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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:135.2 nTPM
HPA Brain:71.3 nTPM
GTEx:135.2 nTPM
FANTOM5:128.7 Scaled Tags Per Million
Pig:45.1 nTPM
Mouse:137.2 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027481Antibody HPA028722
Glial cells Not detectedNot detected
Neuronal cells MediumLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 70.9
1857 Female, age 85, left hemisphere 81.9
2481 Female, age 94, left hemisphere 80.5
2846 Female, age 79, unknown 77.7
1854 Male, age 80, left hemisphere 72.9
2290 Female, age 72, unknown 71.0
2288 Male, age 75, left hemisphere 66.9
1781 Male, age 74, unknown 60.2
2289 Male, age 61, right hemisphere 56.4
Globus pallidus, externus
nTPM: 57.2
1996 Male, age 80, right hemisphere 76.9
2772 Female, age 79, unknown 74.5
2395 Male, age 75, both hemispheres 55.2
2646 Male, age 61, right hemisphere 41.7
2567 Female, age 72, unknown 37.7
Globus pallidus, internus
nTPM: 58.5
2037 Male, age 80, right hemisphere 75.1
2287 Male, age 75, right hemisphere 70.6
1818 Male, age 74, unknown 65.2
2483 Female, age 94, right hemisphere 62.4
2778 Female, age 91, both hemispheres 55.8
2566 Female, age 72, unknown 42.7
2111 Female, age 85, right hemisphere 37.7
Nucleus accumbens
nTPM: 71.3
1856 Female, age 91, right hemisphere 89.9
2698 Female, age 72, unknown 79.0
1806 Female, age 85, left hemisphere 74.9
2286 Male, age 75, left hemisphere 72.5
1783 Male, age 74, unknown 71.1
2824 Male, age 61, right hemisphere 64.2
2391 Female, age 94, left hemisphere 63.7
2732 Male, age 80, right hemisphere 55.2
Nucleus basalis of Meynert
nTPM: 56.2
2393 Male, age 80, right hemisphere 64.0
2821 Male, age 75, both hemispheres 60.4
2484 Female, age 94, left hemisphere 52.9
2569 Male, age 61, both hemispheres 47.4
Nucleus of the diagonal band
nTPM: 68.9
1812 Female, age 91, both hemispheres 83.5
2775 Male, age 80, right hemisphere 73.8
2029 Male, age 61, right hemisphere 64.3
2195 Female, age 85, both hemispheres 61.9
1979 Male, age 74, unknown 60.8
Putamen
nTPM: 61.7
1838 Male, age 80, right hemisphere 81.0
2482 Female, age 94, left hemisphere 75.5
1937 Female, age 91, right hemisphere 70.8
1829 Male, age 74, unknown 63.8
2466 Female, age 79, unknown 61.1
2489 Female, age 72, unknown 42.9
2647 Male, age 75, left hemisphere 36.4
Septal nuclei
nTPM: 65.1
2629 Female, age 94, right hemisphere 77.5
2009 Female, age 91, both hemispheres 73.0
2031 Female, age 72, unknown 69.3
1960 Male, age 74, unknown 68.5
2199 Male, age 80, right hemisphere 64.2
2059 Female, age 85, both hemispheres 56.5
2394 Male, age 61, left hemisphere 46.8
Stria terminalis, bed nucleus
nTPM: 54.7
1974 Female, age 91, both hemispheres 64.0
2486 Female, age 94, both hemispheres 50.2
2201 Male, age 74, unknown 49.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 126.5
Samples: 246

