HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:44.1 nTPM
HPA Brain:35.9 nTPM
GTEx:44.1 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:81.4 nTPM
Mouse:38.9 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040471Antibody CAB037260
Glial cells MediumNot detected
Neuronal cells -Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 35.9
Sample id Sample description nTPM
Hippocampus
nTPM: 32.9
2529 Female, age 94, left hemisphere 37.5
1898 Male, age 80, left hemisphere 36.5
2621 Female, age 67, right hemisphere 34.2
1855 Male, age 76, left hemisphere 32.0
1911 Female, age 85, right hemisphere 30.7
2148 Female, age 91, left hemisphere 26.5
Dentate gyrus
nTPM: 30.2
2010 Male, age 76, both hemispheres 34.6
2530 Female, age 94, left hemisphere 34.3
2246 Female, age 85, both hemispheres 30.4
2528 Male, age 74, both hemispheres 28.7
1927 Female, age 91, both hemispheres 27.6
2531 Female, age 67, both hemispheres 25.8
Entorhinal gyrus
nTPM: 31.8
2117 Female, age 91, right hemisphere 38.9
1938 Female, age 85, left hemisphere 33.1
2764 Male, age 80, right hemisphere 33.1
1787 Male, age 76, left hemisphere 31.9
2686 Male, age 75, right hemisphere 29.8
2613 Female, age 94, left hemisphere 24.1
Hippocampus, CA1
nTPM: 30.3
2749 Male, age 80, left hemisphere 35.5
2527 Male, age 74, both hemispheres 32.8
1873 Female, age 85, both hemispheres 30.8
2045 Male, age 76, both hemispheres 26.5
2082 Female, age 91, right hemisphere 26.1
Hippocampus, CA2
nTPM: 31.5
2249 Male, age 74, both hemispheres 35.5
1892 Male, age 76, both hemispheres 34.3
1963 Male, age 80, left hemisphere 32.9
2437 Female, age 94, left hemisphere 30.3
1940 Female, age 85, left hemisphere 28.6
2113 Female, age 91, right hemisphere 27.7
Hippocampus, CA3
nTPM: 29.6
1867 Male, age 76, both hemispheres 35.9
1891 Female, age 85, both hemispheres 35.6
2436 Male, age 74, both hemispheres 30.8
2137 Male, age 80, left hemisphere 30.3
2620 Female, age 94, left hemisphere 24.0
2861 Female, age 67, both hemispheres 21.2
Parahippocampal cortex
nTPM: 30.2
2018 Male, age 76, both hemispheres 33.7
2532 Female, age 72, left hemisphere 33.5
1990 Female, age 91, right hemisphere 32.8
2692 Male, age 74, both hemispheres 32.8
1850 Male, age 80, both hemispheres 32.0
2245 Female, age 91, both hemispheres 31.1
1933 Female, age 85, both hemispheres 29.1
2250 Female, age 67, right hemisphere 28.6
2693 Female, age 94, both hemispheres 24.1
2622 Female, age 67, right hemisphere 23.9
Perirhinal gyrus
nTPM: 28.4
1794 Male, age 80, right hemisphere 30.0
1841 Female, age 85, right hemisphere 29.0
2848 Male, age 76, right hemisphere 28.6
1847 Female, age 91, left hemisphere 27.9
2521 Female, age 94, right hemisphere 26.7
Subiculum
nTPM: 35.9
2042 Male, age 76, both hemispheres 42.1
1901 Male, age 80, both hemispheres 38.0
2438 Female, age 94, left hemisphere 36.3
1977 Female, age 85, both hemispheres 34.9
2619 Male, age 74, both hemispheres 34.3
2729 Female, age 91, right hemisphere 29.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 44.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.1
Samples: 197

Max nTPM: 89.3
Min nTPM: 24.3
Std nTPM: 11.3
Median nTPM: 43.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 89.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 76.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 74.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 72.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 71.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 71.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 69.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 69.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 69.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 66.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 66.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.9
FF:10153-102I9 76 years, female 71.3
FF:10169-103B7 60 years, female 70.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 81.4
Pig sample Sample description nTPM
Subiculum
nTPM: 55.0
Samples: 4

Max nTPM: 68.0
Min nTPM: 49.3
Sample A Female 68.0
Sample B Female 52.8
Sample C Male 49.3
Sample D Male 50.0
Dorsal hippocampus
nTPM: 81.5
Samples: 4

Max nTPM: 113.2
Min nTPM: 54.4
Sample A Female 113.2
Sample B Female 69.7
Sample C Male 88.5
Sample D Male 54.4
Entorhinal cortex
nTPM: 54.8
Samples: 4

Max nTPM: 65.1
Min nTPM: 47.6
Sample A Female 53.2
Sample B Female 65.1
Sample C Male 53.3
Sample D Male 47.6
Ventral hippocampus
nTPM: 63.2
Samples: 4

Max nTPM: 75.8
Min nTPM: 50.4
Sample A Female 75.8
Sample B Female 50.4
Sample C Male 60.1
Sample D Male 66.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 38.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 39.4
Min nTPM: 35.3
Sample A Male 35.4
Sample B Male 39.4
Sample C Female 38.1
Sample D Female 35.3
Hippocampal formation
nTPM: 38.9
Samples: 4

Max nTPM: 42.8
Min nTPM: 36.1
Sample A Male 42.8
Sample B Male 38.2
Sample C Female 38.6
Sample D Female 36.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
70445592 Antisense, RP_050614_04_B07, Mouse strain C57BL/6J (56 days, male) 4.1
74988519 Antisense, RP_060315_05_E07, Mouse strain C57BL/6J (56 days, male) 1.4

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