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UBAP2L
HPA
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  • UBAP2L
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

UBAP2L
Synonyms KIAA0144, NICE-4
Gene descriptioni

Full gene name according to HGNC.

Ubiquitin associated protein 2 like
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband q21.3
Chromosome location (bp) 154220179 - 154271510
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000143569 (version 109)
Entrez gene 9898
HGNC HGNC:29877
UniProt Q14157 (UniProt - Evidence at protein level)
neXtProt NX_Q14157
GeneCards UBAP2L
Antibodypedia UBAP2L antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Recruits the ubiquitination machinery to RNA polymerase II for polyubiquitination, removal and degradation, when the transcription-coupled nucleotide excision repair (TC-NER) machinery fails to resolve DNA damage 1. Plays an important role in the activity of long-term repopulating hematopoietic stem cells (LT-HSCs) (By similarity). Is a regulator of stress granule assembly, required for their efficient formation 2, 3. Required for proper brain development and neocortex lamination (By similarity).... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables RNA binding activity. Involved in binding activity of sperm to zona pellucida and stress granule assembly. Acts upstream of or within hematopoietic stem cell homeostasis. Part of PcG protein complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
UBAP2L-201
ENSP00000271877
ENST00000271877
F8W726
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
1079 aa
113.6 kDa
No 0
UBAP2L-202
ENSP00000345308
ENST00000343815
Q14157
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0007339 [binding of sperm to zona pellucida]
GO:0010494 [cytoplasmic stress granule]
GO:0031519 [PcG protein complex]
GO:0034063 [stress granule assembly]
GO:0061484 [hematopoietic stem cell homeostasis]
Show all
983 aa
103.9 kDa
No 0
UBAP2L-203
ENSP00000355343
ENST00000361546
Q14157
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0007339 [binding of sperm to zona pellucida]
GO:0010494 [cytoplasmic stress granule]
GO:0031519 [PcG protein complex]
GO:0034063 [stress granule assembly]
GO:0061484 [hematopoietic stem cell homeostasis]
Show all
1087 aa
114.5 kDa
No 0
UBAP2L-204
ENSP00000357490
ENST00000368504
Q5VU77
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
350 aa
38 kDa
No 0
UBAP2L-205
ENSP00000389052
ENST00000412596
Q5VU78
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
280 aa
30.7 kDa
No 0
UBAP2L-206
ENSP00000398609
ENST00000428595
H0Y5H6
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
383 aa
40.1 kDa
No 0
UBAP2L-207
ENSP00000389445
ENST00000428931
Q14157
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0007339 [binding of sperm to zona pellucida]
GO:0010494 [cytoplasmic stress granule]
GO:0031519 [PcG protein complex]
GO:0034063 [stress granule assembly]
GO:0061484 [hematopoietic stem cell homeostasis]
Show all
1087 aa
114.5 kDa
No 0
UBAP2L-208
ENSP00000407672
ENST00000433615
H7C2T8
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
399 aa
41.4 kDa
No 0
UBAP2L-209
ENSP00000389717
ENST00000437652
Q5VU79
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
265 aa
29.2 kDa
No 0
UBAP2L-210
ENSP00000399920
ENST00000441890
Q5VU81
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
182 aa
20.2 kDa
No 0
UBAP2L-211
ENSP00000415310
ENST00000456325
Q5VU80
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
234 aa
25.7 kDa
No 0
UBAP2L-220
ENSP00000478447
ENST00000613315
Q14157
[Direct mapping] Ubiquitin-associated protein 2-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0007339 [binding of sperm to zona pellucida]
GO:0010494 [cytoplasmic stress granule]
GO:0031519 [PcG protein complex]
GO:0034063 [stress granule assembly]
GO:0061484 [hematopoietic stem cell homeostasis]
Show all
976 aa
103.2 kDa
No 0

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