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RPS11
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  • RPS11
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS11 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3941.2
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3661.7
Number of samples 497
Samples
Sample Description pTPM
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 13244.2
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 12168.3
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 10543.1
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 8860.6
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 8587.5
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 8416.4
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 8338.0
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 7952.7
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 7755.8
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 7611.4
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 7509.7
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 7506.0
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 7431.3
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 7410.9
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 7111.2
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 7095.3
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 7073.4
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 6997.3
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 6901.2
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 6869.0
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 6835.0
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 6829.4
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 6797.2
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 6690.8
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 6689.1
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 6687.2
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 6549.6
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 6487.2
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 6441.2
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 6021.9
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 5998.1
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 5912.6
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 5861.0
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 5787.8
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 5719.6
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 5713.6
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 5697.9
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 5608.4
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 5594.1
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 5581.9
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 5556.6
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 5537.0
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 5514.6
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 5506.9
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 5412.0
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 5399.9
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 5390.5
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 5378.7
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 5347.6
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 5304.5
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 5249.6
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 5247.6
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 5247.0
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 5229.4
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 5204.7
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 5201.4
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 5183.0
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 5171.1
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 5157.0
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 5147.5
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 5143.5
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 5128.0
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 5124.6
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 5122.6
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 5106.1
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 5081.9
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 5081.3
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 5056.0
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 5043.9
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 5026.6
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 5014.6
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 5006.0
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 5001.3
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 4999.4
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 4986.6
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 4969.5
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 4963.4
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 4952.2
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 4951.2
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 4940.2
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 4929.1
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 4924.6
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 4918.9
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 4897.9
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 4897.4
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 4842.8
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 4836.3
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 4815.8
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 4813.9
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 4806.8
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 4793.1
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 4766.5
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 4759.9
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 4733.7
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 4733.1
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 4675.4
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 4666.0
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 4662.5
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 4655.6
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 4625.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 4572.3
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 4559.5
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 4521.5
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 4501.7
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 4469.4
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 4460.6
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 4450.5
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 4445.3
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 4441.3
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 4438.4
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 4432.4
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 4419.6
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 4414.7
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 4410.8
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 4394.2
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 4387.6
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 4382.7
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 4371.9
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 4356.4
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 4341.3
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 4319.2
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 4313.8
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 4310.4
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 4304.1
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 4299.2
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 4291.1
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 4286.7
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 4281.7
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 4275.8
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 4273.6
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 4261.2
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 4260.8
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 4235.6
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 4216.3
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 4214.1
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 4203.5
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 4199.7
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 4191.8
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 4187.7
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 4180.8
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 4179.6
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 4173.0
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 4168.9
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 4161.7
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 4160.8
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 4137.1
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 4110.2
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 4097.9
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 4087.7
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 4077.9
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 4072.3
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 4067.4
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 4065.8
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 4064.8
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 4063.4
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 4047.3
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 4044.6
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 4035.6
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 4029.5
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 4012.8
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 4005.4
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 3967.9
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 3947.3
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 3935.2
