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  • RPS27A
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:348.0 nTPM
FANTOM5:21.6 Scaled Tags Per Million
Pig:71.2 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

348.0
Sample id Sample description nTPM
Area postrema
nTPM: 348.0
2799 Male, age 61, both hemispheres 456.9
2306 Male, age 80, both hemispheres 324.4
2054 Male, age 76, both hemispheres 262.6
Dorsal medullary reticular nucleus
nTPM: 258.6
2040 Female, age 85, both hemispheres 287.9
2373 Male, age 61, both hemispheres 276.5
2088 Male, age 76, both hemispheres 211.3
Dorsal motor vagal complex
nTPM: 313.1
2797 Male, age 61, both hemispheres 527.7
2643 Male, age 74, both hemispheres 364.9
2807 Female, age 85, both hemispheres 336.8
2133 Female, age 91, both hemispheres 287.7
2844 Male, age 55, unknown 266.3
2000 Male, age 74, unknown 260.2
2813 Female, age 72, unknown 240.9
2185 Male, age 76, both hemispheres 220.2
Gigantocellular reticular nuclei, medullary
nTPM: 272.9
2314 Male, age 61, both hemispheres 333.9
2387 Female, age 91, both hemispheres 308.3
2022 Male, age 76, right hemisphere 269.4
1876 Female, age 85, both hemispheres 258.1
2310 Male, age 80, both hemispheres 251.2
2462 Male, age 74, both hemispheres 216.5
Gigantocellular reticular nuclei, pars
nTPM: 227.7
2084 Female, age 85, both hemispheres 254.5
2706 Male, age 80, both hemispheres 249.8
2336 Male, age 61, both hemispheres 216.9
2330 Male, age 80, both hemispheres 210.5
2168 Male, age 76, both hemispheres 206.9
Inferior olive
nTPM: 320.4
2379 Male, age 80, both hemispheres 370.1
2563 Male, age 74, both hemispheres 354.3
2178 Male, age 61, both hemispheres 306.3
2085 Female, age 85, both hemispheres 301.0
2628 Female, age 91, both hemispheres 270.3
Lateral medullary reticular nucleus
nTPM: 292.5
2804 Female, age 91, both hemispheres 357.7
2852 Male, age 80, both hemispheres 333.4
2190 Female, age 85, both hemispheres 293.8
2305 Male, age 74, both hemispheres 261.0
2044 Male, age 76, both hemispheres 257.9
2374 Male, age 61, both hemispheres 251.2
Medial olivary nucleus
nTPM: 336.2
1943 Male, age 61, both hemispheres 394.9
2138 Female, age 91, both hemispheres 335.3
1962 Male, age 76, both hemispheres 328.7
2851 Male, age 80, both hemispheres 285.9
Medial vestibular nucleus
nTPM: 257.9
2803 Female, age 91, both hemispheres 330.6
2801 Male, age 74, both hemispheres 270.8
2093 Male, age 80, both hemispheres 258.7
2743 Female, age 85, both hemispheres 250.8
2624 Male, age 61, both hemispheres 230.9
2134 Male, age 76, both hemispheres 205.7
Motor hypoglossal nucleus
nTPM: 254.4
2132 Female, age 85, both hemispheres 300.1
2125 Female, age 91, both hemispheres 291.1
2182 Male, age 80, both hemispheres 251.0
2461 Male, age 61, both hemispheres 225.1
2277 Male, age 76, both hemispheres 204.9
Nucleus ambiguus
nTPM: 281.5
2071 Male, age 76, both hemispheres 313.1
2096 Female, age 85, both hemispheres 249.9
Nucleus cuneatus
nTPM: 287.9
2805 Female, age 91, both hemispheres 367.6
2808 Female, age 85, both hemispheres 351.3
2376 Male, age 61, both hemispheres 322.0
2380 Male, age 80, both hemispheres 317.1
2564 Male, age 74, both hemispheres 305.6
2381 Male, age 80, both hemispheres 281.6
