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RETREG2
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:67.2 nTPM
HPA Brain:55.8 nTPM
GTEx:67.2 nTPM
FANTOM5:106.0 Scaled Tags Per Million
Pig:77.4 nTPM
Mouse:166.6 nTPM
Allen mouse:16.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011170Antibody HPA075910
Glial cells Not detectedHigh
Neuronal cells Not detectedHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 52.8
1781 Male, age 74, unknown 62.5
1857 Female, age 85, left hemisphere 59.5
2481 Female, age 94, left hemisphere 59.2
1854 Male, age 80, left hemisphere 53.1
2290 Female, age 72, unknown 52.3
2846 Female, age 79, unknown 50.0
2288 Male, age 75, left hemisphere 47.9
2289 Male, age 61, right hemisphere 37.8
Globus pallidus, externus
nTPM: 55.3
2772 Female, age 79, unknown 63.0
2395 Male, age 75, both hemispheres 58.5
2567 Female, age 72, unknown 53.9
1996 Male, age 80, right hemisphere 53.2
2646 Male, age 61, right hemisphere 47.8
Globus pallidus, internus
nTPM: 54.0
2483 Female, age 94, right hemisphere 65.2
2287 Male, age 75, right hemisphere 61.7
2778 Female, age 91, both hemispheres 54.0
1818 Male, age 74, unknown 53.0
2566 Female, age 72, unknown 50.9
2111 Female, age 85, right hemisphere 47.2
2037 Male, age 80, right hemisphere 46.0
Nucleus accumbens
nTPM: 55.8
1783 Male, age 74, unknown 69.0
1806 Female, age 85, left hemisphere 67.5
2824 Male, age 61, right hemisphere 58.5
2391 Female, age 94, left hemisphere 58.2
1856 Female, age 91, right hemisphere 53.4
2286 Male, age 75, left hemisphere 49.6
2732 Male, age 80, right hemisphere 47.6
2698 Female, age 72, unknown 42.7
Nucleus basalis of Meynert
nTPM: 45.4
2484 Female, age 94, left hemisphere 49.5
2569 Male, age 61, both hemispheres 45.9
2821 Male, age 75, both hemispheres 43.9
2393 Male, age 80, right hemisphere 42.1
Nucleus of the diagonal band
nTPM: 53.4
1812 Female, age 91, both hemispheres 61.2
2775 Male, age 80, right hemisphere 59.7
2029 Male, age 61, right hemisphere 54.6
2195 Female, age 85, both hemispheres 48.1
1979 Male, age 74, unknown 43.4
Putamen
nTPM: 54.0
2466 Female, age 79, unknown 70.9
1829 Male, age 74, unknown 55.1
1937 Female, age 91, right hemisphere 53.9
2647 Male, age 75, left hemisphere 52.1
1838 Male, age 80, right hemisphere 50.8
2482 Female, age 94, left hemisphere 50.3
2489 Female, age 72, unknown 44.9
Septal nuclei
nTPM: 54.4
2031 Female, age 72, unknown 71.6
1960 Male, age 74, unknown 66.7
2009 Female, age 91, both hemispheres 56.1
2394 Male, age 61, left hemisphere 53.8
2059 Female, age 85, both hemispheres 47.4
2629 Female, age 94, right hemisphere 46.4
2199 Male, age 80, right hemisphere 39.1
Stria terminalis, bed nucleus
nTPM: 50.4
1974 Female, age 91, both hemispheres 56.2
2486 Female, age 94, both hemispheres 50.0
2201 Male, age 74, unknown 45.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 64.5
Samples: 246