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 3930.3
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 3923.1
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 3921.2
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 3911.4
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 3904.3
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 3901.6
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 3888.1
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 3887.4
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 3885.1
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 3883.2
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 3882.8
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 3880.3
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 3874.3
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 3873.3
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 3868.0
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 3867.6
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 3859.8
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 3843.2
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 3828.0
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 3810.6
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 3804.5
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 3798.4
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 3795.3
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 3786.4
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 3786.4
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 3762.9
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 3751.4
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 3750.5
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 3742.9
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 3727.4
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 3718.8
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 3714.2
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 3703.2
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 3701.8
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 3700.7
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 3686.2
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 3676.1
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 3652.8
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 3645.0
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 3621.2
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 3611.4
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 3598.7
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 3596.3
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 3582.8
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 3558.7
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 3535.7
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 3521.5
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 3519.6
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 3508.0
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 3507.8
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 3507.6
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 3504.2
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 3493.4
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 3490.9
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 3490.9
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 3489.4
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 3487.3
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 3486.6
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 3486.0
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 3484.6
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 3476.9
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 3472.4
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 3471.7
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 3471.4
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 3462.4
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 3458.5
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 3427.8
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 3425.2
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 3425.0
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 3422.9
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 3420.8
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 3417.2
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 3402.9
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 3398.4
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 3385.6
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 3383.5
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 3373.4
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 3366.8
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 3361.7
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 3361.0
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 3357.9
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 3349.8
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 3338.5
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 3326.5
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 3315.3
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 3314.9
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 3313.7
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 3312.2
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 3300.3
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 3299.7
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 3299.0
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 3297.4
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 3289.8
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 3288.3
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 3276.7
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 3275.6
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 3272.7
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 3258.7
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 3245.5
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 3238.5
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 3223.9
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 3222.3
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 3218.9
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 3204.4
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 3203.8
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 3200.3
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 3195.1
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 3190.7
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 3186.0
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 3178.6
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 3175.5
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 3165.4
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 3157.6
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 3153.1
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 3149.9
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 3140.2
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 3133.6
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 3128.3
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 3114.6
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 3114.2
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 3113.8
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 3109.9
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 3104.1
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 3098.9
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 3097.9
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 3097.6
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 3083.0
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 3079.5
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 3079.0
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 3077.0
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 3076.3
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 3074.6
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 3072.4
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 3071.3
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 3049.8
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 3047.5
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 3044.5
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 3035.9
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 3026.4
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 3023.5
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 3022.9
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 3017.9
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 3007.5
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 3007.1
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 3004.1
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 3003.6
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 3002.0
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 3000.7
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 2982.2
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 2972.8
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 2970.4
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 2969.4
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 2968.7
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 2964.7
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 2958.6
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 2952.1
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 2937.7
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 2932.4
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 2931.4
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 2931.3
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 2921.6
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 2920.5
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 2917.6
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 2917.5
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 2902.4
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 2899.1
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 2898.1
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 2894.8
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 2874.1
