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WDPCP
HPA
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  • WDPCP
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

WDPCP
Synonyms BBS15, C2orf86, CPLANE5, fritz, hFrtz
Gene descriptioni

Full gene name according to HGNC.

WD repeat containing planar cell polarity effector
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p15
Chromosome location (bp) 63119559 - 63827843
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000143951 (version 109)
Entrez gene 51057
HGNC HGNC:28027
UniProt O95876 (UniProt - Evidence at protein level)
neXtProt NX_O95876
GeneCards WDPCP
Antibodypedia WDPCP antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Probable effector of the planar cell polarity signaling pathway which regulates the septin cytoskeleton in both ciliogenesis and collective cell movements. Together with FUZ and WDPCP proposed to function as core component of the CPLANE (ciliogenesis and planar polarity effectors) complex involved in the recruitment of peripheral IFT-A proteins to basal bodies (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cilium biogenesis/degradation
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a cytoplasmic WD40 repeat protein. A similar gene in frogs encodes a planar cell polarity protein that plays a critical role in collective cell movement and ciliogenesis by mediating septin localization. Mutations in this gene are associated with Bardet-Biedl syndrome 15 and may also play a role in Meckel-Gruber syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
WDPCP-201
ENSP00000272321
ENST00000272321
O95876
[Direct mapping] WD repeat-containing and planar cell polarity effector protein fritz homolog
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the circulatory system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0001736 [establishment of planar polarity]
GO:0001822 [kidney development]
GO:0002093 [auditory receptor cell morphogenesis]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0005938 [cell cortex]
GO:0007224 [smoothened signaling pathway]
GO:0007399 [nervous system development]
GO:0010762 [regulation of fibroblast migration]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016476 [regulation of embryonic cell shape]
GO:0021915 [neural tube development]
GO:0030030 [cell projection organization]
GO:0032185 [septin cytoskeleton organization]
GO:0032880 [regulation of protein localization]
GO:0042073 [intraciliary transport]
GO:0042733 [embryonic digit morphogenesis]
GO:0042995 [cell projection]
GO:0043010 [camera-type eye development]
GO:0043587 [tongue morphogenesis]
GO:0044782 [cilium organization]
GO:0045184 [establishment of protein localization]
GO:0048568 [embryonic organ development]
GO:0051893 [regulation of focal adhesion assembly]
GO:0055123 [digestive system development]
GO:0060021 [roof of mouth development]
GO:0060271 [cilium assembly]
GO:0060541 [respiratory system development]
GO:0072359 [circulatory system development]
GO:0090521 [podocyte cell migration]
GO:0097541 [axonemal basal plate]
GO:1900027 [regulation of ruffle assembly]
GO:1902017 [regulation of cilium assembly]
GO:2000114 [regulation of establishment of cell polarity]
Show all
746 aa
85.1 kDa
No 0
WDPCP-202
ENSP00000381552
ENST00000398544
O95876
[Direct mapping] WD repeat-containing and planar cell polarity effector protein fritz homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the circulatory system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001736 [establishment of planar polarity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0005938 [cell cortex]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016476 [regulation of embryonic cell shape]
GO:0021915 [neural tube development]
GO:0030030 [cell projection organization]
GO:0032185 [septin cytoskeleton organization]
GO:0032880 [regulation of protein localization]
GO:0042073 [intraciliary transport]
GO:0042733 [embryonic digit morphogenesis]
GO:0042995 [cell projection]
GO:0043587 [tongue morphogenesis]
GO:0044782 [cilium organization]
GO:0045184 [establishment of protein localization]
GO:0060021 [roof of mouth development]
GO:0060271 [cilium assembly]
GO:0097541 [axonemal basal plate]
GO:1902017 [regulation of cilium assembly]
Show all
587 aa
66.7 kDa
No 0
WDPCP-203
ENSP00000386769
ENST00000409120
E9PFG9
[Direct mapping] WD repeat-containing and planar cell polarity effector protein fritz homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the circulatory system
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0042995 [cell projection]
Show all
554 aa
62.9 kDa
No 0
WDPCP-204
ENSP00000386592
ENST00000409199
E9PFG9
[Direct mapping] WD repeat-containing and planar cell polarity effector protein fritz homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the circulatory system
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0042995 [cell projection]
Show all
554 aa
62.9 kDa
No 0
WDPCP-206
ENSP00000387222
ENST00000409562
O95876
[Direct mapping] WD repeat-containing and planar cell polarity effector protein fritz homolog
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the circulatory system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001736 [establishment of planar polarity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0005938 [cell cortex]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016476 [regulation of embryonic cell shape]
GO:0021915 [neural tube development]
GO:0030030 [cell projection organization]
GO:0032185 [septin cytoskeleton organization]
GO:0032880 [regulation of protein localization]
GO:0042073 [intraciliary transport]
GO:0042733 [embryonic digit morphogenesis]
GO:0042995 [cell projection]
GO:0043587 [tongue morphogenesis]
GO:0044782 [cilium organization]
GO:0045184 [establishment of protein localization]
GO:0060021 [roof of mouth development]
GO:0060271 [cilium assembly]
GO:0097541 [axonemal basal plate]
GO:1902017 [regulation of cilium assembly]
Show all
618 aa
71 kDa
No 0
WDPCP-210
ENSP00000396226
ENST00000431065
C9JDS5
[Direct mapping] WD repeat-containing and planar cell polarity effector protein fritz homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the circulatory system
Show all
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0042995 [cell projection]
Show all
84 aa
10.1 kDa
No 0
WDPCP-213
ENSP00000430288
ENST00000473678
A0A1D5RMS8
[Direct mapping] WD repeat-containing and planar cell polarity effector protein fritz homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the circulatory system
Show all
8 aa
0.9 kDa
No 0

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