PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:71.1 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:57.3 nTPM
Mouse:96.6 nTPM
Allen mouse:7.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 71.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 48.3
2090 Male, age 80, both hemispheres 52.2
1984 Male, age 76, both hemispheres 49.3
2301 Female, age 85, both hemispheres 46.1
2188 Female, age 91, both hemispheres 45.6
Area postrema
nTPM: 71.1
2799 Male, age 61, both hemispheres 86.4
2306 Male, age 80, both hemispheres 69.8
2054 Male, age 76, both hemispheres 57.0
Dorsal cochlear nucleus
nTPM: 59.6
2058 Male, age 76, both hemispheres 66.9
2802 Male, age 74, right hemisphere 66.6
2378 Male, age 80, both hemispheres 58.3
2370 Male, age 61, both hemispheres 54.7
2187 Female, age 91, both hemispheres 51.6
Dorsal medullary reticular nucleus
nTPM: 57.9
2088 Male, age 76, both hemispheres 65.8
2040 Female, age 85, both hemispheres 55.4
2373 Male, age 61, both hemispheres 52.5
Dorsal motor vagal complex
nTPM: 66.5
2797 Male, age 61, both hemispheres 81.7
2643 Male, age 74, both hemispheres 77.4
2185 Male, age 76, both hemispheres 76.9
2844 Male, age 55, unknown 69.1
2133 Female, age 91, both hemispheres 59.3
2000 Male, age 74, unknown 56.7
2813 Female, age 72, unknown 56.3
2807 Female, age 85, both hemispheres 54.6
Dorsal tegmental nucleus
nTPM: 58.3
2358 Male, age 61, both hemispheres 69.7
2083 Male, age 80, both hemispheres 60.6
1936 Male, age 76, left hemisphere 51.8
2326 Male, age 74, both hemispheres 51.1
Dorsolateral tegmental area
nTPM: 57.7
2337 Male, age 61, both hemispheres 70.6
2141 Male, age 76, both hemispheres 64.0
2654 Male, age 80, both hemispheres 59.1
2751 Female, age 85, both hemispheres 48.4
2360 Male, age 74, both hemispheres 46.4
Gigantocellular reticular nuclei, medullary
nTPM: 53.0
2022 Male, age 76, right hemisphere 62.9
2310 Male, age 80, both hemispheres 53.3
2314 Male, age 61, both hemispheres 51.4
1876 Female, age 85, both hemispheres 50.3
2462 Male, age 74, both hemispheres 50.2
2387 Female, age 91, both hemispheres 50.1
Gigantocellular reticular nuclei, pars
nTPM: 52.0
2084 Female, age 85, both hemispheres 59.3
2336 Male, age 61, both hemispheres 53.8
2706 Male, age 80, both hemispheres 50.4
2330 Male, age 80, both hemispheres 49.6
2168 Male, age 76, both hemispheres 46.9
Inferior olive
nTPM: 59.3
2628 Female, age 91, both hemispheres 64.1
2379 Male, age 80, both hemispheres 63.1
2563 Male, age 74, both hemispheres 59.0
2178 Male, age 61, both hemispheres 56.1
2085 Female, age 85, both hemispheres 54.2
Kolliker-Fuse nucleus
nTPM: 48.9
2163 Male, age 80, both hemispheres 54.6
2315 Male, age 76, right hemisphere 48.1
2793 Female, age 91, left hemisphere 44.1
Lateral lemniscal nuclei
nTPM: 46.1
2169 Male, age 76, both hemispheres 52.1
2453 Male, age 74, right hemisphere 48.2
2320 Female, age 91, left hemisphere 47.8
2746 Female, age 85, left hemisphere 43.1
2036 Male, age 80, both hemispheres 39.0
Lateral medullary reticular nucleus
nTPM: 52.3
2852 Male, age 80, both hemispheres 56.4
2804 Female, age 91, both hemispheres 54.6
2190 Female, age 85, both hemispheres 52.8
2374 Male, age 61, both hemispheres 52.3
2044 Male, age 76, both hemispheres 51.3
2305 Male, age 74, both hemispheres 46.3
Lateral parabrachial nucleus
nTPM: 49.1
2790 Male, age 61, both hemispheres 54.3
2139 Female, age 85, right hemisphere 50.8
