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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:49.5 nTPM
HPA Brain:58.8 nTPM
GTEx:49.5 nTPM
FANTOM5:27.5 Scaled Tags Per Million
Pig:46.0 nTPM
Mouse:119.8 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002891Antibody CAB003765Antibody CAB080436
Glial cells MediumLowLow
Neuronal cells MediumHighMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 54.3
2290 Female, age 72, unknown 60.7
1857 Female, age 85, left hemisphere 59.0
2846 Female, age 79, unknown 56.9
1781 Male, age 74, unknown 55.8
1854 Male, age 80, left hemisphere 53.3
2481 Female, age 94, left hemisphere 51.1
2288 Male, age 75, left hemisphere 48.9
2289 Male, age 61, right hemisphere 48.8
Globus pallidus, externus
nTPM: 58.8
2567 Female, age 72, unknown 66.8
1996 Male, age 80, right hemisphere 61.4
2772 Female, age 79, unknown 59.8
2646 Male, age 61, right hemisphere 55.0
2395 Male, age 75, both hemispheres 50.8
Globus pallidus, internus
nTPM: 56.6
2483 Female, age 94, right hemisphere 65.6
2566 Female, age 72, unknown 61.3
2037 Male, age 80, right hemisphere 57.0
2287 Male, age 75, right hemisphere 54.7
1818 Male, age 74, unknown 54.5
2111 Female, age 85, right hemisphere 53.3
2778 Female, age 91, both hemispheres 49.8
Nucleus accumbens
nTPM: 52.2
1783 Male, age 74, unknown 61.4
1806 Female, age 85, left hemisphere 56.7
2732 Male, age 80, right hemisphere 55.7
1856 Female, age 91, right hemisphere 53.2
2698 Female, age 72, unknown 51.2
2286 Male, age 75, left hemisphere 50.0
2391 Female, age 94, left hemisphere 46.2
2824 Male, age 61, right hemisphere 43.3
Nucleus basalis of Meynert
nTPM: 53.6
2569 Male, age 61, both hemispheres 60.1
2484 Female, age 94, left hemisphere 53.7
2393 Male, age 80, right hemisphere 50.8
2821 Male, age 75, both hemispheres 49.7
Nucleus of the diagonal band
nTPM: 54.2
1979 Male, age 74, unknown 57.8
2195 Female, age 85, both hemispheres 57.6
2775 Male, age 80, right hemisphere 55.3
1812 Female, age 91, both hemispheres 51.1
2029 Male, age 61, right hemisphere 49.0
Putamen
nTPM: 58.1
2489 Female, age 72, unknown 69.0
2647 Male, age 75, left hemisphere 66.1
2482 Female, age 94, left hemisphere 59.8
2466 Female, age 79, unknown 59.0
1829 Male, age 74, unknown 55.9
1937 Female, age 91, right hemisphere 49.9
1838 Male, age 80, right hemisphere 47.2
Septal nuclei
nTPM: 55.3
1960 Male, age 74, unknown 65.2
2059 Female, age 85, both hemispheres 61.2
2199 Male, age 80, right hemisphere 57.4
2031 Female, age 72, unknown 52.7
2394 Male, age 61, left hemisphere 51.4
2009 Female, age 91, both hemispheres 50.0
2629 Female, age 94, right hemisphere 49.2
Stria terminalis, bed nucleus
nTPM: 50.7
2201 Male, age 74, unknown 52.1
2486 Female, age 94, both hemispheres 50.6
1974 Female, age 91, both hemispheres 49.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 46.6
Samples: 246

