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IQSEC1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:44.3 nTPM
HPA Brain:162.4 nTPM
GTEx:44.3 nTPM
FANTOM5:136.1 Scaled Tags Per Million
Pig:45.4 nTPM
Mouse:59.0 nTPM
Allen mouse:4.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038143Antibody HPA038144
Glial cells Not detectedLow
Neuronal cells Not detectedHigh




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

162.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 117.4
2288 Male, age 75, left hemisphere 131.1
2846 Female, age 79, unknown 130.8
2290 Female, age 72, unknown 126.3
1781 Male, age 74, unknown 123.1
2289 Male, age 61, right hemisphere 122.9
1854 Male, age 80, left hemisphere 105.5
2481 Female, age 94, left hemisphere 103.3
1857 Female, age 85, left hemisphere 96.3
Globus pallidus, externus
nTPM: 103.0
2772 Female, age 79, unknown 124.5
2646 Male, age 61, right hemisphere 114.7
2567 Female, age 72, unknown 111.4
1996 Male, age 80, right hemisphere 82.6
2395 Male, age 75, both hemispheres 81.9
Globus pallidus, internus
nTPM: 92.1
1818 Male, age 74, unknown 104.2
2483 Female, age 94, right hemisphere 99.9
2566 Female, age 72, unknown 94.9
2111 Female, age 85, right hemisphere 92.1
2037 Male, age 80, right hemisphere 87.9
2287 Male, age 75, right hemisphere 86.3
2778 Female, age 91, both hemispheres 79.5
Nucleus accumbens
nTPM: 100.9
2286 Male, age 75, left hemisphere 118.3
1783 Male, age 74, unknown 116.3
1856 Female, age 91, right hemisphere 111.3
2824 Male, age 61, right hemisphere 103.5
1806 Female, age 85, left hemisphere 95.1
2698 Female, age 72, unknown 92.1
2732 Male, age 80, right hemisphere 90.3
2391 Female, age 94, left hemisphere 80.7
Nucleus basalis of Meynert
nTPM: 124.0
2484 Female, age 94, left hemisphere 145.6
2569 Male, age 61, both hemispheres 119.2
2821 Male, age 75, both hemispheres 118.7
2393 Male, age 80, right hemisphere 112.5
Nucleus of the diagonal band
nTPM: 160.6
2775 Male, age 80, right hemisphere 198.5
2195 Female, age 85, both hemispheres 181.6
2029 Male, age 61, right hemisphere 178.9
1812 Female, age 91, both hemispheres 141.6
1979 Male, age 74, unknown 102.5
Putamen
nTPM: 140.1
2647 Male, age 75, left hemisphere 182.6
2489 Female, age 72, unknown 173.6
2466 Female, age 79, unknown 149.0
1829 Male, age 74, unknown 138.5
1838 Male, age 80, right hemisphere 114.8
1937 Female, age 91, right hemisphere 111.5
2482 Female, age 94, left hemisphere 110.8
Septal nuclei
nTPM: 153.1
1960 Male, age 74, unknown 237.6
2059 Female, age 85, both hemispheres 176.1
2031 Female, age 72, unknown 171.0
2629 Female, age 94, right hemisphere 155.9
2009 Female, age 91, both hemispheres 138.5
2394 Male, age 61, left hemisphere 109.4
2199 Male, age 80, right hemisphere 83.2
Stria terminalis, bed nucleus
nTPM: 162.4
1974 Female, age 91, both hemispheres 190.6
2486 Female, age 94, both hemispheres 173.8
2201 Male, age 74, unknown 122.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 42.2
Samples: 246