2792 Male, age 76, both hemispheres 47.3
2013 Male, age 80, both hemispheres 43.9
Lateral vestibular nucleus
nTPM: 57.3
2311 Male, age 80, both hemispheres 59.6
2184 Male, age 76, both hemispheres 54.9
Locus coeruleus
nTPM: 53.1
2123 Female, age 91, both hemispheres 57.8
2162 Male, age 80, both hemispheres 57.4
1980 Male, age 76, both hemispheres 56.5
2317 Female, age 72, unknown 54.1
2720 Male, age 74, both hemispheres 54.0
2014 Male, age 55, unknown 50.1
2788 Male, age 74, unknown 41.8
Medial olivary nucleus
nTPM: 52.5
2138 Female, age 91, both hemispheres 55.1
1962 Male, age 76, both hemispheres 53.1
1943 Male, age 61, both hemispheres 52.6
2851 Male, age 80, both hemispheres 49.3
Medial parabrachial nucleus
nTPM: 53.2
2156 Male, age 61, both hemispheres 60.9
2786 Male, age 76, both hemispheres 58.7
2170 Female, age 91, both hemispheres 51.5
2854 Male, age 80, both hemispheres 47.6
2463 Female, age 85, right hemisphere 47.4
Medial periolivary nuclei
nTPM: 46.8
2063 Male, age 76, both hemispheres 52.3
2081 Male, age 80, both hemispheres 47.3
2171 Female, age 85, both hemispheres 46.7
2458 Female, age 91, both hemispheres 46.3
2791 Male, age 74, right hemisphere 41.3
Medial vestibular nucleus
nTPM: 53.0
2093 Male, age 80, both hemispheres 59.9
2624 Male, age 61, both hemispheres 56.6
2134 Male, age 76, both hemispheres 54.8
2803 Female, age 91, both hemispheres 50.9
2743 Female, age 85, both hemispheres 50.6
2801 Male, age 74, both hemispheres 45.0
Motor facial nucleus
nTPM: 50.1
2062 Male, age 76, both hemispheres 57.3
2795 Female, age 91, both hemispheres 54.7
2126 Male, age 61, both hemispheres 51.7
2327 Male, age 80, both hemispheres 47.1
2365 Male, age 74, right hemisphere 46.5
2697 Female, age 85, both hemispheres 43.0
Motor hypoglossal nucleus
nTPM: 58.2
2182 Male, age 80, both hemispheres 62.6
2277 Male, age 76, both hemispheres 61.0
2132 Female, age 85, both hemispheres 58.6
2125 Female, age 91, both hemispheres 57.5
2461 Male, age 61, both hemispheres 51.5
Motor trigeminal nucleus
nTPM: 49.9
2335 Male, age 61, both hemispheres 55.2
2309 Male, age 76, both hemispheres 51.8
2321 Female, age 91, both hemispheres 49.4
2560 Male, age 74, both hemispheres 48.6
2079 Male, age 80, both hemispheres 44.7
Nuclei of the trapezoid body
nTPM: 47.6
1983 Male, age 76, both hemispheres 50.3
2368 Female, age 91, both hemispheres 50.0
2166 Male, age 80, both hemispheres 48.3
2735 Female, age 85, both hemispheres 45.8
2159 Male, age 61, both hemispheres 43.8
Nucleus ambiguus
nTPM: 67.0
2096 Female, age 85, both hemispheres 79.6
2071 Male, age 76, both hemispheres 54.5
Nucleus cuneatus
nTPM: 63.3
2564 Male, age 74, both hemispheres 75.7
2100 Male, age 76, both hemispheres 75.1
2805 Female, age 91, both hemispheres 72.4
2131 Male, age 76, both hemispheres 67.0
2562 Male, age 61, both hemispheres 64.3
2380 Male, age 80, both hemispheres 59.3
2381 Male, age 80, both hemispheres 57.5
2808 Female, age 85, both hemispheres 52.1
2376 Male, age 61, both hemispheres 45.9
Nucleus gracilis
nTPM: 67.2
2299 Female, age 85, both hemispheres 74.8
2627 Male, age 74, both hemispheres 66.9
2382 Male, age 80, both hemispheres 59.9
Nucleus raphe magnus
nTPM: 48.6
2051 Male, age 76, both hemispheres 51.3
2172 Female, age 85, both hemispheres 50.0
2328 Male, age 80, both hemispheres 49.2
2459 Female, age 91, both hemispheres 47.6
2160 Male, age 61, both hemispheres 47.0
2455 Male, age 74, both hemispheres 46.7