Max nTPM: 108.8
Min nTPM: 35.2
Std nTPM: 12.9
Median nTPM: 63.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 108.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 104.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 101.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 98.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 97.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 96.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 89.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 89.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 87.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 87.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 87.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 86.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 86.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 85.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 84.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 84.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 84.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 83.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 83.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 82.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 82.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 81.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 81.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 80.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 80.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 80.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 80.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 79.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 79.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 78.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 78.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 78.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 78.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 77.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 77.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 77.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 77.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 77.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 77.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 76.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 76.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 76.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 76.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 76.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 76.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 76.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 75.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 75.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 75.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 75.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 74.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 74.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 74.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 74.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 74.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 73.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 73.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 73.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 73.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 73.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 73.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 72.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 72.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 72.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 71.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 71.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 71.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 71.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 70.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 70.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 70.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 69.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 69.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 69.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 69.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 69.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 69.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 68.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 68.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 68.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 68.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 68.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 68.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 67.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 67.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 67.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 67.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 67.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 67.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 67.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 66.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 66.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 66.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 66.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 66.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 66.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 65.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 65.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 65.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 65.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 65.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 65.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 64.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 64.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 64.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 64.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 64.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 63.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 63.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 63.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 63.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 63.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 62.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 62.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 62.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 62.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 62.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 61.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 61.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 61.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 61.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 61.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 61.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 61.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 60.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 60.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 60.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 60.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 60.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 60.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 59.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 59.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 59.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 59.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 59.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 59.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 59.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 59.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 58.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 58.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 58.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 58.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 58.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 58.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 58.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 58.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 58.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 57.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 57.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 57.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 56.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 56.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 56.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 56.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 54.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 53.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 53.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 53.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 53.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 53.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 53.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 52.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 52.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 52.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 52.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 52.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 51.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 51.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 51.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 51.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 51.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 51.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 50.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 50.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 50.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 50.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 49.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 49.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 49.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 49.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 49.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 49.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 49.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 49.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 49.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 48.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 48.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 48.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 47.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 47.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 47.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 46.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 46.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 45.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 45.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 45.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 44.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 43.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 43.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 42.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 41.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 39.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 37.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 35.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 67.2
Samples: 246

Max nTPM: 109.4
Min nTPM: 29.4
Std nTPM: 13.0
Median nTPM: 67.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 109.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 108.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 99.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 98.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 97.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 94.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 94.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 94.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 93.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 93.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 93.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 93.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 87.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 87.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 86.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 86.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 86.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 85.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 84.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 84.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 83.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 83.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 83.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 83.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 81.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 81.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 81.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 81.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 80.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 80.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 79.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 79.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 79.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 79.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 79.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 79.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 79.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 79.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 79.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 79.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 79.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 78.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 78.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 78.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 78.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 78.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 77.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 77.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 77.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 77.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 77.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 77.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 77.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 77.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 77.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 77.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 76.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 76.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 76.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 76.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 76.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 76.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 76.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 76.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 76.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 76.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 76.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 75.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 75.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 75.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 75.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 75.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 74.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 74.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 74.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 73.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 73.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 73.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 73.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 73.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 73.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 73.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 73.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 73.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 72.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 72.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 72.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 72.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 72.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 72.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 72.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 71.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 71.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 71.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 71.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 71.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 70.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 70.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 70.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 70.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 70.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 70.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 70.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 69.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 69.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 69.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 69.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 69.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 69.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 68.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 68.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 68.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 68.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 68.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 68.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 68.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 68.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 68.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 68.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 67.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 67.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 67.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 67.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 67.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 67.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 67.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 66.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 66.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 66.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 66.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 66.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 65.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 65.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 65.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 65.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 65.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 64.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 64.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 64.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 64.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 64.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 64.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 64.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 64.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 64.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 63.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 63.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 63.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 63.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 63.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 63.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 63.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 62.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 62.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 62.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 62.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 62.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 62.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 62.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 61.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 61.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 61.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 61.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 61.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 61.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 60.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 60.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 60.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 60.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 60.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 59.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 59.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 59.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 59.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 59.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 59.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 59.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 59.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 59.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 58.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 58.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 58.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 58.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 58.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 57.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 57.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 56.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 56.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 56.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 56.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 55.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 55.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 55.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 55.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 54.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 54.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 54.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 54.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 53.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 53.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 53.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 53.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 53.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 53.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 53.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 53.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 52.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 52.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 52.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 52.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 52.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 51.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 51.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 51.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 51.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 51.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 50.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 50.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 49.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 49.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 49.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 49.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 49.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 48.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 48.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 48.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 48.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 48.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 47.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 46.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 46.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 45.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 44.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 44.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 43.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 42.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 42.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 39.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 29.4
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Brain - Putamen (basal ganglia)
Average nTPM: 66.3
Samples: 205