Max nTPM: 263.3
Min nTPM: 77.3
Std nTPM: 25.1
Median nTPM: 121.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 263.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 248.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 216.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 212.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 203.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 197.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 186.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 183.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 178.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 174.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 171.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 170.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 169.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 166.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 165.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 165.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 165.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 164.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 161.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 160.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 159.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 159.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 157.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 157.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 157.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 156.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 156.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 156.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 152.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 150.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 148.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 148.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 147.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 145.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 145.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 145.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 145.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 144.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 144.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 143.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 143.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 142.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 141.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 141.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 141.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 140.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 140.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 140.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 139.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 138.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 138.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 138.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 138.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 137.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 137.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 137.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 137.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 136.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 135.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 135.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 135.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 135.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 135.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 134.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 134.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 134.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 134.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 134.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 134.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 133.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 133.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 133.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 132.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 132.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 132.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 132.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 132.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 131.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 131.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 131.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 131.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 131.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 130.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 130.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 130.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 130.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 130.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 130.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 129.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 129.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 128.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 128.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 128.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 127.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 127.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 127.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 127.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 127.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 126.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 126.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 126.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 126.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 126.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 125.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 125.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 125.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 124.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 124.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 123.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 123.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 123.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 123.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 123.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 123.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 123.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 122.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 122.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 121.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 121.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 121.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 121.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 121.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 121.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 121.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 121.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 121.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 121.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 120.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 120.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 120.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 120.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 119.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 119.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 119.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 119.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 119.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 119.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 119.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 118.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 118.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 118.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 118.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 118.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 118.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 118.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 117.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 117.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 117.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 117.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 117.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 117.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 117.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 117.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 117.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 116.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 116.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 116.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 116.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 116.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 116.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 116.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 116.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 115.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 115.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 115.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 115.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 115.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 114.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 114.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 114.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 114.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 114.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 114.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 113.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 113.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 113.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 113.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 113.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 113.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 113.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 113.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 113.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 112.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 112.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 112.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 112.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 112.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 112.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 111.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 111.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 110.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 110.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 110.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 110.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 110.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 110.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 110.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 109.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 109.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 108.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 107.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 107.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 107.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 107.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 107.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 106.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 106.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 105.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 104.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 103.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 102.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 102.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 102.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 101.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 101.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 101.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 100.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 100.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 99.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 99.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 99.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 99.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 97.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 97.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 97.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 94.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 94.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 93.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 92.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 91.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 91.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 90.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 90.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 89.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 89.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 89.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 86.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 83.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 77.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 135.2
Samples: 246

Max nTPM: 325.0
Min nTPM: 69.0
Std nTPM: 29.4
Median nTPM: 132.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 325.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 280.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 216.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 214.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 201.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 200.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 200.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 199.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 190.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 185.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 184.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 182.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 181.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 176.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 175.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 175.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 173.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 171.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 169.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 169.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 168.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 168.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 167.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 167.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 166.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 166.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 165.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 164.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 163.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 163.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 163.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 162.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 162.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 162.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 161.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 160.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 159.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 159.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 159.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 159.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 159.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 158.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 158.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 158.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 157.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 157.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 157.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 156.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 156.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 155.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 154.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 154.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 153.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 153.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 152.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 152.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 152.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 151.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 150.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 150.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 150.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 149.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 149.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 148.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 148.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 148.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 148.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 147.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 147.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 147.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 147.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 147.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 146.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 146.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 146.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 146.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 146.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 145.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 145.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 144.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 144.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 144.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 143.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 143.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 142.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 142.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 142.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 141.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 141.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 141.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 140.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 140.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 140.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 140.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 140.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 139.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 139.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 139.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 139.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 139.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 139.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 138.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 138.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 138.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 138.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 137.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 137.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 137.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 136.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 136.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 135.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 135.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 134.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 134.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 134.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 134.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 134.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 134.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 134.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 134.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 133.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 133.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 132.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 132.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 132.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 131.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 131.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 131.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 131.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 131.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 130.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 130.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 130.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 130.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 129.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 129.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 129.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 128.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 128.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 128.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 127.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 127.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 127.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 127.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 126.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 126.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 125.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 125.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 125.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 125.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 125.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 125.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 125.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 125.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 124.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 124.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 124.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 124.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 123.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 123.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 123.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 123.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 122.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 121.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 121.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 120.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 120.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 120.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 120.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 119.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 119.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 119.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 118.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 118.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 118.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 118.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 117.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 117.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 117.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 117.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 116.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 116.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 116.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 116.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 116.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 116.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 116.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 115.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 114.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 113.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 113.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 113.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 113.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 113.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 112.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 112.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 111.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 111.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 111.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 111.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 111.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 110.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 110.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 110.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 110.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 109.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 109.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 109.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 109.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 109.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 108.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 108.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 108.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 107.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 107.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 106.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 105.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 104.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 104.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 103.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 103.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 103.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 103.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 103.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 102.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 102.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 102.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 102.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 101.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 98.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 98.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 98.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 97.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 97.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 95.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 95.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 94.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 94.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 90.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 82.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 81.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 81.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 79.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 77.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 69.0
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Brain - Putamen (basal ganglia)
Average nTPM: 124.5
Samples: 205

