79.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 79.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 78.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 78.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 77.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 77.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 77.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 77.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 76.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 76.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 76.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 76.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 75.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 75.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 75.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 74.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 74.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 73.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 73.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 73.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 73.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 72.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 72.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 72.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 71.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 71.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 71.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 71.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 71.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 70.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 70.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 70.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 70.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 69.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 69.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 69.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 69.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 69.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 69.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 68.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 68.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 68.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 68.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 68.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 68.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 68.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 67.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 67.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 67.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 66.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 66.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 66.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 66.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 66.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 65.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 65.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 65.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 65.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 65.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 65.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 65.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 65.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 64.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 64.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 64.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 64.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 63.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 63.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 63.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 63.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 63.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 62.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 62.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 62.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 62.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 62.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 62.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 61.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 61.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 61.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 61.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 61.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 61.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 61.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 61.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 61.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 60.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 60.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 60.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 60.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 59.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 59.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 59.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 59.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 58.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 58.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 58.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 58.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 58.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 57.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 57.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 57.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 57.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 57.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 57.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 57.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 56.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 55.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 55.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 55.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 55.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 55.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 54.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 54.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 54.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 54.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 54.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 54.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 53.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 53.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 53.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 53.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 53.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 53.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 52.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 52.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 52.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 52.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 52.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 52.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 52.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 51.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 51.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 51.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 50.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 50.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 50.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 50.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 50.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 49.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 49.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 49.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 48.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 48.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 48.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 48.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 47.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 47.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 46.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 46.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 46.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 45.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 45.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 44.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 44.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 44.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 43.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 43.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 43.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 42.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 42.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 41.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 41.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 41.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 40.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 39.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 38.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 36.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 35.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 33.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 32.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 30.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 30.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 25.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 20.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 58.9
Samples: 246

Max nTPM: 140.8
Min nTPM: 23.4
Std nTPM: 13.6
Median nTPM: 59.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 140.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 102.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 94.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 89.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 87.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 86.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 82.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 82.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 82.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 81.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 81.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 80.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 79.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 79.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 78.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 78.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 77.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 76.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 75.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 74.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 74.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 73.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 73.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 73.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 73.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 73.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 72.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 72.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 72.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 72.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 72.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 72.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 72.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 71.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 71.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 71.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 71.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 71.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 71.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 70.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 69.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 69.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 69.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 69.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 68.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 68.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 68.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 68.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 68.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 68.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 68.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 67.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 67.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 67.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 67.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 67.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 67.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 66.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 66.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 66.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 66.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 66.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 66.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 65.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 65.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 65.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 65.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 64.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 64.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 64.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 64.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 64.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 64.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 64.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 64.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 64.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 64.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 64.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 64.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 64.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 63.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 63.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 63.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 63.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 63.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 63.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 63.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 62.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 62.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 62.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 62.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 62.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 62.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 61.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 61.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 61.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 61.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 61.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 61.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 61.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 61.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 61.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 60.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 60.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 60.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 60.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 60.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 60.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 60.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 60.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 60.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 60.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 59.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 59.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 59.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 59.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 59.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 59.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 59.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 59.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 59.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 58.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 58.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 58.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 58.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 58.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 58.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 58.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 58.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 58.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 58.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 57.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 57.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 57.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 57.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 57.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 57.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 57.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 57.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 56.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 56.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 56.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 56.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 56.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 56.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 56.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 56.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 55.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 55.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 55.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 55.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 54.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 54.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 54.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 54.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 53.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 53.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 53.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 53.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 53.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 53.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 53.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 53.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 52.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 52.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 52.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 52.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 51.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 51.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 51.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 51.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 51.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 51.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 51.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 50.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 50.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 50.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 50.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 50.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 50.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 49.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 49.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 48.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 48.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 48.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 47.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 47.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 47.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 46.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 46.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 46.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 45.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 45.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 45.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 45.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 45.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 44.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 44.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 44.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 44.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 44.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 43.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 43.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 43.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 43.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 42.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 42.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 42.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 42.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 41.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 41.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 40.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 40.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 40.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 40.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 39.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 39.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 39.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 39.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 38.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 38.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 37.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 37.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 37.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 37.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 36.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 36.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 33.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 33.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 30.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 28.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 27.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 24.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 23.4
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Brain - Putamen (basal ganglia)
Average nTPM: 63.1
Samples: 205