Nucleus raphe obscurus
nTPM: 47.8
2142 Male, age 76, midline 54.5
2800 Male, age 61, midline 46.4
2845 Female, age 85, midline 42.6
Nucleus raphe pallidus
nTPM: 54.8
1924 Male, age 61, midline 58.1
2183 Male, age 80, midline 58.0
2145 Male, age 76, midline 48.3
Nucleus tractus solitarii
nTPM: 58.3
2656 Male, age 76, both hemispheres 66.7
2307 Male, age 80, both hemispheres 63.6
2191 Female, age 85, both hemispheres 61.7
2144 Female, age 91, right hemisphere 41.1
Paramedian reticular nucleus
nTPM: 47.2
2057 Male, age 80, both hemispheres 52.8
2313 Male, age 61, both hemispheres 50.8
2050 Female, age 85, both hemispheres 44.2
2052 Male, age 76, both hemispheres 41.0
Parvicellular reticular nuclei
nTPM: 51.6
2119 Male, age 80, both hemispheres 54.1
2558 Male, age 74, both hemispheres 50.7
2095 Male, age 76, both hemispheres 50.2
Parvicellular reticular nuclei, medullary
nTPM: 61.1
2181 Male, age 80, left hemisphere 63.5
2091 Female, age 85, both hemispheres 62.6
2189 Female, age 91, both hemispheres 57.1
Pedunculopontine tegmental nucleus
nTPM: 51.8
2334 Male, age 80, both hemispheres 54.2
1921 Female, age 85, both hemispheres 51.0
2338 Male, age 61, both hemispheres 50.3
Peritrigeminal nucleus
nTPM: 56.6
2067 Female, age 85, both hemispheres 61.4
2136 Male, age 76, both hemispheres 55.4
2179 Male, age 61, both hemispheres 52.9
Pontine nuclei
nTPM: 46.6
2787 Female, age 85, both hemispheres 54.1
1968 Male, age 76, left hemisphere 52.3
2115 Male, age 80, left hemisphere 49.4
1863 Male, age 55, unknown 48.0
2109 Female, age 72, unknown 45.7
2319 Female, age 91, both hemispheres 44.5
2727 Male, age 61, right hemisphere 40.2
2454 Male, age 74, left hemisphere 39.1
Pontine raphe nucleus
nTPM: 52.9
2853 Male, age 76, midline 57.6
2122 Female, age 85, midline 48.2
Posteroventral cochlear nucleus
nTPM: 52.3
2371 Male, age 61, both hemispheres 60.3
2752 Female, age 85, both hemispheres 56.4
2070 Male, age 76, both hemispheres 52.3
2341 Male, age 80, both hemispheres 47.0
2135 Female, age 91, both hemispheres 45.8
Prepositus hypoglossal nucleus
nTPM: 55.2
2086 Male, age 80, both hemispheres 60.7
2855 Female, age 85, right hemisphere 49.8
Principal sensory trigeminal nucleus
nTPM: 46.3
2324 Male, age 76, both hemispheres 54.7
2158 Male, age 61, both hemispheres 46.9
2367 Female, age 91, left hemisphere 44.1
2008 Male, age 80, left hemisphere 39.4
Reticular pontine nucleus, caudal
nTPM: 48.8
2092 Male, age 76, both hemispheres 51.9
2559 Male, age 74, both hemispheres 51.0
2457 Female, age 91, both hemispheres 49.9
2332 Male, age 80, right hemisphere 42.4
Reticular pontine nucleus, oral
nTPM: 48.5
2167 Male, age 76, both hemispheres 55.2
2361 Male, age 74, both hemispheres 50.1
1939 Male, age 80, both hemispheres 50.0
2012 Female, age 85, both hemispheres 44.2
2366 Female, age 91, both hemispheres 42.8
Reticulotegmental nucleus
nTPM: 55.6
2452 Male, age 74, both hemispheres 58.5
2333 Male, age 80, both hemispheres 58.3
2322 Female, age 91, both hemispheres 53.4
2325 Male, age 76, both hemispheres 52.0
Spinal trigeminal nucleus, caudal
nTPM: 59.9
2447 Male, age 76, both hemispheres 68.7
2308 Male, age 80, both hemispheres 63.3
2642 Male, age 74, both hemispheres 58.3
2312 Male, age 61, both hemispheres 55.4
2390 Female, age 91, both hemispheres 53.8
Spinal trigeminal nucleus, interpolar
nTPM: 53.0
2033 Male, age 80, both hemispheres 57.6