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 2865.1
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 2863.2
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 2858.8
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 2849.6
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 2845.3
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 2844.9
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 2841.7
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 2837.0
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 2831.8
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 2829.6
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 2827.5
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 2819.3
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 2808.0
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 2793.2
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 2790.5
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 2788.7
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 2779.3
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 2775.3
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 2767.7
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 2760.9
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 2760.6
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 2759.4
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 2757.0
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 2736.8
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 2735.2
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 2734.2
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 2732.8
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 2724.9
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 2721.9
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 2720.7
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 2720.5
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 2718.7
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 2714.9
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 2708.5
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 2705.2
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 2704.9
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 2702.7
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 2700.4
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 2695.1
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 2690.6
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 2688.7
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 2678.5
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 2676.8
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 2670.5
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 2669.2
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 2668.0
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 2659.1
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 2635.7
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 2618.1
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 2605.4
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 2604.8
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 2602.3
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 2593.8
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 2582.2
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 2580.5
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 2574.0
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 2572.3
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 2555.9
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 2547.5
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 2539.7
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 2530.8
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 2530.4
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 2528.1
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 2524.2
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 2514.4
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 2500.7
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 2500.5
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 2493.3
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 2493.1
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 2490.6
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 2486.9
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 2480.2
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 2475.8
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 2474.6
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 2471.8
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 2468.4
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 2462.0
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 2454.6
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 2437.3
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 2435.2
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 2425.9
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 2419.9
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 2419.2
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 2393.7
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 2388.3
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 2373.9
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 2370.6
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 2360.3
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 2359.8
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 2354.7
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 2348.0
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 2347.5
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 2347.4
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 2344.6
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 2329.2
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 2322.5
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 2320.9
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 2293.9
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 2290.1
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 2281.2
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 2276.0
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 2270.5
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 2252.5
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 2230.0
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 2228.4
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 2224.7
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 2221.3
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 2208.8
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 2204.0
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 2203.9
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 2203.0
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 2201.2
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 2193.7
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 2188.6
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 2178.6
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 2175.8
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 2169.1
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 2168.4
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 2166.9
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 2166.1
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 2164.5
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 2154.8
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 2149.8
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 2143.6
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 2134.5
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 2118.9
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 2112.6
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 2108.2
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 2100.5
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 2083.7
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 2081.1
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 2080.4
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 2071.1
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 2067.5
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 2062.1
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 2055.4
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 2055.3
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 2050.7
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 2032.8
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 2031.6
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 2013.8
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 1998.7
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 1975.7
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 1965.9
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 1933.5
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 1922.6
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 1895.0
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 1888.9
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 1882.1
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 1833.9
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 1821.6
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 1815.1
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 1806.2
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 1804.0
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 1800.6
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 1763.2
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 1753.8
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 1737.6
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 1733.4
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 1656.8
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 1609.3
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1541.1
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 1504.1
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 1369.3
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS11 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4252.28
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3692.4
Number of samples 105
Samples
Sample Description pTPM
L662 66 years, male, stage:Stage IA, dead, 865 days 10094.6
L842 62 years, female, stage:Stage IB, alive, 2005 days 7097.1
