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PHLDB2
HPA
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  • PHLDB2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PHLDB2
Synonyms FLJ21791, LL5b, LL5beta
Gene descriptioni

Full gene name according to HGNC.

Pleckstrin homology like domain family B member 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q13.2
Chromosome location (bp) 111732497 - 111976517
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000144824 (version 109)
Entrez gene 90102
HGNC HGNC:29573
UniProt Q86SQ0 (UniProt - Evidence at protein level)
neXtProt NX_Q86SQ0
GeneCards PHLDB2
Antibodypedia PHLDB2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Seems to be involved in the assembly of the postsynaptic apparatus. May play a role in acetyl-choline receptor (AChR) aggregation in the postsynaptic membrane (By similarity).... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables cadherin binding activity. Involved in several processes, including negative regulation of focal adhesion assembly; regulation of cytoskeleton organization; and regulation of embryonic development. Located in several cellular components, including basal cortex; cell leading edge; and intermediate filament cytoskeleton. Colocalizes with focal adhesion. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PHLDB2-201
ENSP00000377500
ENST00000393923
Q86SQ0
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0010470 [regulation of gastrulation]
GO:0010717 [regulation of epithelial to mesenchymal transition]
GO:0016020 [membrane]
GO:0031252 [cell leading edge]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045180 [basal cortex]
GO:0045184 [establishment of protein localization]
GO:0045296 [cadherin binding]
GO:0051497 [negative regulation of stress fiber assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0070507 [regulation of microtubule cytoskeleton organization]
GO:1903690 [negative regulation of wound healing, spreading of epidermal cells]
GO:1904261 [positive regulation of basement membrane assembly involved in embryonic body morphogenesis]
Show all
1237 aa
140 kDa
No 0
PHLDB2-202
ENSP00000377502
ENST00000393925
Q86SQ0
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0010470 [regulation of gastrulation]
GO:0010717 [regulation of epithelial to mesenchymal transition]
GO:0016020 [membrane]
GO:0031252 [cell leading edge]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045180 [basal cortex]
GO:0045184 [establishment of protein localization]
GO:0045296 [cadherin binding]
GO:0051497 [negative regulation of stress fiber assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0070507 [regulation of microtubule cytoskeleton organization]
GO:1903690 [negative regulation of wound healing, spreading of epidermal cells]
GO:1904261 [positive regulation of basement membrane assembly involved in embryonic body morphogenesis]
Show all
1253 aa
142.2 kDa
No 0
PHLDB2-203
ENSP00000405292
ENST00000412622
Q86SQ0
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0010470 [regulation of gastrulation]
GO:0010717 [regulation of epithelial to mesenchymal transition]
GO:0016020 [membrane]
GO:0031252 [cell leading edge]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045180 [basal cortex]
GO:0045184 [establishment of protein localization]
GO:0045296 [cadherin binding]
GO:0051497 [negative regulation of stress fiber assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0070507 [regulation of microtubule cytoskeleton organization]
GO:1903690 [negative regulation of wound healing, spreading of epidermal cells]
GO:1904261 [positive regulation of basement membrane assembly involved in embryonic body morphogenesis]
Show all
1210 aa
136.9 kDa
No 0
PHLDB2-204
ENSP00000405405
ENST00000431670
Q86SQ0
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0010470 [regulation of gastrulation]
GO:0010717 [regulation of epithelial to mesenchymal transition]
GO:0016020 [membrane]
GO:0016477 [cell migration]
GO:0030010 [establishment of cell polarity]
GO:0031252 [cell leading edge]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045180 [basal cortex]
GO:0045184 [establishment of protein localization]
GO:0045296 [cadherin binding]
GO:0051497 [negative regulation of stress fiber assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0070507 [regulation of microtubule cytoskeleton organization]
GO:1903690 [negative regulation of wound healing, spreading of epidermal cells]
GO:1904261 [positive regulation of basement membrane assembly involved in embryonic body morphogenesis]
Show all
1253 aa
142.2 kDa
No 0
PHLDB2-207
ENSP00000418198
ENST00000477695
G5E9V3
[Direct mapping] Pleckstrin homology-like domain family B member 2; Pleckstrin homology-like domain, family B, member 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0045111 [intermediate filament cytoskeleton]
Show all
581 aa
64.2 kDa
No 0
PHLDB2-209
ENSP00000491559
ENST00000478733
A0A1W2PQ63
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
741 aa
84 kDa
No 0
PHLDB2-210
ENSP00000417497
ENST00000478922
E9PDY7
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0016020 [membrane]
GO:0045111 [intermediate filament cytoskeleton]
Show all
519 aa
56.9 kDa
No 2
PHLDB2-211
ENSP00000418319
ENST00000481953
Q86SQ0
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000226 [microtubule cytoskeleton organization]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0010470 [regulation of gastrulation]
GO:0010717 [regulation of epithelial to mesenchymal transition]
GO:0016020 [membrane]
GO:0031252 [cell leading edge]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045180 [basal cortex]
GO:0045184 [establishment of protein localization]
GO:0045296 [cadherin binding]
GO:0051497 [negative regulation of stress fiber assembly]
GO:0051895 [negative regulation of focal adhesion assembly]
GO:0070507 [regulation of microtubule cytoskeleton organization]
GO:1903690 [negative regulation of wound healing, spreading of epidermal cells]
GO:1904261 [positive regulation of basement membrane assembly involved in embryonic body morphogenesis]
Show all
1210 aa
136.9 kDa
No 0
PHLDB2-214
ENSP00000420303
ENST00000495180
E9PGF6
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
744 aa
86.6 kDa
No 0
PHLDB2-215
ENSP00000418296
ENST00000498699
E9PFQ4
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0045111 [intermediate filament cytoskeleton]
Show all
1115 aa
125.5 kDa
No 0
PHLDB2-216
ENSP00000492652
ENST00000638331
A0A1W2PRT1
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
418 aa
48.1 kDa
No 0
PHLDB2-218
ENSP00000492282
ENST00000640905
A0A1W2PRJ2
[Direct mapping] Pleckstrin homology-like domain family B member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
125 aa
13.6 kDa
No 0

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