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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
44.4
nTPM
HPA Brain:
38.1
nTPM
GTEx:
44.4
nTPM
FANTOM5:
24.4
Scaled Tags Per Million
Pig:
13.8
nTPM
SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.1
Sample id
Sample description
nTPM
Cervical spinal cord, central gray nTPM: 34.3
2565
Male, age 75, midline
36.5
1981
Female, age 72, midline
36.4
2816
Male, age 47, midline
35.3
2194
Female, age 79, both hemispheres
32.2
2048
Male, age 55, midline
31.1
Cervical spinal cord, dorsal horn nTPM: 34.4
2173
Female, age 72, unknown
42.6
2296
Male, age 66, both hemispheres
40.6
2721
Male, age 90, both hemispheres
33.2
2069
Male, age 47, both hemispheres
31.5
1877
Male, age 55, unknown
30.3
2297
Male, age 75, both hemispheres
28.6
Cervical spinal cord, ventral horn nTPM: 38.1
2098
Female, age 72, unknown
42.5
2480
Male, age 75, both hemispheres
42.2
2295
Male, age 66, both hemispheres
41.0
2809
Male, age 90, both hemispheres
38.2
2820
Female, age 79, both hemispheres
35.8
2068
Male, age 55, unknown
28.6
SPINAL CORD - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
44.4
GTEx sample id
Sample description
nTPM
Brain - Spinal cord (cervical c-1) Average nTPM: 44.4
Samples: 159
Max nTPM: 77.8
Min nTPM: 19.4
Std nTPM: 12.5
Median nTPM: 43.3
GTEX-148VJ-0011-R9b-SM-5SI77
70-79 years, male
77.8
GTEX-1GTWX-0011-R9a-SM-ADEH4
60-69 years, male
72.8
GTEX-1I1CD-0011-R9a-SM-CMKHB
60-69 years, female
71.7
GTEX-1CAV2-0011-R9b-SM-9WG5M
40-49 years, female
70.3
GTEX-13PLJ-0011-R9b-SM-5O9DV
60-69 years, female
68.6
GTEX-13N1W-0011-R9b-SM-5MR4R
70-79 years, male
67.7
GTEX-1HBPH-0011-R9a-SM-CMKH3
40-49 years, female
67.6
GTEX-1I1GS-0011-R9b-SM-CMKHF
60-69 years, male
67.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP
50-59 years, male
63.6
GTEX-131XW-0011-R9a-SM-5N9EO
50-59 years, female
63.5
GTEX-145LU-0011-R9b-SM-5SI66
50-59 years, male
63.5
GTEX-13FTY-0011-R9b-SM-5KM2U
40-49 years, female
63.3
GTEX-16Z82-0011-R9a-SM-7DUFA
60-69 years, male
63.0
GTEX-1IGQW-0011-R9b-SM-D4P25
60-69 years, male
62.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF
60-69 years, female
62.9
GTEX-1IDJH-0011-R9a-SM-ADEIN
70-79 years, male
61.8
GTEX-1J8EW-0011-R9b-SM-D4P2F
60-69 years, female
60.2
GTEX-139T4-0011-R9b-SM-5HL6S
50-59 years, female
60.1
GTEX-139UW-0011-R9b-SM-5LZYT
60-69 years, male
59.9
GTEX-1GF9V-0011-R9a-SM-CL53K
60-69 years, male
59.9
GTEX-14PJM-0011-R9b-SM-6EU35
50-59 years, female
59.8
GTEX-1EKGG-0011-R9a-SM-CMKFV
60-69 years, male
59.0
GTEX-14E6C-0011-R9a-SM-6EU33
40-49 years, male
58.4
GTEX-1HBPI-0011-R9b-SM-ARL76
50-59 years, male
58.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ
60-69 years, male
58.2
GTEX-WL46-0011-R9A-SM-3MJFP
50-59 years, male
57.3
GTEX-YJ89-0011-R9a-SM-4SOK7
60-69 years, male
57.3
GTEX-1F88F-0011-R9b-SM-9WG7L
60-69 years, female
57.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3
60-69 years, male
56.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L
70-79 years, female
56.8
GTEX-17EVQ-0011-R9b-SM-79OJY
70-79 years, male
55.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ
50-59 years, male
55.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6
40-49 years, female
55.2
GTEX-147GR-0011-R9a-SM-5S2UY
60-69 years, male
54.7
GTEX-13OVL-0011-R9a-SM-5P9GX
50-59 years, male
54.3
GTEX-1IY9M-0011-R9b-SM-D3L8J
60-69 years, male
54.2
GTEX-ZVZQ-0011-R9a-SM-51MRH
60-69 years, female
54.1
GTEX-1GN1U-0011-R9b-SM-CMKFW