L551 62 years, male, stage:Stage IA, alive, 2924 days 6834.1
L731 59 years, female, stage:Stage IA, dead, 964 days 6386.2
L683 77 years, female, stage:Stage IIA, dead, 612 days 6221.3
L851 70 years, male, stage:Stage IB, dead, 1315 days 5960.7
L473 66 years, female, stage:Stage IA, alive, 3021 days 5748.8
L773 64 years, female, stage:Stage IV, dead, 311 days 5641.6
L829 76 years, male, stage:Stage IA, alive, 2173 days 5640.6
L616 54 years, male, stage:Stage IA, dead, 410 days 5411.6
L446 71 years, female, stage:Stage IIB, dead, 415 days 4972.8
L703 71 years, male, stage:Stage IIA, dead, 1137 days 4834.4
L530 76 years, female, stage:Stage IIA, dead, 308 days 4821.7
L827 70 years, male, stage:Stage IIB, dead, 1105 days 4708.4
L850 77 years, male, stage:Stage IIIA, dead, 997 days 4705.9
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 4687.6
L689 69 years, male, stage:Stage IA, alive, 1943 days 4680.6
L887 77 years, male, stage:Stage IA, dead, 374 days 4517.8
L682 64 years, female, stage:Stage IIB, dead, 840 days 4468.9
L791 66 years, female, stage:Stage IIIA, dead, 368 days 4419.2
L738 74 years, female, stage:Stage IB, dead, 1314 days 4302.5
L885 62 years, female, stage:Stage IA, alive, 1618 days 4252.3
L605 74 years, female, stage:Stage IA, alive, 2460 days 4209.1
L688 57 years, male, stage:Stage IIIA, dead, 789 days 4128.3
L877 70 years, female, stage:Stage IA, alive, 1599 days 4060.4
L603 70 years, female, stage:Stage IB, dead, 972 days 4046.0
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 4019.8
L810 64 years, female, stage:Stage IIIA, dead, 625 days 3954.0
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 3891.2
L663 62 years, female, stage:Stage IB, alive, 2018 days 3884.1
L865 75 years, female, stage:Stage IIB, alive, 1927 days 3869.9
L656 58 years, male, stage:Stage IA, alive, 2227 days 3866.9
L593 78 years, male, stage:Stage IA, dead, 2436 days 3861.1
L746 64 years, female, stage:Stage IIIA, dead, 594 days 3848.0
L832 65 years, female, stage:Stage IA, alive, 2145 days 3840.0
L599 80 years, male, stage:Stage IB, dead, 2083 days 3834.4
L566 58 years, male, stage:Stage IB, alive, 2489 days 3817.0
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 3783.0
L766 59 years, male, stage:Stage IB, alive, 1793 days 3767.3
L532 69 years, female, stage:Stage IA, dead, 301 days 3737.6
L828 68 years, female, stage:Stage IIB, alive, 2222 days 3703.6
L768 60 years, male, stage:Stage IIIA, dead, 472 days 3695.9
L546 57 years, male, stage:Stage IA, dead, 973 days 3644.1
L695 68 years, female, stage:Stage IB, dead, 1762 days 3624.5
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 3621.4
L826 45 years, female, stage:Stage IV, dead, 935 days 3604.9
L617 68 years, male, stage:Stage IIIA, dead, 238 days 3598.3
L638 65 years, male, stage:Stage IA, alive, 2076 days 3580.6
L607 59 years, male, stage:Stage IB, alive, 2572 days 3527.9
L601 75 years, male, stage:Stage IB, dead, 2068 days 3513.8
L596 74 years, female, stage:Stage IA, alive, 2319 days 3508.6
L439 80 years, male, stage:Stage IIB, dead, 2773 days 3491.3
L585 70 years, female, stage:Stage IIA, dead, 402 days 3449.6
L630 65 years, female, stage:Stage IA, dead, 1733 days 3432.7
L484 64 years, female, stage:Stage IA, alive, 2895 days 3408.1
L710 72 years, female, stage:Stage IIA, alive, 1775 days 3397.6
L569 76 years, female, stage:Stage IA, alive, 2531 days 3383.0
L808 48 years, female, stage:Stage IA, alive, 3001 days 3365.0
L541 70 years, female, stage:Stage IIIA, dead, 915 days 3344.1
L545 60 years, female, stage:Stage IA, alive, 2874 days 3342.7
L871 74 years, male, stage:Stage IB, dead, 873 days 3332.8
L831 62 years, female, stage:Stage IB, alive, 2152 days 3324.4
L561 62 years, female, stage:Stage IA, alive, 2543 days 3277.0
L613 72 years, male, stage:Stage IIIA, dead, 19 days 3244.7
L673 74 years, female, stage:Stage IA, dead, 568 days 3237.8
L557 81 years, female, stage:Stage IB, alive, 2580 days 3185.2
L462 67 years, male, stage:Stage IIIA, dead, 568 days 3157.3
L400 78 years, male, stage:Stage IIA, dead, 1233 days 3115.8
L872 71 years, female, stage:Stage IA, alive, 1793 days 3097.0
L543 65 years, male, stage:Stage IA, alive, 2711 days 3088.2
L458 76 years, female, stage:Stage IA, dead, 223 days 3049.0
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 3044.6
L531 74 years, male, stage:Stage IB, dead, 928 days 3033.0
L875 69 years, female, stage:Stage IA, alive, 1675 days 3009.0
L606 55 years, male, stage:Stage IA, alive, 2336 days 3006.4
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 3001.8
L802 62 years, female, stage:Stage IA, dead, 773 days 2996.1
L800 66 years, female, stage:Stage IA, dead, 2417 days 2993.1
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 2986.6
L678 65 years, female, stage:Stage IB, dead, 1114 days 2982.2
L493 56 years, female, stage:Stage IIB, alive, 2945 days 2943.1
L620 70 years, female, stage:Stage IIIA, dead, 338 days 2932.7
L778 65 years, female, stage:Stage IA, alive, 1600 days 2908.4
L873 62 years, female, stage:Stage IA, alive, 1740 days 2907.1
L879 75 years, male, stage:Stage IV, dead, 873 days 2890.8
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 2886.5
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 2830.7
L565 59 years, female, stage:Stage IB, dead, 543 days 2782.5
L890 56 years, female, stage:Stage IIB, dead, 1264 days 2672.1
L440 80 years, male, stage:Stage IIB, dead, 651 days 2669.1
L626 76 years, female, stage:Stage IA, dead, 1994 days 2663.6
L504 65 years, female, stage:Stage IA, dead, 1295 days 2648.8
L749 49 years, female, stage:Stage IIIA, dead, 189 days 2646.9
L867 62 years, female, stage:Stage IIIA, dead, 317 days 2634.5
L413 72 years, female, stage:Stage IIIA, dead, 313 days 2574.0
L735 75 years, female, stage:Stage IA, alive, 1830 days 2573.0
L728 77 years, male, stage:Stage IIB, dead, 1128 days 2539.3
L725 64 years, female, stage:Stage IA, alive, 1830 days 2531.9
L782 73 years, female, stage:Stage IIB, alive, 3371 days 2436.7
L404 74 years, female, stage:Stage IIA, dead, 2318 days 2400.0
L880 75 years, female, stage:Stage IA, alive, 1767 days 2302.3
L838 71 years, female, stage:Stage IA, dead, 1005 days 2247.5
L455 52 years, female, stage:Stage IA, alive, 3315 days 2236.9
L602 69 years, female, stage:Stage IA, alive, 2277 days 1960.3
L816 73 years, female, stage:Stage IIA, dead, 353 days 1658.0
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS11 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3969.96
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3815.9
Number of samples 489
Samples
Sample Description pTPM
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 10719.6
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 10579.4
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 8456.5
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 8454.7
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 8213.7
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 8061.9
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 7869.8
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 7649.1
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 7549.3
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 7393.2
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 7378.6
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 7335.3
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 7332.0
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 7318.1
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 7155.8
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 7131.1
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 7099.4
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 7058.0
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 6887.1
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 6850.7
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 6837.5
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 6809.6
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 6732.2
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 6623.7
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 6612.6
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 6582.9
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 6542.6
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 6499.5
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 6495.4
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 6415.2
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 6373.2
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 6373.0
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 6353.9
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 6351.6
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 6322.2
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 6282.9
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 6274.1
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 6097.4
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 6080.1
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 6049.5
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 6046.2
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 6025.4
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 6005.5
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 6004.6
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 6003.0
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 5993.5
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 5963.1
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 5928.9
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 5868.7
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 5866.9
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 5831.0
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 5823.5
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 5721.8
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 5712.5
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 5695.8
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 5694.7
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 5662.9
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 5660.6
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 5605.0
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 5602.1
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 5576.6
