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RPL32
HPA
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:960.9 nTPM
FANTOM5:33.7 Scaled Tags Per Million
Pig:155.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047501Antibody HPA051994
Glial cells Not detectedNot detected
Neuronal cells LowMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

960.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 960.9
Samples: 246

Max nTPM: 2802.0
Min nTPM: 447.7
Std nTPM: 299.6
Median nTPM: 920.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2802.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2299.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1945.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1893.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1880.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1847.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1779.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1754.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1742.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1691.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1661.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1536.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1525.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1501.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1429.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1376.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1371.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1370.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1363.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1339.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1323.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1316.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1312.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1295.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1269.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1260.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1257.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1254.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1248.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1242.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1212.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1210.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1205.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1205.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1201.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1191.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1190.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1183.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1177.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1167.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1155.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1151.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1148.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1139.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1118.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1114.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1114.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1113.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1092.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1090.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1088.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1087.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1086.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1081.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1076.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1075.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1074.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1074.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1074.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1072.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1070.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1069.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1068.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1065.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1064.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1062.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1060.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1059.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1056.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1050.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1041.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1039.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1038.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1031.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1031.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1030.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1024.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1020.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1020.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1020.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1013.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1012.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1007.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1004.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1004.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1001.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 995.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 993.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 991.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 989.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 981.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 981.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 977.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 972.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 971.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 968.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 965.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 964.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 963.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 959.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 957.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 957.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 957.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 951.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 950.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 949.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 945.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 945.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 943.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 943.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 942.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 938.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 937.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 935.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 935.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 930.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 929.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 926.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 925.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 925.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 925.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 925.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 922.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 919.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 914.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 913.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 912.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 909.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 904.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 903.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 902.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 901.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 899.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 894.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 893.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 893.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 891.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 889.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 884.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 883.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 882.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 876.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 874.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 872.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 871.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 856.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 852.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 851.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 850.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 849.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 847.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 847.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 840.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 834.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 834.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 833.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 832.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 831.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 831.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 827.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 823.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 822.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 822.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 821.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 817.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 816.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 816.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 813.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 806.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 806.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 805.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 801.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 797.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 794.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 792.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 791.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 791.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 785.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 780.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 776.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 775.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 773.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 772.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 771.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 765.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 761.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 760.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 759.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 756.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 754.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 752.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 748.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 745.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 741.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 741.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 740.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 739.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 736.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 733.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 729.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 725.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 724.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 719.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 719.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 717.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 716.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 713.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 712.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 711.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 708.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 708.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 704.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 702.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 702.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 698.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 690.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 683.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 675.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 674.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 673.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 672.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 672.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 671.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 663.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 660.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 657.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 650.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 646.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 643.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 636.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 629.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 615.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 614.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 613.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 605.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 601.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 597.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 595.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 592.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 579.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 546.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 541.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 539.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 533.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 517.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 447.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

33.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 33.7
FF:10164-103B2 76 years, female 33.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.4
Pig sample Sample description nTPM
Caudate
nTPM: 155.4
Samples: 4

Max nTPM: 170.3
Min nTPM: 133.6
Sample A Female 155.4
Sample B Female 162.1
Sample C Male 170.3
Sample D Male 133.6

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