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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:195.7 nTPM
HPA:42.0 nTPM
GTEx:195.7 nTPM
FANTOM5:311.4 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029853
Cholangiocytes Not detected
Hepatocytes High



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.0
N/A
Female, age 60
Liver sample 21
nTPM: 154.2
overview
Male, age 54
Liver sample 23
nTPM: 105
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 119.2
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 0.9
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 0.1
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 10.7
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 5.8
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 1.7
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 19
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

195.7
GTEx sample id Sample description nTPM
Liver
Average nTPM: 195.7
Samples: 226

Max nTPM: 940.1
Min nTPM: 4.1
Std nTPM: 183.2
Median nTPM: 139.6
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 940.1
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 769.9
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 768.6
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 728.6
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 616.9
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 612.7
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 608.1
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 605.7
GTEX-14E7W-1526-SM-6871X 70-79 years, male 602.5
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 602.1
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 600.3
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 592.1
GTEX-11GSP-0626-SM-5986T 60-69 years, female 573.9
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 567.1
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 563.0
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 551.8
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 538.9
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 532.7
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 518.6
GTEX-13112-1426-SM-5EGH8 50-59 years, male 517.9
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 489.8
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 488.9
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 476.6
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 471.9
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 468.4
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 452.9
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 435.8
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 425.3
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 424.6
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 417.0
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 415.8
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 413.1
GTEX-18A7A-1526-SM-72D69 50-59 years, female 409.5
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 379.6
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 375.1
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 366.2
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 358.3
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 357.4
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 356.7
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 354.3
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 351.7
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 349.0
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 348.1
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 342.1
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 338.5
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 331.1
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 327.9
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 319.8
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 317.0
GTEX-YECK-1926-SM-4W21H 60-69 years, male 316.0
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 314.9
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 313.3
GTEX-14JG1-1626-SM-664NH 40-49 years, male 311.4
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 308.7
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 308.1
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 297.8
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 297.0
GTEX-RU72-1426-SM-46MUF 50-59 years, female 282.9
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 278.4
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 278.4
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 277.9
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 273.2
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 272.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 268.5
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 264.5
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 257.3
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 252.6
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 246.8
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 245.2
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 244.5
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 241.9
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 241.1
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 238.0
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 237.7
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 234.3
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 233.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 231.6
GTEX-144GL-1426-SM-79OMA 50-59 years, male 229.9
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 229.9
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 228.0
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 226.0
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 224.5
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 224.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 216.2
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 215.2
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 214.1
GTEX-1399T-0826-SM-5IFES 60-69 years, male 213.6
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 206.3
GTEX-18465-1626-SM-7LG6N 50-59 years, male 200.8
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 198.9
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 198.1
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 197.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 190.7
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 184.2
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 179.6
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 171.4
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 168.8
GTEX-1B933-1226-SM-731DW 50-59 years, female 165.3
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 164.7
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 164.2
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 163.4
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 159.6
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 159.2
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 158.4
GTEX-QEL4-1226-SM-447A4 50-59 years, male 157.7
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 156.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 153.1
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 152.2
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 148.6
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 146.8
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 146.2
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 142.3
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 142.0
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 137.1
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 135.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 133.9
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 127.6
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 126.6
GTEX-QESD-2026-SM-447BI 20-29 years, male 123.0
GTEX-X261-1726-SM-4PQYT 50-59 years, male 119.1
GTEX-S33H-1626-SM-4AD68 30-39 years, male 116.2
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 113.6
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 113.2
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 111.8
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 110.8
GTEX-17F96-1226-SM-79OK2 70-79 years, male 109.4
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 109.1
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 104.6
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 104.5
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 104.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 98.0
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 92.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 92.2
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 91.3
GTEX-11ZUS-2526-SM-59872 30-39 years, male 88.2
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 88.2
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 87.1
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 83.9
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 83.1
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 80.4
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 79.8
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 79.6
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 77.2
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 75.6
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 75.5
GTEX-1B932-1426-SM-793AN 40-49 years, female 73.6
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 72.9
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 72.7
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 67.8
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 67.7
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 66.5
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 66.0
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 65.8
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 63.6
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 62.9
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 62.9
GTEX-Q734-0326-SM-48U15 40-49 years, female 60.5
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 60.5
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 59.9
GTEX-14PHX-0526-SM-664NW 50-59 years, male 59.8
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 58.6
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 58.0
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 56.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 56.3
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 52.7
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 52.3
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 51.1
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 50.0
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 49.1
GTEX-RN64-1826-SM-48FDV 50-59 years, male 47.6
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 47.5
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 45.3
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 44.2
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 43.2
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 42.2
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 41.9
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 41.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 40.7
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 40.3
GTEX-14XAO-0226-SM-68728 60-69 years, female 40.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 39.2
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 38.9
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 38.1
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 37.2
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 35.1
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 34.6
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 33.2
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 33.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 32.9
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 32.2
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 31.8
GTEX-O5YV-0726-SM-EV798 60-69 years, female 29.5
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 28.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 28.4
GTEX-12696-0826-SM-5EGGE 60-69 years, male 28.1
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 27.3
GTEX-R53T-0326-SM-48FEC 50-59 years, female 27.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 26.8
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 26.6
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 26.0
GTEX-REY6-1226-SM-48FDR 60-69 years, male 25.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 24.2
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 23.0
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 22.2
GTEX-13113-1326-SM-5GCOI 60-69 years, female 21.8
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 21.8
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 20.6
GTEX-18A66-2026-SM-7189C 60-69 years, male 20.0
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 19.7
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 19.0
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 18.9
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 18.4
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 17.6
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 16.7
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 16.3
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 16.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 15.6
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 14.0
GTEX-17HHE-0126-SM-79398 50-59 years, male 12.7
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 12.7
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 12.1
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 12.1
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 11.3
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 10.6
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 9.8
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 4.1
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

311.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 311.4
FF:10018-101C9 64,69,70 years, mixed 311.4

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