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 5541.3
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 5519.9
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 5489.1
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 5455.6
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 5429.1
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 5421.2
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 5383.5
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 5376.4
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 5370.2
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 5368.5
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 5304.8
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 5275.0
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 5259.3
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 5226.9
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 5219.5
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 5186.3
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 5171.5
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 5148.4
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 5143.9
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 5137.7
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 5106.5
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 5082.6
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 5068.8
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 4947.2
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 4938.8
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 4934.6
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 4923.4
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 4914.8
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 4913.3
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 4875.6
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 4861.0
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 4847.6
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 4840.2
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 4831.9
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 4830.6
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 4778.6
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 4750.4
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 4737.7
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 4736.9
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 4724.2
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 4718.9
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 4699.2
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 4695.4
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 4685.4
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 4680.7
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 4679.4
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 4667.7
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 4637.9
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 4634.9
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 4629.8
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 4620.4
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 4604.2
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 4580.3
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 4568.2
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 4554.8
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 4551.4
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 4467.1
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 4465.4
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 4463.6
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 4456.7
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 4451.9
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 4436.3
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 4432.2
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 4423.1
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 4406.5
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 4405.7
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 4399.0
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 4392.9
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 4376.3
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 4352.8
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 4352.3
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 4350.3
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 4346.7
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 4328.0
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 4314.5
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 4310.7
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 4298.4
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 4296.0
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 4279.5
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 4274.0
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 4273.5
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 4271.6
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 4263.9
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 4258.1
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 4257.7
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 4246.0
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 4243.7
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 4235.3
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 4233.6
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 4229.7
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 4214.0
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 4206.2
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 4202.6
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 4189.0
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 4187.3
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 4186.3
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 4185.6
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 4175.5
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 4165.9
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 4156.7
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 4147.9
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 4144.5
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 4108.9
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 4107.6
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 4091.2
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 4087.1
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 4085.7
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 4084.4
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 4084.3
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 4081.2
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 4064.2
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 4061.0
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 4060.2
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 4051.0
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 4046.0
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 4041.2
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 4017.1
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 4008.1
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 4001.9
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 4001.0
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 3998.9
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 3986.0
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 3976.4
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 3971.1
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 3968.9
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 3964.8
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 3963.4
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 3928.9
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 3926.9
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 3924.2
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 3922.3
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 3899.5
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 3898.3
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 3894.3
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 3891.7
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 3886.2
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 3880.3
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 3873.8
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 3872.8
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 3871.7
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 3842.0
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 3841.1
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 3829.3
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 3824.3
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 3814.7
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 3808.0
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 3798.0
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 3796.4
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 3793.0
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 3792.5
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 3788.3
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 3772.9
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 3763.3
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 3750.7
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 3731.5
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 3730.9
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 3724.8
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 3720.1
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 3719.1
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 3718.7
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 3707.3
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 3672.3
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 3660.7
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 3658.2
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 3652.9
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 3652.0
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 3645.9
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 3644.0
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 3631.0
