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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:14.4 nTPM
HPA Brain:6.6 nTPM
GTEx:14.4 nTPM
FANTOM5:26.3 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:95.4 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035712
Glial cells High
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 6.6
2481 Female, age 94, left hemisphere 9.0
2846 Female, age 79, unknown 7.3
2288 Male, age 75, left hemisphere 7.1
1781 Male, age 74, unknown 7.0
1854 Male, age 80, left hemisphere 6.2
2289 Male, age 61, right hemisphere 5.6
1857 Female, age 85, left hemisphere 5.5
2290 Female, age 72, unknown 4.8
Globus pallidus, externus
nTPM: 5.3
2772 Female, age 79, unknown 8.1
1996 Male, age 80, right hemisphere 6.1
2395 Male, age 75, both hemispheres 4.6
2646 Male, age 61, right hemisphere 4.3
2567 Female, age 72, unknown 3.2
Globus pallidus, internus
nTPM: 5.2
2037 Male, age 80, right hemisphere 7.3
2287 Male, age 75, right hemisphere 6.9
1818 Male, age 74, unknown 6.4
2778 Female, age 91, both hemispheres 5.2
2483 Female, age 94, right hemisphere 4.6
2111 Female, age 85, right hemisphere 3.3
2566 Female, age 72, unknown 2.9
Nucleus accumbens
nTPM: 5.7
1856 Female, age 91, right hemisphere 6.5
2286 Male, age 75, left hemisphere 6.4
2824 Male, age 61, right hemisphere 6.2
2698 Female, age 72, unknown 5.9
1806 Female, age 85, left hemisphere 5.7
2391 Female, age 94, left hemisphere 5.3
1783 Male, age 74, unknown 5.2
2732 Male, age 80, right hemisphere 4.5
Nucleus basalis of Meynert
nTPM: 5.3
2484 Female, age 94, left hemisphere 6.6
2393 Male, age 80, right hemisphere 5.9
2821 Male, age 75, both hemispheres 4.7
2569 Male, age 61, both hemispheres 4.1
Nucleus of the diagonal band
nTPM: 5.7
1812 Female, age 91, both hemispheres 6.5
2029 Male, age 61, right hemisphere 6.1
1979 Male, age 74, unknown 5.9
2775 Male, age 80, right hemisphere 5.5
2195 Female, age 85, both hemispheres 4.4
Putamen
nTPM: 5.6
1937 Female, age 91, right hemisphere 6.7
2482 Female, age 94, left hemisphere 6.5
2466 Female, age 79, unknown 6.2
1838 Male, age 80, right hemisphere 6.0
1829 Male, age 74, unknown 5.7
2647 Male, age 75, left hemisphere 4.3
2489 Female, age 72, unknown 3.6
Septal nuclei
nTPM: 5.2
2031 Female, age 72, unknown 7.4
2629 Female, age 94, right hemisphere 5.5
2009 Female, age 91, both hemispheres 5.2
2394 Male, age 61, left hemisphere 5.1
1960 Male, age 74, unknown 4.8
2199 Male, age 80, right hemisphere 4.7
2059 Female, age 85, both hemispheres 4.0
Stria terminalis, bed nucleus
nTPM: 5.4
1974 Female, age 91, both hemispheres 6.0
2486 Female, age 94, both hemispheres 5.9
2201 Male, age 74, unknown 4.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 13.7
Samples: 246