Max nTPM: 63.5
Min nTPM: 24.5
Std nTPM: 6.6
Median nTPM: 46.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 63.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 61.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 60.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 60.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 60.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 59.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 59.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 59.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 59.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 58.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 58.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 58.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 57.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 57.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 57.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 57.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 57.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 57.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 56.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 56.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 56.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 55.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 55.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 55.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 55.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 55.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 55.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 55.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 54.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 54.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 54.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 54.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 53.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 53.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 53.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 53.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 53.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 53.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 52.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 52.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 52.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 52.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 52.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 52.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 52.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 51.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 51.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 51.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 51.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 51.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 51.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 51.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 51.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 51.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 50.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 50.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 50.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 50.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 50.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 50.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 50.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 50.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 49.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 49.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 49.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 49.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 49.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 49.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 49.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 49.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 49.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 49.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 49.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 49.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 49.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 48.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 48.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 48.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 48.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 48.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 48.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 48.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 48.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 48.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 47.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 47.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 47.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 47.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 47.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 47.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 47.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 47.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 47.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 47.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 47.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 47.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 47.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 47.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 47.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 47.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 47.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 46.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 46.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 46.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 46.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 46.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 46.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 46.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 46.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 46.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 46.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 46.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 46.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 45.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 45.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 45.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 45.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 45.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 45.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 45.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 45.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 45.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 45.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 45.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 44.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 44.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 44.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 44.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 44.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 44.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 44.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 44.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 44.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 44.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 44.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 43.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 43.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 43.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 43.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 43.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 43.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 43.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 43.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 43.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 43.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 43.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 43.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 43.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 43.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 43.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 43.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 42.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 42.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 42.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 42.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 42.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 42.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 42.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 42.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 41.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 41.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 41.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 41.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 41.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 41.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 41.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 41.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 41.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 41.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 41.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 41.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 40.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 40.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 40.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 40.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 40.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 40.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 40.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 40.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 39.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 39.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 39.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 39.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 39.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 39.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 38.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 38.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 37.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 37.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 36.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 36.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 36.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 36.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 36.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 35.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 35.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 34.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 33.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 33.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 32.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 31.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 31.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 30.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 30.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 24.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 46.6
Samples: 246

Max nTPM: 80.1
Min nTPM: 29.5
Std nTPM: 7.6
Median nTPM: 45.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 80.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 77.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 76.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 68.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 68.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 65.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 64.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 62.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 62.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 59.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 59.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 58.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 58.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 57.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 57.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 57.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 57.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 57.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 56.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 56.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 56.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 56.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 56.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 55.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 55.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 55.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 55.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 55.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 55.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 55.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 54.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 54.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 54.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 54.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 54.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 54.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 54.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 54.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 54.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 53.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 53.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 53.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 53.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 53.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 52.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 52.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 52.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 52.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 52.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 51.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 51.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 51.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 50.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 50.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 50.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 50.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 50.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 50.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 50.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 50.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 50.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 50.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 50.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 49.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 49.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 49.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 49.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 49.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 49.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 49.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 49.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 49.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 49.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 49.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 48.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 48.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 48.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 48.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 48.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 48.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 48.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 48.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 48.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 48.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 48.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 48.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 47.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 47.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 47.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 47.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 47.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 47.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 47.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 47.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 47.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 47.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 47.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 47.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 47.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 47.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 47.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 46.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 46.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 46.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 46.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 46.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 46.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 46.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 46.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 46.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 46.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 46.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 46.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 46.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 45.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 45.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 45.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 45.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 45.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 45.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 45.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 45.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 45.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 45.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 45.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 45.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 45.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 45.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 45.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 45.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 45.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 44.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 44.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 44.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 44.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 44.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 44.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 44.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 44.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 44.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 44.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 44.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 44.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 44.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 44.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 44.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 44.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 44.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 43.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 43.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 43.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 43.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 43.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 43.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 43.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 43.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 42.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 42.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 42.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 42.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 42.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 42.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 42.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 42.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 42.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 42.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 42.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 42.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 42.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 42.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 41.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 41.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 41.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 41.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 41.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 41.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 41.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 41.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 41.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 41.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 41.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 41.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 41.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 41.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 41.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 40.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 40.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 40.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 40.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 40.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 40.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 40.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 40.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 40.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 39.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 39.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 39.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 39.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 39.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 38.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 38.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 38.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 38.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 38.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 38.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 38.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 37.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 37.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 37.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 37.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 37.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 37.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 37.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 37.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 37.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 36.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 36.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 36.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 36.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 36.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 34.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 34.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 34.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 34.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 34.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 33.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 33.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 33.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 33.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 30.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 29.5
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Brain - Putamen (basal ganglia)
Average nTPM: 49.5
Samples: 205