2386 Female, age 85, both hemispheres 55.0
2389 Female, age 91, both hemispheres 52.5
2625 Male, age 61, both hemispheres 50.3
2066 Male, age 76, right hemisphere 49.9
Spinal trigeminal nucleus, oral
nTPM: 56.7
1978 Male, age 76, both hemispheres 63.6
2164 Male, age 80, both hemispheres 57.2
2737 Female, age 85, both hemispheres 49.1
Spinal vestibular nucleus
nTPM: 57.0
2780 Male, age 80, both hemispheres 62.0
2186 Female, age 91, both hemispheres 61.8
2384 Male, age 74, both hemispheres 59.2
2748 Male, age 76, both hemispheres 59.1
2796 Male, age 61, both hemispheres 51.0
2806 Female, age 85, both hemispheres 49.0
Subcoeruleus area
nTPM: 49.9
2451 Male, age 74, both hemispheres 60.3
2323 Female, age 91, left hemisphere 55.5
1958 Male, age 80, both hemispheres 45.8
2369 Female, age 85, left hemisphere 45.2
2089 Male, age 76, left hemisphere 42.8
Superior olive
nTPM: 45.7
2020 Male, age 76, both hemispheres 48.8
2561 Female, age 91, both hemispheres 47.7
2329 Male, age 80, right hemisphere 46.1
2364 Male, age 74, right hemisphere 44.1
1875 Female, age 85, both hemispheres 41.8
Superior vestibular nucleus
nTPM: 52.6
2061 Male, age 76, both hemispheres 56.2
2015 Male, age 80, both hemispheres 54.7
2383 Male, age 74, both hemispheres 47.1
Ventral medullary reticular nucleus
nTPM: 59.7
2060 Male, age 76, both hemispheres 64.8
2372 Male, age 61, both hemispheres 54.5
Ventral periolivary nuclei
nTPM: 45.4
2130 Female, age 85, both hemispheres 49.7
2165 Male, age 80, both hemispheres 47.3
2023 Male, age 76, both hemispheres 42.8
2794 Female, age 91, left hemisphere 41.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 55.2
2302 Female, age 91, both hemispheres 61.7
2118 Male, age 80, both hemispheres 54.9
2741 Female, age 85, both hemispheres 54.1
1986 Male, age 76, both hemispheres 53.1
2180 Male, age 61, both hemispheres 52.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 48.6
2456 Female, age 91, both hemispheres 53.9
2359 Male, age 61, both hemispheres 49.7
2161 Male, age 80, both hemispheres 48.7
2840 Female, age 85, both hemispheres 47.3
2449 Male, age 74, both hemispheres 46.3
1959 Male, age 76, both hemispheres 45.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 26.0
FF:10165-103B3 76 years, female 29.5
FF:10182-103D2 60 years, female 22.4
Medulla oblongata
Scaled Tags Per Million: 22.8
FF:10155-103A2 76 years, female 27.6
FF:10038-101F2 18-64 years, mixed 25.0
FF:10174-103C3 60 years, female 15.8
Pons
Scaled Tags Per Million: 20.5
FF:10033-101E6 18-54 years, mixed 20.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 57.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 52.6
Samples: 4

Max nTPM: 57.4
Min nTPM: 48.1
Sample A Female 49.9
Sample B Female 54.8
Sample C Male 57.4
Sample D Male 48.1
Pons
nTPM: 57.3
Samples: 4

Max nTPM: 66.6
Min nTPM: 51.3
Sample A Female 66.6
Sample B Female 55.6
Sample C Male 55.7
Sample D Male 51.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 96.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 96.7
Samples: 4

Max nTPM: 100.2
Min nTPM: 93.5
Sample A Male 99.3
Sample B Male 100.2
Sample C Female 93.5
Sample D Female 93.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.6
75988255 Antisense, RP_060606_02_E05, Mouse strain C57BL/6J (56 days, male) 7.6
Pons
Expression energy: 7.3
75988255 Antisense, RP_060606_02_E05, Mouse strain C57BL/6J (56 days, male) 7.3

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