Max nTPM: 34.4
Min nTPM: 6.3
Std nTPM: 4.2
Median nTPM: 13.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 34.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 29.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 28.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 27.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 27.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 24.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 23.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 23.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 22.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 21.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 21.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 21.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 21.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 20.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 20.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 20.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 20.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 20.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 20.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 19.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 19.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 19.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 19.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 19.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 19.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 19.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 18.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 18.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 18.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 18.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 18.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 18.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 18.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 17.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 17.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 17.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 17.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 17.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 17.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 17.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 17.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 17.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 17.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 16.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 16.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 16.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 16.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 16.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 16.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 16.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 16.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 16.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 16.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 16.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 16.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 16.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 16.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 16.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 16.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 16.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 16.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 15.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 15.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 15.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 15.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 15.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 15.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 15.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 15.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 15.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 15.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 15.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 15.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 15.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 15.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 15.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 14.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 14.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 14.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 14.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 14.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 14.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 14.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 14.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 14.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 14.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 14.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 14.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 14.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 14.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 14.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 14.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 14.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 14.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 13.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 13.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 13.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 13.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 13.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 13.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 13.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 13.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 13.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 13.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 13.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 13.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 13.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 13.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 13.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 13.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 13.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 13.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 13.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 13.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 13.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 13.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 13.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 13.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 13.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 13.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 12.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 12.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 12.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 12.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 12.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 12.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 12.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 12.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 12.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 12.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 12.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 12.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 12.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 12.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 12.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 12.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 12.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 12.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 12.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 12.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 12.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 12.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 12.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 12.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 12.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 12.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 12.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 11.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 11.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 11.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 11.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 11.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 11.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 11.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 11.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 11.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 11.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 11.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 11.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 11.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 11.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 11.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 11.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 11.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 11.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 11.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 10.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 10.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 10.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 10.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 10.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 10.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 10.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 10.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 10.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 10.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 10.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 10.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 10.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 10.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 10.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 10.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 10.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 10.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 10.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 10.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 9.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 9.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 9.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 9.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 9.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 9.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 9.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 9.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 9.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 9.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 9.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 9.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 9.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 9.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 9.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 9.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 9.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 9.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 9.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 9.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 9.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 8.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 8.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 8.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 8.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 8.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 8.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 8.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 8.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 8.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 8.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 8.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 8.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 8.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 8.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 8.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 7.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 7.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 7.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 7.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 6.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 6.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 6.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 6.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 13.0
Samples: 246

Max nTPM: 37.5
Min nTPM: 3.0
Std nTPM: 4.5
Median nTPM: 12.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 37.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 35.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 26.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 26.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 26.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 23.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 22.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 20.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 20.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 20.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 20.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 19.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 19.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 19.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 19.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 19.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 18.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 18.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 18.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 18.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 18.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 18.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 17.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 17.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 17.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 17.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 17.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 17.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 17.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 17.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 17.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 17.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 16.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 16.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 16.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 16.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 16.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 16.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 16.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 16.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 16.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 16.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 16.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 16.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 16.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 16.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 16.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 15.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 15.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 15.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 15.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 15.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 15.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 15.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 15.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 15.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 15.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 15.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 15.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 15.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 15.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 15.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 15.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 15.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 15.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 15.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 14.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 14.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 14.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 14.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 14.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 14.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 14.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 14.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 14.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 14.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 14.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 14.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 14.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 14.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 14.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 14.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 14.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 14.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 13.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 13.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 13.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 13.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 13.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 13.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 13.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 13.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 13.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 13.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 13.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 13.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 13.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 13.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 13.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 13.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 13.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 13.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 13.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 13.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 13.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 13.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 13.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 13.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 13.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 13.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 13.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 13.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 12.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 12.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 12.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 12.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 12.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 12.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 12.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 12.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 12.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 12.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 12.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 12.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 12.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 12.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 12.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 12.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 12.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 12.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 12.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 12.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 11.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 11.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 11.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 11.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 11.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 11.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 11.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 11.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 11.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 11.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 11.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 11.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 11.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 11.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 11.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 11.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 11.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 11.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 11.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 11.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 11.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 10.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 10.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 10.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 10.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 10.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 10.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 10.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 10.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 10.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 10.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 10.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 10.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 10.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 10.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 10.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 10.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 10.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 10.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 10.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 10.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 9.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 9.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 9.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 9.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 9.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 9.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 9.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 9.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 9.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 9.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 9.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 9.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 9.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 9.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 9.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 9.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 9.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 9.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 9.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 9.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 9.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 9.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 8.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 8.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 8.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 8.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 8.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 8.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 8.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 8.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 8.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 8.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 8.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 8.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 8.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 8.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 8.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 8.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 8.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 8.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 8.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 8.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 7.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 7.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 7.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 7.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 7.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 7.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 7.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 7.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 7.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 7.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 7.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 7.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 6.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 6.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 5.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 5.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 4.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 4.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 4.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 3.0
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Brain - Putamen (basal ganglia)
Average nTPM: 14.4
Samples: 205