Max nTPM: 113.1
Min nTPM: 20.1
Std nTPM: 12.8
Median nTPM: 41.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 113.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 79.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 74.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 73.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 66.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 64.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 64.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 63.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 63.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 63.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 63.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 63.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 63.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 62.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 60.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 60.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 59.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 59.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 58.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 58.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 58.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 57.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 57.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 57.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 57.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 56.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 55.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 55.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 55.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 55.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 54.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 53.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 53.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 53.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 53.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 53.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 52.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 52.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 52.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 52.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 52.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 52.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 52.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 51.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 51.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 51.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 51.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 51.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 51.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 51.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 50.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 50.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 50.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 50.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 49.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 49.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 48.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 48.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 48.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 47.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 47.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 47.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 47.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 47.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 47.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 47.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 47.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 46.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 46.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 46.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 46.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 46.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 46.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 45.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 45.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 45.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 45.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 45.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 45.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 45.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 44.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 44.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 44.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 44.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 44.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 44.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 44.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 43.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 43.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 43.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 42.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 42.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 42.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 42.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 41.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 41.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 41.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 41.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 41.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 41.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 41.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 40.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 40.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 40.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 40.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 39.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 39.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 39.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 39.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 39.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 39.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 39.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 39.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 39.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 38.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 38.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 38.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 38.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 38.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 38.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 38.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 38.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 37.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 37.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 37.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 37.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 36.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 36.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 36.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 35.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 35.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 34.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 34.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 34.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 34.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 34.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 34.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 34.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 34.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 33.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 33.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 33.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 33.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 32.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 32.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 32.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 32.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 32.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 31.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 31.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 31.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 31.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 31.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 31.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 31.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 31.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 31.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 30.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 30.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 30.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 30.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 30.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 30.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 30.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 29.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 29.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 29.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 29.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 29.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 29.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 28.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 28.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 28.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 28.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 28.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 28.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 27.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 27.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 27.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 27.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 27.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 27.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 26.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 26.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 26.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 26.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 26.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 26.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 25.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 25.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 25.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 25.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 24.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 24.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 24.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 23.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 23.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 23.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 22.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 22.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 21.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 21.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 20.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 20.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 20.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 41.8
Samples: 246

Max nTPM: 72.7
Min nTPM: 16.4
Std nTPM: 10.1
Median nTPM: 42.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 72.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 67.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 67.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 63.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 61.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 61.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 61.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 60.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 60.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 60.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 59.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 59.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 58.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 58.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 58.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 56.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 56.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 55.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 55.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 54.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 54.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 54.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 54.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 53.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 53.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 53.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 52.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 52.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 52.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 52.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 51.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 51.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 51.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 51.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 51.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 51.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 51.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 50.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 50.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 50.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 50.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 50.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 50.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 50.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 50.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 50.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 50.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 50.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 50.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 50.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 50.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 49.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 49.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 49.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 49.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 49.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 49.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 49.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 48.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 48.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 48.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 48.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 48.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 48.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 48.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 48.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 48.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 47.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 47.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 47.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 47.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 47.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 47.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 46.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 46.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 46.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 46.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 46.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 46.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 46.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 46.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 46.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 45.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 45.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 45.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 45.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 45.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 45.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 45.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 45.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 45.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 45.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 45.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 44.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 44.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 44.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 44.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 44.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 44.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 44.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 44.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 44.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 44.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 43.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 43.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 43.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 43.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 43.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 43.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 43.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 43.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 43.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 42.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 42.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 42.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 42.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 42.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 42.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 42.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 41.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 41.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 41.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 41.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 41.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 41.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 41.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 41.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 41.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 41.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 41.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 41.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 41.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 40.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 40.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 40.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 40.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 40.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 40.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 40.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 40.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 39.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 39.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 39.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 39.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 39.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 39.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 39.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 39.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 39.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 38.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 38.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 38.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 38.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 37.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 37.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 37.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 37.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 37.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 37.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 37.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 37.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 36.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 36.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 36.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 36.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 36.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 36.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 36.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 36.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 36.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 36.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 35.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 35.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 35.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 35.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 34.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 34.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 34.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 34.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 34.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 33.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 33.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 33.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 33.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 33.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 33.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 32.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 32.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 32.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 32.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 32.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 32.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 31.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 31.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 31.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 31.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 31.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 31.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 31.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 31.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 31.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 30.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 30.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 29.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 29.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 28.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 28.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 28.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 28.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 27.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 27.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 27.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 27.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 27.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 27.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 27.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 26.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 26.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 26.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 25.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 25.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 25.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 25.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 25.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 24.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 24.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 24.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 24.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 23.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 22.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 21.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 21.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 20.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 18.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 17.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 16.4
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Brain - Putamen (basal ganglia)
Average nTPM: 44.3
Samples: 205