Max nTPM: 209.0
Min nTPM: 72.2
Std nTPM: 23.8
Median nTPM: 121.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 209.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 203.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 189.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 186.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 182.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 182.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 181.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 180.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 180.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 175.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 175.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 174.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 174.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 167.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 163.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 162.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 161.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 160.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 158.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 153.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 153.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 152.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 151.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 151.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 147.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 147.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 147.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 147.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 145.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 145.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 145.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 145.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 145.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 144.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 143.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 143.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 142.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 141.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 141.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 140.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 140.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 139.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 139.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 139.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 138.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 137.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 137.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 137.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 137.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 136.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 136.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 136.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 135.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 134.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 134.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 133.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 133.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 133.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 133.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 133.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 133.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 133.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 132.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 132.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 132.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 132.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 132.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 131.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 131.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 131.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 131.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 131.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 130.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 130.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 130.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 129.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 129.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 129.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 128.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 128.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 127.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 127.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 126.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 126.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 126.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 125.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 125.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 125.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 125.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 124.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 124.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 124.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 124.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 124.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 124.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 124.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 123.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 123.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 123.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 122.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 122.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 121.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 121.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 121.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 120.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 120.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 120.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 120.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 120.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 120.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 119.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 119.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 119.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 119.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 119.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 118.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 118.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 118.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 117.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 117.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 117.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 116.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 116.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 116.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 116.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 116.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 116.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 116.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 115.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 115.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 115.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 115.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 114.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 113.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 113.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 113.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 113.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 112.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 112.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 112.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 112.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 112.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 111.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 111.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 111.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 111.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 111.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 110.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 110.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 110.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 110.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 109.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 109.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 109.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 108.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 108.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 108.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 108.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 108.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 107.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 107.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 107.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 106.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 106.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 106.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 106.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 105.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 105.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 105.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 104.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 104.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 102.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 101.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 101.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 101.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 100.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 99.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 99.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 99.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 99.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 98.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 97.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 96.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 96.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 96.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 95.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 94.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 94.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 93.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 92.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 92.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 91.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 90.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 89.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 89.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 89.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 89.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 88.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 87.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 85.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 85.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 84.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 82.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 79.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 72.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

128.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 106.5
FF:10164-103B2 76 years, female 106.5
Nucleus accumbens
Scaled Tags Per Million: 103.9
FF:10037-101F1 23-56 years, mixed 103.9
Putamen
Scaled Tags Per Million: 128.7
FF:10176-103C5 60 years, female 128.7
Globus pallidus
Scaled Tags Per Million: 77.2
FF:10161-103A8 76 years, female 86.1
FF:10175-103C4 60 years, female 68.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.1
Pig sample Sample description nTPM
Caudate
nTPM: 36.8
Samples: 4

Max nTPM: 39.0
Min nTPM: 35.7
Sample A Female 35.7
Sample B Female 36.0
Sample C Male 39.0
Sample D Male 36.5
Putamen
nTPM: 45.1
Samples: 4

Max nTPM: 59.9
Min nTPM: 38.0
Sample A Female 38.0
Sample B Female 39.5
Sample C Male 59.9
Sample D Male 43.0
Septum
nTPM: 38.5
Samples: 4

Max nTPM: 41.8
Min nTPM: 35.9
Sample A Female 35.9
Sample B Female 37.7
Sample C Male 41.8
Sample D Male 38.4
Ventral pallidum
nTPM: 38.4
Samples: 4

Max nTPM: 45.3
Min nTPM: 32.9
Sample A Female 32.9
Sample B Female 45.3
Sample C Male 39.3
Sample D Male 36.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 137.2
Samples: 4

Max nTPM: 140.4
Min nTPM: 135.3
Sample A Male 137.7
Sample B Male 140.4
Sample C Female 135.3
Sample D Female 135.3
Septum
nTPM: 131.7
Samples: 4

Max nTPM: 151.1
Min nTPM: 117.7
Sample A Male 121.0
Sample B Male 151.1
Sample C Female 136.8
Sample D Female 117.7
Ventral forebrain
nTPM: 132.3
Samples: 4

Max nTPM: 145.1
Min nTPM: 126.2
Sample A Male 126.2
Sample B Male 129.8
Sample C Female 145.1
Sample D Female 127.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
1637 Antisense, RP_040604_01_C09, Mouse strain C57BL/6J (56 days, male) 0.2
1638 Antisense, RP_040604_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.2
1637 Antisense, RP_040604_01_C09, Mouse strain C57BL/6J (56 days, male) 0.2
1638 Antisense, RP_040604_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1

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