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 3625.3
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 3622.8
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 3619.8
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 3602.7
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 3596.2
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 3583.2
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 3554.2
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 3547.4
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 3543.7
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 3539.0
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 3528.6
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 3528.6
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 3521.8
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 3520.8
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 3520.2
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 3519.8
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 3512.1
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 3511.5
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 3507.7
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 3507.4
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 3498.8
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 3497.2
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 3494.5
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 3489.8
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 3488.2
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 3481.7
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 3478.6
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 3478.1
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 3469.6
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 3468.3
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 3460.7
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 3443.1
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 3427.6
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 3419.2
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 3411.9
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 3410.1
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 3405.9
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 3405.1
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 3387.9
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3387.5
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 3374.4
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 3363.0
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 3356.2
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 3352.8
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 3343.9
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 3343.3
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 3338.0
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 3332.4
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 3332.0
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 3330.5
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 3322.3
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 3298.4
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 3297.6
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 3297.1
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 3289.4
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 3272.1
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 3271.9
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 3255.1
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 3252.2
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 3247.9
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 3243.3
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 3242.2
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 3240.5
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 3228.9
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 3222.8
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 3210.1
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 3208.9
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 3204.2
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 3183.0
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 3182.4
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 3178.7
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 3177.7
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 3177.4
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 3169.2
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 3162.7
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 3155.7
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 3153.8
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 3144.5
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 3133.6
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 3131.7
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 3131.0
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 3127.1
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 3126.6
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 3117.8
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 3110.9
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 3110.4
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 3105.5
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 3100.3
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 3099.5
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 3085.3
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 3072.0
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 3060.7
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 3060.3
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 3059.8
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 3053.9
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 3045.7
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 3045.5
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 3036.4
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 3025.7
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 3025.7
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 3013.5
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 3010.0
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 2997.0
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 2994.4
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 2990.1
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 2984.9
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 2980.5
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 2974.6
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 2973.0
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 2959.9
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 2955.5
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 2954.2
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 2952.6
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 2951.9
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 2921.7
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 2920.8
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 2909.0
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 2906.9
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 2906.6
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 2899.0
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 2889.3
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 2881.2
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2876.5
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 2867.4
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 2863.5
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 2863.2
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 2859.1
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 2854.4
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 2830.6
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 2829.9
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 2811.8
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 2806.6
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 2803.6
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 2798.1
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 2795.1
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 2780.4
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 2780.0
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 2768.2
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 2763.4
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 2760.2
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 2740.5
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 2739.5
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 2737.3
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 2732.6
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 2728.4
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 2726.1
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 2723.2
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 2716.8
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 2708.2
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 2707.8
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 2685.6
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 2685.2
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 2684.7
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 2680.7
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 2664.0
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 2651.7
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 2651.1
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 2643.7
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 2637.0
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 2635.1
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 2627.6
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 2626.0
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 2624.6
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 2623.4
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 2606.4
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 2574.3
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 2554.2
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 2538.4
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 2532.4
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 2528.5