Max nTPM: 108.0
Min nTPM: 36.6
Std nTPM: 13.3
Median nTPM: 65.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 108.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 102.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 98.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 97.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 97.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 95.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 93.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 92.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 92.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 92.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 92.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 92.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 91.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 90.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 89.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 87.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 86.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 86.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 85.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 84.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 84.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 83.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 83.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 83.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 83.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 83.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 82.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 82.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 81.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 81.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 81.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 80.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 80.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 79.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 79.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 78.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 78.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 78.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 78.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 77.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 77.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 76.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 76.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 75.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 74.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 74.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 74.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 74.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 73.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 73.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 73.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 73.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 72.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 72.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 72.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 71.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 71.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 71.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 71.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 71.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 70.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 70.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 70.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 70.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 70.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 70.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 70.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 70.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 70.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 70.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 69.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 69.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 69.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 69.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 69.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 69.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 69.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 68.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 68.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 68.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 67.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 67.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 67.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 67.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 67.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 67.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 67.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 67.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 67.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 66.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 66.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 66.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 66.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 66.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 65.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 65.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 65.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 65.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 65.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 65.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 65.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 65.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 65.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 65.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 65.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 64.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 64.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 64.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 64.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 64.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 63.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 63.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 63.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 63.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 63.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 63.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 63.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 63.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 62.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 62.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 62.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 62.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 61.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 61.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 61.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 61.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 61.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 61.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 61.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 60.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 60.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 60.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 60.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 60.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 60.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 60.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 59.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 59.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 59.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 59.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 58.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 58.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 58.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 58.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 58.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 57.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 57.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 57.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 56.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 56.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 56.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 56.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 56.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 55.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 55.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 55.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 54.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 54.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 54.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 54.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 53.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 53.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 53.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 53.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 53.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 52.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 52.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 52.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 51.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 50.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 50.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 50.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 50.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 50.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 50.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 49.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 49.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 49.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 48.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 47.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 47.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 47.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 47.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 46.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 46.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 45.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 45.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 45.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 45.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 44.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 43.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 43.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 42.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 41.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 39.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 36.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 68.0
FF:10164-103B2 76 years, female 68.0
Nucleus accumbens
Scaled Tags Per Million: 106.0
FF:10037-101F1 23-56 years, mixed 106.0
Putamen
Scaled Tags Per Million: 85.9
FF:10176-103C5 60 years, female 85.9
Globus pallidus
Scaled Tags Per Million: 54.7
FF:10175-103C4 60 years, female 60.4
FF:10161-103A8 76 years, female 49.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.4
Pig sample Sample description nTPM
Caudate
nTPM: 77.4
Samples: 4

Max nTPM: 93.9
Min nTPM: 63.7
Sample A Female 63.7
Sample B Female 80.2
Sample C Male 93.9
Sample D Male 71.7
Putamen
nTPM: 77.1
Samples: 4

Max nTPM: 96.8
Min nTPM: 60.9
Sample A Female 60.9
Sample B Female 61.5
Sample C Male 96.8
Sample D Male 89.2
Septum
nTPM: 67.8
Samples: 4

Max nTPM: 85.4
Min nTPM: 57.8
Sample A Female 66.2
Sample B Female 61.9
Sample C Male 85.4
Sample D Male 57.8
Ventral pallidum
nTPM: 71.4
Samples: 4

Max nTPM: 90.8
Min nTPM: 61.7
Sample A Female 61.7
Sample B Female 65.8
Sample C Male 90.8
Sample D Male 67.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 166.6
Samples: 4

Max nTPM: 173.6
Min nTPM: 156.8
Sample A Male 162.8
Sample B Male 173.3
Sample C Female 156.8
Sample D Female 173.6
Septum
nTPM: 150.9
Samples: 4

Max nTPM: 156.9
Min nTPM: 142.3
Sample A Male 156.1
Sample B Male 156.9
Sample C Female 148.3
Sample D Female 142.3
Ventral forebrain
nTPM: 153.7
Samples: 4

Max nTPM: 164.9
Min nTPM: 138.1
Sample A Male 138.1
Sample B Male 162.4
Sample C Female 164.9
Sample D Female 149.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.9
386010 Antisense, RP_040625_01_H10, Mouse strain C57BL/6J (56 days, male) 16.9
Pallidum
Expression energy: 13.8
386010 Antisense, RP_040625_01_H10, Mouse strain C57BL/6J (56 days, male) 13.8

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