Max nTPM: 121.9
Min nTPM: 27.0
Std nTPM: 15.8
Median nTPM: 61.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 121.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 115.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 107.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 105.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 101.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 100.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 99.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 97.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 94.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 93.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 93.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 90.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 89.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 89.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 88.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 86.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 85.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 85.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 84.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 84.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 83.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 83.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 81.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 81.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 81.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 80.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 79.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 78.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 78.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 78.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 78.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 78.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 77.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 77.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 77.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 76.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 76.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 75.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 75.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 74.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 74.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 72.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 72.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 72.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 72.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 71.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 71.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 71.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 71.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 71.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 70.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 70.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 70.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 70.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 69.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 69.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 69.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 69.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 69.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 68.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 68.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 68.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 67.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 67.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 67.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 67.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 67.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 67.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 67.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 67.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 66.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 66.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 66.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 66.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 65.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 65.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 65.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 65.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 65.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 65.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 65.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 64.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 64.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 64.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 64.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 63.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 63.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 63.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 63.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 62.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 62.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 62.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 62.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 62.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 61.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 61.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 61.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 61.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 61.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 60.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 60.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 60.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 60.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 60.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 60.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 58.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 58.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 58.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 58.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 58.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 57.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 57.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 57.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 57.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 57.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 57.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 56.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 56.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 56.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 56.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 56.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 56.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 56.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 56.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 56.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 56.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 55.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 55.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 55.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 55.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 55.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 55.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 54.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 54.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 54.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 54.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 53.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 53.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 53.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 53.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 53.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 52.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 52.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 52.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 52.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 52.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 51.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 51.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 51.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 50.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 50.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 50.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 49.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 49.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 49.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 49.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 47.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 47.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 47.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 46.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 46.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 46.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 46.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 46.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 45.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 45.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 44.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 44.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 43.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 43.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 43.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 43.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 43.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 43.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 42.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 40.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 40.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 39.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 38.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 38.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 38.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 35.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 34.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 29.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 28.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 27.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

88.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 88.9
FF:10164-103B2 76 years, female 88.9
Nucleus accumbens
Scaled Tags Per Million: 84.3
FF:10037-101F1 23-56 years, mixed 84.3
Putamen
Scaled Tags Per Million: 65.1
FF:10176-103C5 60 years, female 65.1
Globus pallidus
Scaled Tags Per Million: 83.2
FF:10161-103A8 76 years, female 89.5
FF:10175-103C4 60 years, female 76.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.0
Pig sample Sample description nTPM
Caudate
nTPM: 26.2
Samples: 4

Max nTPM: 31.2
Min nTPM: 20.3
Sample A Female 23.1
Sample B Female 31.2
Sample C Male 30.3
Sample D Male 20.3
Putamen
nTPM: 24.9
Samples: 4

Max nTPM: 27.9
Min nTPM: 20.2
Sample A Female 26.9
Sample B Female 20.2
Sample C Male 27.9
Sample D Male 24.4
Septum
nTPM: 33.0
Samples: 4

Max nTPM: 44.0
Min nTPM: 28.3
Sample A Female 30.2
Sample B Female 28.3
Sample C Male 44.0
Sample D Male 29.6
Ventral pallidum
nTPM: 27.9
Samples: 4

Max nTPM: 39.7
Min nTPM: 21.5
Sample A Female 22.7
Sample B Female 27.7
Sample C Male 39.7
Sample D Male 21.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 58.1
Samples: 4

Max nTPM: 61.2
Min nTPM: 51.8
Sample A Male 60.8
Sample B Male 61.2
Sample C Female 51.8
Sample D Female 58.5
Septum
nTPM: 61.1
Samples: 4

Max nTPM: 63.8
Min nTPM: 54.4
Sample A Male 63.8
Sample B Male 62.6
Sample C Female 63.6
Sample D Female 54.4
Ventral forebrain
nTPM: 64.8
Samples: 4

Max nTPM: 70.1
Min nTPM: 59.7
Sample A Male 64.7
Sample B Male 59.7
Sample C Female 70.1
Sample D Female 64.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.7
68341860 Antisense, RP_041207_02_C12, Mouse strain C57BL/6J (56 days, male) 9.8
795 Antisense, RP_Baylor_102958, Mouse strain C57BL/6J (56 days, male) 3.7
Pallidum
Expression energy: 6.6
68341860 Antisense, RP_041207_02_C12, Mouse strain C57BL/6J (56 days, male) 9.3
795 Antisense, RP_Baylor_102958, Mouse strain C57BL/6J (56 days, male) 3.9

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