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 2513.9
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 2512.7
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 2508.8
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 2506.4
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 2505.6
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 2496.5
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 2489.9
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 2483.5
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 2479.9
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 2467.2
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 2463.7
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 2461.2
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 2459.6
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 2445.1
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 2431.7
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 2429.6
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 2423.5
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 2421.5
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 2418.8
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 2412.9
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 2401.4
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 2400.7
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 2397.2
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 2396.7
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 2392.6
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 2389.3
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 2387.6
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 2383.9
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 2366.0
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 2363.3
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 2360.8
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 2356.4
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 2347.8
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 2337.9
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 2323.8
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 2316.3
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 2308.6
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 2301.6
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 2299.9
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 2298.4
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 2290.7
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 2284.1
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 2271.5
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 2266.8
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 2252.1
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 2251.9
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 2248.8
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 2222.9
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 2207.0
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 2203.8
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 2203.4
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 2199.8
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 2194.7
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 2189.9
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 2183.5
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 2151.8
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 2144.2
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 2143.6
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 2138.6
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 2127.2
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 2105.7
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 2076.1
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 2063.9
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 2040.5
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 2013.6
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 1996.5
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 1988.7
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 1987.9
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 1985.2
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 1977.2
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 1954.9
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 1949.7
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 1942.8
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 1933.7
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 1917.9
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 1904.0
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 1894.9
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 1874.7
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 1867.3
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 1845.8
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 1806.8
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 1800.9
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 1800.5
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 1791.8
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 1708.4
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 1682.8
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 1658.0
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 1630.5
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 1563.8
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS11 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3997.59
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3579.6
Number of samples 68
Samples
Sample Description pTPM
L857 69 years, male, stage:Stage IB, dead, 226 days 7305.4
L568 77 years, female, stage:Stage IIB, dead, 71 days 5939.7
L650 69 years, female, stage:Stage IB, dead, 986 days 5566.1
L447 67 years, male, stage:Stage IIB, alive, 3203 days 5265.4
L860 77 years, male, stage:Stage IA, alive, 2056 days 5222.2
L852 64 years, male, stage:Stage IB, dead, 700 days 5202.8
L559 72 years, male, stage:Stage IIB, alive, 2615 days 5153.9
L818 67 years, male, stage:Stage IB, alive, 2480 days 4932.5
L459 75 years, male, stage:Stage IIA, alive, 3181 days 4905.9
L457 46 years, female, stage:Stage IIA, alive, 2901 days 4768.4
L466 65 years, female, stage:Stage IIIA, dead, 412 days 4700.0
L539 78 years, male, stage:Stage IB, dead, 370 days 4657.2
L854 62 years, female, stage:Stage IB, alive, 2256 days 4571.7
L604 67 years, male, stage:Stage IIA, dead, 286 days 4538.4
L739 49 years, female, stage:Stage IIIA, dead, 352 days 4482.3
L644 67 years, male, stage:Stage IA, dead, 282 days 4394.9
L856 69 years, male, stage:Stage IA, dead, 1465 days 4361.3
L744 75 years, male, stage:Stage IA, alive, 1614 days 4322.3
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 4170.2
L661 66 years, male, stage:Stage IA, dead, 1123 days 4156.6
L820 73 years, female, stage:Stage IA, alive, 2405 days 4048.7
L715 69 years, female, stage:Stage IIIA, dead, 150 days 4026.7
L881 70 years, male, stage:Stage IB, alive, 1752 days 4019.3
L824 70 years, male, stage:Stage IA, dead, 665 days 3999.4
L608 73 years, male, stage:Stage IA, alive, 2350 days 3995.7
L592 61 years, male, stage:Stage IB, alive, 2368 days 3982.2
L444 74 years, female, stage:Stage IIB, alive, 3337 days 3856.3
L488 61 years, female, stage:Stage IIA, alive, 2993 days 3851.7
L483 65 years, male, stage:Stage IB, dead, 77 days 3652.4
L642 67 years, male, stage:Stage IB, dead, 1167 days 3602.7
L420 57 years, female, stage:Stage IIB, dead, 295 days 3580.6
L468 53 years, male, stage:Stage IB, alive, 3004 days 3574.5
L633 77 years, female, stage:Stage IA, alive, 2102 days 3516.5
L490 58 years, male, stage:Stage IA, dead, 716 days 3385.2
L723 67 years, male, stage:Stage IIA, dead, 433 days 3371.1
L788 54 years, female, stage:Stage IA, alive, 3385 days 3336.9
L755 82 years, male, stage:Stage IIA, dead, 227 days 3336.8
L456 48 years, male, stage:Stage IIA, dead, 1660 days 3312.4
L658 65 years, female, stage:Stage IIB, alive, 2083 days 3247.2
L470 78 years, female, stage:Stage IB, dead, 1774 days 3219.8
L496 77 years, male, stage:Stage IB, alive, 2761 days 3214.3
L767 67 years, male, stage:Stage IA, alive, 1718 days 3110.7
L753 61 years, male, stage:Stage IIA, alive, 1705 days 3027.6
L858 69 years, female, stage:Stage IIB, dead, 558 days 3015.1
L655 62 years, male, stage:Stage IIA, dead, 1603 days 3009.2
L406 64 years, male, stage:Stage IA, alive, 3057 days 2983.5
L736 67 years, male, stage:Stage IA, dead, 1195 days 2949.6
L534 66 years, male, stage:Stage IIA, alive, 2693 days 2912.2
L529 79 years, female, stage:Stage IA, alive, 2775 days 2904.2
L712 61 years, male, stage:Stage IA, alive, 1698 days 2850.3
L756 72 years, male, stage:Stage IB, alive, 1796 days 2759.7
L464 66 years, male, stage:Stage IB, dead, 1935 days 2695.1
L886 71 years, male, stage:Stage IB, dead, 1932 days 2648.9
L652 82 years, male, stage:Stage IA, dead, 5 days 2644.2
L563 61 years, female, stage:Stage IIB, dead, 1216 days 2639.7
L442 75 years, female, stage:Stage IB, dead, 2433 days 2532.7
L747 74 years, female, stage:Stage IA, dead, 1112 days 2402.2
L719 63 years, male, stage:Stage IB, alive, 1615 days 2391.5
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 2368.4
L586 67 years, male, stage:Stage IIA, dead, 784 days 2312.5
L472 71 years, male, stage:Stage IB, dead, 423 days 2310.9
L685 71 years, female, stage:Stage IIB, alive, 1944 days 2193.5
L760 80 years, male, stage:Stage IIA, alive, 1895 days 2177.3
L864 66 years, female, stage:Stage IA, alive, 2192 days 2090.1
L758 84 years, male, stage:Stage IA, dead, 1562 days 2075.8
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 2048.9
L884 71 years, male, stage:Stage IIA, alive, 1627 days 1886.1
L572 58 years, male, stage:Stage IA, alive, 2532 days 1731.3
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0068800003 Tumor 0.8
CPT0067450003 Tumor 0.8
CPT0147080004 Tumor 0.6
CPT0118340003 Tumor 0.6
CPT0092530003 Tumor 0.5
CPT0106110003 Tumor 0.5
CPT0063810003 Tumor 0.5
CPT0001800013 Tumor 0.5
CPT0105060003 Tumor 0.5
CPT0000920017 Tumor 0.5
CPT0118620003 Tumor 0.5
CPT0113210003 Tumor 0.5
CPT0089340003 Tumor 0.5
CPT0014860003 Tumor 0.5
CPT0105230003 Tumor 0.4
CPT0070060003 Tumor 0.4
CPT0001660013 Tumor 0.4
CPT0067250003 Tumor 0.4
CPT0090170004 Tumor 0.4