Max nTPM: 28.7
Min nTPM: 5.5
Std nTPM: 4.2
Median nTPM: 14.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 28.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 27.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 26.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 26.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 25.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 24.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 24.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 24.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 23.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 23.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 22.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 21.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 21.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 21.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 21.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 21.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 21.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 20.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 20.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 20.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 20.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 20.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 20.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 19.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 19.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 19.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 19.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 19.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 18.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 18.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 18.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 18.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 18.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 18.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 18.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 18.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 17.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 17.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 17.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 17.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 17.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 17.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 17.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 17.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 17.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 17.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 16.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 16.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 16.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 16.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 16.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 16.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 16.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 16.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 16.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 16.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 16.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 16.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 16.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 15.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 15.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 15.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 15.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 15.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 15.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 15.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 15.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 15.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 15.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 15.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 15.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 15.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 15.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 15.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 15.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 15.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 15.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 15.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 15.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 15.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 15.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 15.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 15.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 14.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 14.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 14.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 14.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 14.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 14.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 14.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 14.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 14.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 14.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 14.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 14.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 14.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 14.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 14.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 14.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 14.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 14.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 14.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 14.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 13.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 13.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 13.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 13.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 13.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 13.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 13.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 13.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 13.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 13.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 13.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 13.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 13.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 13.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 13.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 12.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 12.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 12.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 12.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 12.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 12.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 12.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 12.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 12.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 12.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 12.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 12.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 12.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 12.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 12.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 12.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 11.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 11.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 11.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 11.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 11.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 11.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 11.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 11.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 11.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 11.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 11.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 11.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 11.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 11.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 11.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 11.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 11.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 10.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 10.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 10.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 10.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 10.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 10.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 10.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 10.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 10.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 10.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 10.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 10.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 10.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 10.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 10.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 10.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 10.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 9.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 9.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 9.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 9.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 9.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 9.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 9.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 8.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 8.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 7.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 7.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 7.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 6.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 6.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 6.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 18.2
FF:10164-103B2 76 years, female 18.2
Nucleus accumbens
Scaled Tags Per Million: 10.5
FF:10037-101F1 23-56 years, mixed 10.5
Putamen
Scaled Tags Per Million: 12.5
FF:10176-103C5 60 years, female 12.5
Globus pallidus
Scaled Tags Per Million: 26.3
FF:10175-103C4 60 years, female 32.1
FF:10161-103A8 76 years, female 20.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.0
Pig sample Sample description nTPM
Caudate
nTPM: 14.4
Samples: 4

Max nTPM: 15.8
Min nTPM: 13.3
Sample A Female 15.8
Sample B Female 13.3
Sample C Male 15.2
Sample D Male 13.3
Putamen
nTPM: 17.5
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.2
Sample A Female 20.2
Sample B Female 15.2
Sample C Male 17.2
Sample D Male 17.3
Septum
nTPM: 18.1
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.1
Sample A Female 19.9
Sample B Female 16.5
Sample C Male 16.1
Sample D Male 19.7
Ventral pallidum
nTPM: 15.9
Samples: 4

Max nTPM: 16.1
Min nTPM: 15.4
Sample A Female 16.0
Sample B Female 15.9
Sample C Male 15.4
Sample D Male 16.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 76.9
Samples: 4

Max nTPM: 82.4
Min nTPM: 70.1
Sample A Male 77.4
Sample B Male 82.4
Sample C Female 77.5
Sample D Female 70.1
Septum
nTPM: 95.4
Samples: 4

Max nTPM: 117.4
Min nTPM: 71.2
Sample A Male 71.2
Sample B Male 117.4
Sample C Female 96.4
Sample D Female 96.7
Ventral forebrain
nTPM: 66.6
Samples: 4

Max nTPM: 69.8
Min nTPM: 59.7
Sample A Male 68.0
Sample B Male 68.8
Sample C Female 59.7
Sample D Female 69.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
69549180 Antisense, RP_050118_03_A07, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
69549180 Antisense, RP_050118_03_A07, Mouse strain C57BL/6J (56 days, male) 0.0

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