HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:92.3 nTPM
HPA Brain:57.8 nTPM
GTEx:92.3 nTPM
FANTOM5:100.9 Scaled Tags Per Million
Pig:87.3 nTPM
Mouse:272.3 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023312
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 57.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.9
1898 Male, age 80, left hemisphere 66.9
2529 Female, age 94, left hemisphere 51.8
2621 Female, age 67, right hemisphere 50.8
1855 Male, age 76, left hemisphere 48.4
2148 Female, age 91, left hemisphere 47.0
1911 Female, age 85, right hemisphere 46.6
Dentate gyrus
nTPM: 52.5
2010 Male, age 76, both hemispheres 58.9
2530 Female, age 94, left hemisphere 58.5
1927 Female, age 91, both hemispheres 56.0
2528 Male, age 74, both hemispheres 50.1
2246 Female, age 85, both hemispheres 49.9
2531 Female, age 67, both hemispheres 41.8
Entorhinal gyrus
nTPM: 49.8
2764 Male, age 80, right hemisphere 63.6
2117 Female, age 91, right hemisphere 56.0
1938 Female, age 85, left hemisphere 53.7
1787 Male, age 76, left hemisphere 52.5
2613 Female, age 94, left hemisphere 37.7
2686 Male, age 75, right hemisphere 35.1
Hippocampus, CA1
nTPM: 55.8
2749 Male, age 80, left hemisphere 80.8
1873 Female, age 85, both hemispheres 52.2
2527 Male, age 74, both hemispheres 50.6
2045 Male, age 76, both hemispheres 50.2
2082 Female, age 91, right hemisphere 45.2
Hippocampus, CA2
nTPM: 57.8
1963 Male, age 80, left hemisphere 70.9
1892 Male, age 76, both hemispheres 66.3
2249 Male, age 74, both hemispheres 62.2
1940 Female, age 85, left hemisphere 52.5
2437 Female, age 94, left hemisphere 49.0
2113 Female, age 91, right hemisphere 45.9
Hippocampus, CA3
nTPM: 53.5
1867 Male, age 76, both hemispheres 60.7
2137 Male, age 80, left hemisphere 58.9
2436 Male, age 74, both hemispheres 57.4
2620 Female, age 94, left hemisphere 52.3
1891 Female, age 85, both hemispheres 50.3
2861 Female, age 67, both hemispheres 41.4
Parahippocampal cortex
nTPM: 48.1
1850 Male, age 80, both hemispheres 60.2
1990 Female, age 91, right hemisphere 57.5
1933 Female, age 85, both hemispheres 52.5
2250 Female, age 67, right hemisphere 52.5
2532 Female, age 72, left hemisphere 51.7
2018 Male, age 76, both hemispheres 50.4
2245 Female, age 91, both hemispheres 49.9
2692 Male, age 74, both hemispheres 40.5
2693 Female, age 94, both hemispheres 35.8
2622 Female, age 67, right hemisphere 30.2
Perirhinal gyrus
nTPM: 57.4
1794 Male, age 80, right hemisphere 69.2
1847 Female, age 91, left hemisphere 67.5
1841 Female, age 85, right hemisphere 56.8
2521 Female, age 94, right hemisphere 48.4
2848 Male, age 76, right hemisphere 44.9
Subiculum
nTPM: 51.1
1977 Female, age 85, both hemispheres 59.8
1901 Male, age 80, both hemispheres 58.4
2619 Male, age 74, both hemispheres 48.6
2042 Male, age 76, both hemispheres 48.1
2438 Female, age 94, left hemisphere 45.8
2729 Female, age 91, right hemisphere 45.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 92.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.3
Samples: 197

Max nTPM: 210.3
Min nTPM: 47.1
Std nTPM: 20.5
Median nTPM: 89.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 210.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 157.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 149.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 147.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 146.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 146.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 130.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 130.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 128.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 128.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 126.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 100.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.9
FF:10169-103B7 60 years, female 118.3
FF:10153-102I9 76 years, female 83.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 87.3
Pig sample Sample description nTPM
Subiculum
nTPM: 72.6
Samples: 4

Max nTPM: 96.6
Min nTPM: 59.8
Sample A Female 96.6
Sample B Female 70.8
Sample C Male 63.0
Sample D Male 59.8
Dorsal hippocampus
nTPM: 87.3
Samples: 4

Max nTPM: 113.7
Min nTPM: 63.0
Sample A Female 113.7
Sample B Female 83.9
Sample C Male 88.7
Sample D Male 63.0
Entorhinal cortex
nTPM: 69.0
Samples: 4

Max nTPM: 83.9
Min nTPM: 52.1
Sample A Female 75.4
Sample B Female 83.9
Sample C Male 64.7
Sample D Male 52.1
Ventral hippocampus
nTPM: 77.3
Samples: 4

Max nTPM: 86.5
Min nTPM: 59.4
Sample A Female 84.3
Sample B Female 59.4
Sample C Male 86.5
Sample D Male 79.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 272.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 244.2
Samples: 4

Max nTPM: 262.2
Min nTPM: 227.2
Sample A Male 227.2
Sample B Male 242.7
Sample C Female 262.2
Sample D Female 244.6
Hippocampal formation
nTPM: 272.4
Samples: 4

Max nTPM: 290.2
Min nTPM: 244.1
Sample A Male 290.2
Sample B Male 244.1
Sample C Female 268.9
Sample D Female 286.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
69080020 Antisense, RP_050324_01_D10, Mouse strain C57BL/6J (56 days, male) 5.3

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