Max nTPM: 98.3
Min nTPM: 18.2
Std nTPM: 13.7
Median nTPM: 44.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 98.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 88.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 85.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 73.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 72.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 70.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 69.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 68.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 67.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 67.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 66.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 66.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 65.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 65.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 65.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 63.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 63.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 63.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 62.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 62.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 61.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 61.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 61.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 60.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 60.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 59.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 59.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 58.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 57.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 57.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 56.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 56.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 56.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 56.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 56.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 56.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 55.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 55.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 55.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 55.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 54.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 54.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 53.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 53.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 52.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 52.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 52.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 52.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 52.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 52.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 52.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 51.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 51.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 51.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 50.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 50.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 50.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 50.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 49.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 49.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 49.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 49.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 49.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 48.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 48.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 48.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 48.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 48.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 48.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 48.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 48.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 47.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 47.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 47.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 47.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 47.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 47.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 47.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 47.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 46.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 46.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 46.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 46.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 46.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 46.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 45.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 45.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 45.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 45.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 45.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 45.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 44.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 44.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 44.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 44.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 44.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 43.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 43.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 43.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 43.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 43.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 43.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 43.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 42.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 42.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 42.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 42.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 41.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 41.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 41.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 41.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 40.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 40.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 40.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 39.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 39.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 39.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 39.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 39.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 38.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 38.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 38.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 38.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 38.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 37.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 37.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 37.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 37.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 36.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 36.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 36.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 36.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 35.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 35.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 34.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 34.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 34.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 34.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 34.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 34.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 34.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 33.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 33.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 32.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 32.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 31.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 31.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 31.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 31.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 30.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 30.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 29.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 29.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 29.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 28.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 28.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 28.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 27.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 27.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 27.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 27.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 26.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 26.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 26.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 26.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 26.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 25.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 25.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 25.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 25.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 25.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 25.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 25.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 24.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 24.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 24.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 23.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 23.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 23.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 22.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 21.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 19.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 18.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

136.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 83.1
FF:10164-103B2 76 years, female 83.1
Nucleus accumbens
Scaled Tags Per Million: 136.1
FF:10037-101F1 23-56 years, mixed 136.1
Putamen
Scaled Tags Per Million: 87.4
FF:10176-103C5 60 years, female 87.4
Globus pallidus
Scaled Tags Per Million: 55.1
FF:10161-103A8 76 years, female 58.4
FF:10175-103C4 60 years, female 51.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.4
Pig sample Sample description nTPM
Caudate
nTPM: 44.7
Samples: 4

Max nTPM: 51.1
Min nTPM: 36.5
Sample A Female 36.5
Sample B Female 47.6
Sample C Male 51.1
Sample D Male 43.7
Putamen
nTPM: 45.5
Samples: 4

Max nTPM: 56.3
Min nTPM: 35.2
Sample A Female 35.2
Sample B Female 39.7
Sample C Male 56.3
Sample D Male 50.7
Septum
nTPM: 40.2
Samples: 4

Max nTPM: 50.7
Min nTPM: 30.5
Sample A Female 40.4
Sample B Female 39.3
Sample C Male 50.7
Sample D Male 30.5
Ventral pallidum
nTPM: 44.3
Samples: 4

Max nTPM: 64.1
Min nTPM: 35.8
Sample A Female 39.7
Sample B Female 35.8
Sample C Male 64.1
Sample D Male 37.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 59.0
Samples: 4

Max nTPM: 70.5
Min nTPM: 49.1
Sample A Male 61.4
Sample B Male 70.5
Sample C Female 49.1
Sample D Female 54.9
Septum
nTPM: 55.8
Samples: 4

Max nTPM: 66.0
Min nTPM: 46.0
Sample A Male 66.0
Sample B Male 46.0
Sample C Female 55.8
Sample D Female 55.2
Ventral forebrain
nTPM: 57.6
Samples: 4

Max nTPM: 63.8
Min nTPM: 53.9
Sample A Male 55.6
Sample B Male 63.8
Sample C Female 53.9
Sample D Female 57.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.1
70946251 Antisense, RP_050426_04_G06, Mouse strain C57BL/6J (56 days, male) 3.5
77332673 Antisense, RP_070116_02_B04, Mouse strain C57BL/6J (56 days, male) 2.7
Pallidum
Expression energy: 4.2
70946251 Antisense, RP_050426_04_G06, Mouse strain C57BL/6J (56 days, male) 4.5
77332673 Antisense, RP_070116_02_B04, Mouse strain C57BL/6J (56 days, male) 4.0

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