CPT0008450003 Tumor 0.4
CPT0147980004 Tumor 0.4
CPT0118810003 Tumor 0.4
CPT0148180004 Tumor 0.4
CPT0067940003 Tumor 0.4
CPT0105270003 Tumor 0.4
CPT0090860003 Tumor 0.4
CPT0114840003 Tumor 0.4
CPT0097580003 Tumor 0.3
CPT0067070003 Tumor 0.3
CPT0092240003 Tumor 0.3
CPT0147880004 Tumor 0.3
CPT0105940003 Tumor 0.3
CPT0091860003 Tumor 0.3
CPT0104750003 Tumor 0.3
CPT0083780003 Tumor 0.3
CPT0105510003 Tumor 0.3
CPT0001580009 Tumor 0.3
CPT0001960003 Tumor 0.3
CPT0114660004 Tumor 0.3
CPT0084140003 Tumor 0.3
CPT0112060003 Tumor 0.3
CPT0146980004 Tumor 0.3
CPT0105600003 Tumor 0.3
CPT0001060010 Tumor 0.3
CPT0011710004 Tumor 0.3
CPT0105630003 Tumor 0.3
CPT0105710003 Tumor 0.3
CPT0105330003 Tumor 0.3
CPT0069360003 Tumor 0.2
CPT0118200003 Tumor 0.2
CPT0102450003 Tumor 0.2
CPT0091240003 Tumor 0.2
CPT0008410003 Tumor 0.2
CPT0066780003 Tumor 0.2
CPT0117970003 Tumor 0.2
CPT0092930003 Tumor 0.2
CPT0086750003 Tumor 0.2
CPT0068100003 Tumor 0.2
CPT0083100003 Tumor 0.2
CPT0125810003 Tumor 0.2
CPT0051690004 Tumor 0.2
CPT0109680004 Tumor 0.2
CPT0098130003 Tumor 0.2
CPT0013600003 Tumor 0.2
CPT0015410003 Tumor 0.2
CPT0104630003 Tumor 0.2
CPT0109740004 Tumor 0.2
CPT0110980004 Tumor 0.1
CPT0082890003 Normal 0.1
CPT0147380004 Tumor 0.1
CPT0014260003 Tumor 0.1
CPT0069520003 Tumor 0.1
CPT0118160003 Tumor 0.1
CPT0069700003 Tumor 0.1
CPT0090340003 Tumor 0.1
CPT0053040004 Tumor 0.1
CPT0109850003 Normal 0.1
CPT0023310003 Tumor 0.1
CPT0011750003 Normal 0.1
CPT0110860004 Tumor 0.1
CPT0052940004 Tumor 0.1
CPT0147480004 Tumor 0.1
CPT0082850004 Tumor 0.1
CPT0104970003 Tumor 0.1
CPT0104650003 Normal 0.1
CPT0147600003 Normal 0.0
CPT0113990003 Tumor 0.0
CPT0084170003 Normal 0.0
CPT0147100003 Normal 0.0
CPT0052170004 Tumor 0.0
CPT0147900003 Normal 0.0
CPT0000930003 Normal 0.0
CPT0146700003 Normal 0.0
CPT0079830003 Tumor 0.0
CPT0055100004 Tumor 0.0
CPT0090700003 Tumor 0.0
CPT0109720004 Tumor 0.0
CPT0001070003 Normal 0.0
CPT0092250003 Normal 0.0
CPT0086320003 Normal 0.0
CPT0063750003 Normal 0.0
CPT0115070003 Tumor 0.0
CPT0091870003 Normal 0.0
CPT0067620003 Tumor 0.0
CPT0148300003 Normal 0.0
CPT0082740004 Tumor 0.0
CPT0090570004 Tumor 0.0
CPT0118570003 Tumor 0.0
CPT0147500003 Normal -0.1
CPT0146780004 Tumor -0.1
CPT0148100003 Normal -0.1
CPT0111300003 Tumor -0.1
CPT0001590003 Normal -0.1
CPT0001380003 Tumor -0.1
CPT0148200003 Normal -0.1
CPT0109760003 Normal -0.1
CPT0063840003 Normal -0.1
CPT0146880004 Tumor -0.1
CPT0109710003 Normal -0.1
CPT0083390004 Tumor -0.1
CPT0105740003 Normal -0.1
CPT0069550003 Normal -0.1
CPT0068610003 Tumor -0.1
CPT0013630003 Normal -0.1
CPT0066890003 Tumor -0.1
CPT0013880003 Tumor -0.1
CPT0063730003 Tumor -0.1
CPT0102480003 Normal -0.1
CPT0086770003 Normal -0.1
CPT0113220003 Normal -0.1
CPT0083140003 Normal -0.1
CPT0118830003 Normal -0.1
CPT0105190003 Normal -0.1
CPT0104760003 Normal -0.1
CPT0105250003 Normal -0.1
CPT0118240003 Normal -0.1
CPT0109700003 Normal -0.1
CPT0147000003 Normal -0.1
CPT0148000003 Normal -0.1
CPT0011930003 Normal -0.1
CPT0086310003 Tumor -0.2
CPT0001970003 Normal -0.2
CPT0067770003 Normal -0.2
CPT0118890003 Normal -0.2
CPT0089360003 Normal -0.2
CPT0067470004 Normal -0.2
CPT0111590003 Normal -0.2
CPT0146800003 Normal -0.2
CPT0015420003 Normal -0.2
CPT0111480003 Normal -0.2
CPT0105010004 Normal -0.2
CPT0067950003 Normal -0.2
CPT0001390003 Normal -0.2
CPT0109830004 Tumor -0.2
CPT0105550003 Normal -0.2
CPT0070080003 Normal -0.2
CPT0090200003 Normal -0.2
CPT0118360003 Normal -0.2
CPT0090720003 Normal -0.2
CPT0114690003 Normal -0.2
CPT0110890003 Normal -0.2
CPT0147580004 Tumor -0.2
CPT0067110003 Normal -0.2
CPT0066810003 Normal -0.2
CPT0146680004 Tumor -0.2
CPT0105680003 Normal -0.2
CPT0148280004 Tumor -0.2
CPT0118600003 Normal -0.3
CPT0118880003 Tumor -0.3
CPT0067290003 Normal -0.3
CPT0014930003 Normal -0.3
CPT0021450003 Tumor -0.3
CPT0097600003 Normal -0.3
CPT0069370003 Normal -0.3
CPT0068650003 Normal -0.3
CPT0125830003 Normal -0.3
CPT0068130003 Normal -0.3
CPT0083420003 Normal -0.3
CPT0068830003 Normal -0.3
CPT0014290003 Normal -0.3
CPT0090900004 Normal -0.3
CPT0062810003 Normal -0.3
CPT0114010003 Normal -0.3
CPT0146600003 Normal -0.3
CPT0147400003 Normal -0.3
CPT0082770003 Normal -0.4
CPT0092940003 Normal -0.4
CPT0112080003 Normal -0.4
CPT0090600003 Normal -0.4
CPT0105370004 Normal -0.4
CPT0105610003 Normal -0.4
CPT0105980003 Normal -0.4
CPT0013910003 Normal -0.5
CPT0115090003 Normal -0.5
CPT0023320003 Normal -0.5
CPT0079850003 Normal -0.5
CPT0118180003 Normal -0.5
CPT0011910004 Tumor -0.5
CPT0091260003 Normal -0.5
CPT0001810003 Normal -0.6
CPT0008420003 Normal -0.6
CPT0090370003 Normal -0.6
CPT0066930003 Normal -0.7
CPT0118650003 Normal -0.7
CPT0114880003 Normal -0.7
CPT0001690003 Normal -0.7
CPT0106100003 Normal -0.8
CPT0021490003 Normal -0.8
CPT0083810003 Normal -0.8
CPT0069720003 Normal -0.8
CPT0118010003 Normal -0.9
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0197740003 Tumor 0.8
CPT0197090003 Tumor 0.7
CPT0146380004 Tumor 0.7
CPT0091820003 Tumor 0.6
CPT0147680004 Tumor 0.6
CPT0237760003 Tumor 0.6
CPT0204990003 Tumor 0.6
CPT0068280003 Tumor 0.6
CPT0209490003 Tumor 0.6
CPT0245830003 Tumor 0.6
CPT0195510003 Tumor 0.6
CPT0197210003 Tumor 0.5
CPT0010050003 Tumor 0.5
CPT0083980003 Tumor 0.5
CPT0183250004 Tumor 0.5
CPT0091050003 Tumor 0.5
CPT0191860003 Tumor 0.5
CPT0237690004 Tumor 0.5
CPT0146480004 Tumor 0.5
CPT0208770003 Tumor 0.5
CPT0086260003 Tumor 0.5
CPT0245780003 Tumor 0.5
CPT0079100003 Tumor 0.4
CPT0237060004 Tumor 0.4
CPT0102790003 Tumor 0.4
CPT0105420003 Tumor 0.4
CPT0238110004 Tumor 0.4
CPT0001020003 Tumor 0.4
CPT0227400003 Tumor 0.4
CPT0175560003 Tumor 0.4
CPT0126740003 Tumor 0.4
CPT0117720003 Tumor 0.4
CPT0104360003 Tumor 0.4
CPT0197150003 Tumor 0.4
CPT0191710003 Tumor 0.4
CPT0221200003 Tumor 0.4
CPT0202020008 Tumor 0.4
CPT0237200004 Tumor 0.4
CPT0223790003 Tumor 0.4
CPT0130270003 Tumor 0.4
CPT0218280003 Tumor 0.4
CPT0202530004 Tumor 0.4
CPT0219360003 Tumor 0.4
CPT0237410004 Tumor 0.4
CPT0234790003 Tumor 0.4
CPT0232670003 Tumor 0.4
CPT0128890003 Tumor 0.4
CPT0079050003 Tumor 0.4
CPT0237550004 Tumor 0.3
CPT0069890003 Tumor 0.3
CPT0209020004 Tumor 0.3
CPT0090440003 Tumor 0.3
CPT0186180003 Tumor 0.3
CPT0217420003 Tumor 0.3
CPT0204800003 Tumor 0.3
CPT0234930004 Tumor 0.3
CPT0126390003 Tumor 0.3
CPT0115830003 Tumor 0.3
CPT0023470003 Tumor 0.3
CPT0236420003 Tumor 0.3
CPT0104930003 Tumor 0.3
CPT0112650003 Tumor 0.3
CPT0234560003 Tumor 0.3
CPT0126670003 Tumor 0.3
CPT0130410003 Tumor 0.2
CPT0063480003 Tumor 0.2
CPT0130030003 Tumor 0.2
CPT0192540004 Tumor 0.2
CPT0225380003 Tumor 0.2
CPT0202170003 Tumor 0.2
CPT0126530003 Tumor 0.2
CPT0223820003 Normal 0.2
CPT0098770003 Tumor 0.2
CPT0089880003 Tumor 0.2
CPT0087190003 Tumor 0.2
CPT0147180004 Tumor 0.2
CPT0126830003 Normal 0.2
CPT0112580003 Tumor 0.2
CPT0126810003 Tumor 0.2
CPT0101130003 Tumor 0.2
CPT0202350004 Tumor 0.1
CPT0175260003 Tumor 0.1
CPT0175390003 Tumor 0.1
CPT0186210003 Normal 0.1
CPT0175120003 Tumor 0.1
CPT0130440004 Normal 0.1
CPT0010060003 Normal 0.1
CPT0237210003 Normal 0.1
CPT0007740003 Tumor 0.1
CPT0202720003 Tumor 0.1
CPT0237970004 Tumor 0.1
CPT0186130003 Tumor 0.1
CPT0112540003 Tumor 0.1
CPT0126450003 Tumor 0.1
CPT0190550003 Tumor 0.0
CPT0136640003 Tumor 0.0
CPT0064040003 Tumor 0.0
CPT0063430003 Tumor 0.0
CPT0126760003 Normal 0.0
CPT0111150004 Tumor 0.0
CPT0233600003 Tumor 0.0
CPT0091610003 Tumor 0.0
CPT0208780003 Normal 0.0
CPT0241170003 Tumor 0.0
CPT0197380003 Normal 0.0
CPT0233320003 Tumor 0.0
CPT0221650003 Tumor 0.0
CPT0222740003 Normal 0.0
CPT0245880003 Tumor 0.0
CPT0245790003 Normal 0.0
CPT0207210003 Tumor 0.0
CPT0108560003 Tumor -0.1
CPT0112660003 Normal -0.1
CPT0147700003 Normal -0.1
CPT0112720003 Tumor -0.1
CPT0187370003 Tumor -0.1
CPT0196810003 Tumor -0.1
CPT0221660003 Normal -0.1
CPT0195520003 Normal -0.1
CPT0063440003 Normal -0.1
CPT0202220004 Normal -0.1
CPT0023500003 Normal -0.1
CPT0112600003 Normal -0.1
CPT0233120003 Tumor -0.1
CPT0221220003 Normal -0.2
CPT0197480003 Tumor -0.2
CPT0105430003 Normal -0.2
CPT0237710003 Normal -0.2
CPT0007760003 Normal -0.2
CPT0238130003 Normal -0.2
CPT0227420003 Normal -0.2
CPT0237570003 Normal -0.2
CPT0222730003 Tumor -0.2
CPT0237080003 Normal -0.2
CPT0104380003 Normal -0.2
CPT0175270003 Normal -0.2
CPT0128900003 Normal -0.2
CPT0197170003 Normal -0.2
CPT0126470003 Normal -0.2
CPT0218310003 Normal -0.2
CPT0126400003 Normal -0.2
CPT0001030003 Normal -0.2
CPT0205000003 Normal -0.2
CPT0233640003 Normal -0.3
CPT0197860003 Normal -0.3
CPT0232690003 Normal -0.3
CPT0108600003 Normal -0.3
CPT0202400004 Normal -0.3
CPT0191750003 Normal -0.3
CPT0191930003 Normal -0.3
CPT0111000004 Normal -0.3
CPT0209040003 Normal -0.3
CPT0079060003 Normal -0.3
CPT0202740003 Normal -0.3
CPT0079110003 Normal -0.3
CPT0225470003 Normal -0.3
CPT0233160003 Normal -0.3
CPT0146500003 Normal -0.3
CPT0236430003 Normal -0.3
CPT0146400003 Normal -0.3
CPT0241210003 Normal -0.3
CPT0115860003 Normal -0.3
CPT0175410003 Normal -0.3
CPT0234820003 Normal -0.4
CPT0102840003 Normal -0.4
CPT0204600003 Tumor -0.4
CPT0234580003 Normal -0.4
CPT0237780003 Normal -0.4
CPT0136660003 Normal -0.4
CPT0175160003 Normal -0.4
CPT0204820003 Normal -0.4
CPT0123350003 Tumor -0.4
CPT0098800003 Normal -0.4
CPT0219390003 Normal -0.4
CPT0183270003 Normal -0.4
CPT0086270003 Normal -0.4
CPT0217490003 Normal -0.4
CPT0237430003 Normal -0.4
CPT0130310003 Normal -0.4
CPT0091090003 Normal -0.4
CPT0204660003 Normal -0.4
CPT0207250003 Normal -0.4
CPT0245840003 Normal -0.4
CPT0187380003 Normal -0.4
CPT0245890003 Normal -0.5
CPT0083990003 Normal -0.5
CPT0091620003 Normal -0.5
CPT0196820003 Normal -0.5
CPT0130070003 Normal -0.5
CPT0227020003 Tumor -0.5
CPT0112550003 Normal -0.5
CPT0209510003 Normal -0.5
CPT0197520003 Normal -0.5
CPT0202040003 Normal -0.6
CPT0112730003 Normal -0.6
CPT0104950003 Normal -0.6
CPT0087210003 Normal -0.6
CPT0197100003 Normal -0.6
CPT0147200003 Normal -0.6
CPT0192590004 Normal -0.6
CPT0063500003 Normal -0.6
CPT0068320003 Normal -0.6
CPT0064050003 Normal -0.7
CPT0237990003 Normal -0.7
CPT0123370003 Normal -0.7
CPT0233330003 Normal -0.7
CPT0202580004 Normal -0.8
CPT0186140003 Normal -0.8
CPT0227070003 Normal -0.9
CPT0117770003 Normal -0.9
CPT0069900003 Normal -0.9
CPT0234950004 Normal -1.1
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA049719
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS

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