Max nTPM: 73.0
Min nTPM: 29.0
Std nTPM: 6.8
Median nTPM: 48.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 73.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 68.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 66.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 65.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 62.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 62.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 61.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 60.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 60.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 60.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 60.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 59.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 59.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 58.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 58.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 58.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 58.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 58.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 58.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 58.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 57.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 57.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 56.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 56.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 56.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 56.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 56.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 56.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 56.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 55.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 55.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 55.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 55.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 55.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 55.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 54.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 54.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 54.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 54.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 54.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 54.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 54.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 53.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 53.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 53.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 53.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 53.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 53.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 52.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 52.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 52.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 52.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 52.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 52.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 52.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 52.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 52.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 51.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 51.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 51.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 51.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 51.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 50.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 50.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 50.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 50.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 50.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 50.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 50.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 50.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 50.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 50.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 50.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 50.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 50.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 49.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 49.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 49.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 49.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 49.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 49.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 49.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 49.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 49.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 49.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 49.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 49.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 48.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 48.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 48.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 48.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 48.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 48.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 48.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 48.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 48.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 48.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 48.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 48.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 48.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 48.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 48.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 48.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 48.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 47.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 47.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 47.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 47.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 47.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 47.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 47.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 47.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 47.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 47.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 47.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 47.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 47.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 46.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 46.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 46.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 46.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 46.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 46.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 46.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 46.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 46.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 46.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 46.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 46.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 46.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 45.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 45.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 45.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 45.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 45.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 45.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 45.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 44.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 44.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 44.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 44.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 44.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 44.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 44.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 44.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 44.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 43.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 43.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 43.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 43.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 43.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 43.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 42.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 42.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 42.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 42.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 42.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 42.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 41.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 41.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 41.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 41.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 41.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 40.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 40.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 40.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 40.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 40.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 39.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 39.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 37.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 36.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 35.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 35.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 35.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 35.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 34.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 30.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 29.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 27.5
FF:10164-103B2 76 years, female 27.5
Nucleus accumbens
Scaled Tags Per Million: 26.3
FF:10037-101F1 23-56 years, mixed 26.3
Putamen
Scaled Tags Per Million: 18.8
FF:10176-103C5 60 years, female 18.8
Globus pallidus
Scaled Tags Per Million: 20.0
FF:10161-103A8 76 years, female 29.9
FF:10175-103C4 60 years, female 10.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.0
Pig sample Sample description nTPM
Caudate
nTPM: 44.3
Samples: 4

Max nTPM: 53.1
Min nTPM: 38.3
Sample A Female 39.6
Sample B Female 53.1
Sample C Male 46.0
Sample D Male 38.3
Putamen
nTPM: 39.9
Samples: 4

Max nTPM: 54.6
Min nTPM: 28.1
Sample A Female 54.6
Sample B Female 35.3
Sample C Male 28.1
Sample D Male 41.4
Septum
nTPM: 45.7
Samples: 4

Max nTPM: 55.6
Min nTPM: 27.1
Sample A Female 55.6
Sample B Female 46.7
Sample C Male 53.2
Sample D Male 27.1
Ventral pallidum
nTPM: 46.0
Samples: 4

Max nTPM: 57.9
Min nTPM: 37.7
Sample A Female 37.7
Sample B Female 48.9
Sample C Male 57.9
Sample D Male 39.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 119.8
Samples: 4

Max nTPM: 127.3
Min nTPM: 110.9
Sample A Male 117.9
Sample B Male 127.3
Sample C Female 110.9
Sample D Female 123.0
Septum
nTPM: 85.6
Samples: 4

Max nTPM: 91.8
Min nTPM: 82.4
Sample A Male 91.8
Sample B Male 85.6
Sample C Female 82.6
Sample D Female 82.4
Ventral forebrain
nTPM: 105.5
Samples: 4

Max nTPM: 110.7
Min nTPM: 100.5
Sample A Male 104.8
Sample B Male 110.7
Sample C Female 106.0
Sample D Female 100.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.0
75988255 Antisense, RP_060606_02_E05, Mouse strain C57BL/6J (56 days, male) 7.0
Pallidum
Expression energy: 7.9
75988255 Antisense, RP_060606_02_E05, Mouse strain C57BL/6J (56 days, male) 7.9

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