2562 Male, age 61, both hemispheres 277.4
2100 Male, age 76, both hemispheres 184.8
2131 Male, age 76, both hemispheres 183.4
Nucleus gracilis
nTPM: 315.9
2382 Male, age 80, both hemispheres 352.9
2299 Female, age 85, both hemispheres 320.2
2627 Male, age 74, both hemispheres 274.6
Nucleus raphe obscurus
nTPM: 333.0
2800 Male, age 61, midline 358.7
2845 Female, age 85, midline 342.8
2142 Male, age 76, midline 297.5
Nucleus raphe pallidus
nTPM: 291.3
1924 Male, age 61, midline 358.3
2145 Male, age 76, midline 260.3
2183 Male, age 80, midline 255.1
Nucleus tractus solitarii
nTPM: 260.6
2144 Female, age 91, right hemisphere 364.1
2191 Female, age 85, both hemispheres 266.0
2307 Male, age 80, both hemispheres 206.3
2656 Male, age 76, both hemispheres 206.0
Parvicellular reticular nuclei
nTPM: 252.4
2119 Male, age 80, both hemispheres 270.8
2095 Male, age 76, both hemispheres 249.5
2558 Male, age 74, both hemispheres 237.0
Parvicellular reticular nuclei, medullary
nTPM: 253.0
2189 Female, age 91, both hemispheres 259.4
2091 Female, age 85, both hemispheres 259.1
2181 Male, age 80, left hemisphere 240.6
Peritrigeminal nucleus
nTPM: 278.4
2067 Female, age 85, both hemispheres 320.6
2136 Male, age 76, both hemispheres 269.5
2179 Male, age 61, both hemispheres 244.9
Prepositus hypoglossal nucleus
nTPM: 297.9
2855 Female, age 85, right hemisphere 327.9
2086 Male, age 80, both hemispheres 267.9
Spinal trigeminal nucleus, caudal
nTPM: 257.5
2642 Male, age 74, both hemispheres 284.2
2390 Female, age 91, both hemispheres 272.2
2308 Male, age 80, both hemispheres 267.9
2312 Male, age 61, both hemispheres 253.7
2447 Male, age 76, both hemispheres 209.6
Spinal trigeminal nucleus, interpolar
nTPM: 269.2
2033 Male, age 80, both hemispheres 326.7
2386 Female, age 85, both hemispheres 282.4
2389 Female, age 91, both hemispheres 280.8
2066 Male, age 76, right hemisphere 239.5
2625 Male, age 61, both hemispheres 216.8
Spinal vestibular nucleus
nTPM: 319.9
2384 Male, age 74, both hemispheres 440.3
2806 Female, age 85, both hemispheres 335.8
2780 Male, age 80, both hemispheres 304.4
2796 Male, age 61, both hemispheres 302.5
2186 Female, age 91, both hemispheres 277.8
2748 Male, age 76, both hemispheres 258.7
Superior vestibular nucleus
nTPM: 315.4
2015 Male, age 80, both hemispheres 360.6
2383 Male, age 74, both hemispheres 338.9
2061 Male, age 76, both hemispheres 246.7
Ventral medullary reticular nucleus
nTPM: 284.9
2372 Male, age 61, both hemispheres 333.7
2060 Male, age 76, both hemispheres 236.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 292.0
2118 Male, age 80, both hemispheres 338.4
2302 Female, age 91, both hemispheres 312.4
2741 Female, age 85, both hemispheres 282.6
2180 Male, age 61, both hemispheres 273.3
1986 Male, age 76, both hemispheres 253.1

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

21.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 21.6
FF:10174-103C3 60 years, female 24.4
FF:10155-103A2 76 years, female 22.7
FF:10038-101F2 18-64 years, mixed 17.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 71.2
Samples: 4

Max nTPM: 85.7
Min nTPM: 60.3
Sample A Female 62.6
Sample B Female 60.3
Sample C Male 76.1
Sample D Male 85.7

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