50-59 years, female
53.9
GTEX-14ABY-0011-R9a-SM-5PNZK
50-59 years, male
53.1
GTEX-14BIN-0011-R9a-SM-5SI76
50-59 years, female
52.7
GTEX-1KANB-0011-R9b-SM-EZ6MO
50-59 years, male
52.7
GTEX-11ZVC-0011-R9a-SM-57WC5
50-59 years, female
52.5
GTEX-14E7W-0011-R9a-SM-62LE6
70-79 years, male
52.5
GTEX-1C6VS-0011-R9b-SM-9WG5W
60-69 years, male
52.3
GTEX-1F6I4-0011-R9a-SM-CMKFU
60-69 years, male
52.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY
60-69 years, male
52.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO
70-79 years, male
51.4
GTEX-13PVQ-0011-R9b-SM-5LU3B
50-59 years, male
51.2
GTEX-1JMLX-0011-R9a-SM-EYYXM
50-59 years, male
51.0
GTEX-14PJO-0011-R9b-SM-62LE9
60-69 years, male
50.8
GTEX-1HGF4-0011-R9a-SM-ADEH9
60-69 years, male
50.6
GTEX-1LSNL-0011-R9b-SM-EYYWK
50-59 years, male
50.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A
40-49 years, male
49.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1
50-59 years, female
49.8
GTEX-1A32A-0011-R9b-SM-7MGXD
50-59 years, female
49.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z
40-49 years, male
48.7
GTEX-11ONC-0011-R9b-SM-5NQ8J
60-69 years, male
48.6
GTEX-18464-0011-R9a-SM-731BK
50-59 years, male
48.6
GTEX-11ZTS-0011-R9b-SM-DO93Q
60-69 years, female
48.6
GTEX-QVUS-0011-R9A-SM-3GIJA
60-69 years, female
48.5
GTEX-1A8G7-0011-R9b-SM-7IGQH
60-69 years, male
48.2
GTEX-T6MN-0011-R9A-SM-32QOZ
50-59 years, male
47.8
GTEX-1GZHY-0011-R9a-SM-9WG5R
50-59 years, female
47.8
GTEX-13JUV-0011-R9a-SM-5LZX3
40-49 years, female
47.3
GTEX-13FXS-0011-R9a-SM-5K7UI
50-59 years, male
46.7
GTEX-13S7M-0011-R9a-SM-5O9DW
60-69 years, female
46.6
GTEX-XLM4-0011-R9A-SM-4AT45
60-69 years, male
46.6
GTEX-13VXU-0011-R9b-SM-5SI73
50-59 years, male
46.2
GTEX-11ZUS-0011-R9b-SM-5BC76
30-39 years, male
45.7
GTEX-12WSH-0011-R9b-SM-5LZUG
50-59 years, male
45.7
GTEX-1GN2E-0011-R9b-SM-9WG7F
60-69 years, male
45.7
GTEX-13NZA-0011-R9b-SM-5MR5I
60-69 years, male
45.5
GTEX-NL4W-0011-R9a-SM-2I3G1
50-59 years, male
45.0
GTEX-16XZZ-0011-R9b-SM-7DHKX
60-69 years, male
44.4
GTEX-ZE9C-0011-R9a-SM-4WWCY
60-69 years, male
44.4
GTEX-1EU9M-0011-R9a-SM-9WG61
60-69 years, male
44.4
GTEX-1C6VQ-0011-R9a-SM-7SB85
50-59 years, male
44.3
GTEX-13N2G-0011-R9b-SM-5MR4E
60-69 years, male
44.1
GTEX-15ER7-0011-R9b-SM-6PALF
20-29 years, female
43.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR
60-69 years, female
43.3
GTEX-1R46S-0011-R9a-SM-EZ6N7
60-69 years, female
43.2
GTEX-13CZV-0011-R9a-SM-5LZXT
60-69 years, male
43.0
GTEX-13O1R-0011-R9b-SM-5KM33
60-69 years, male
42.6
GTEX-14JIY-0011-R9a-SM-6EU34
60-69 years, male
42.5
GTEX-13SLX-0011-R9b-SM-5SI6X
50-59 years, female
42.0
GTEX-RU72-0011-R9A-SM-2TF67
50-59 years, female
42.0
GTEX-QDT8-0011-R9A-SM-CYPRD
30-39 years, female
42.0
GTEX-14BIL-0011-R9a-SM-5SI7A
50-59 years, male
41.8
GTEX-1B8L1-0011-R9b-SM-9WG5U
60-69 years, male
41.7
GTEX-1HBPM-0011-R9b-SM-ARL7C
60-69 years, female
41.6
GTEX-XMD1-0011-R9A-SM-4AT49
60-69 years, male
41.5
GTEX-1I19N-0011-R9a-SM-CMKHN
70-79 years, male
41.5
GTEX-15DCD-0011-R9b-SM-7KUED
70-79 years, female
41.3
GTEX-131YS-0011-R9b-SM-5EQLY
60-69 years, female
41.2
GTEX-PWO3-0011-R9A-SM-EVR2V
60-69 years, female
41.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ
70-79 years, male
41.0
GTEX-1I1GV-0011-R9b-SM-ARZLE
60-69 years, male
40.6
GTEX-1I1HK-0011-R9a-SM-CMKHK
60-69 years, male
40.2
GTEX-NPJ7-0011-R9a-SM-2TC5R
60-69 years, female
40.1
GTEX-1HSMO-0011-R9b-SM-CM2T2
60-69 years, male
40.0
GTEX-11EMC-0011-R9b-SM-DO921
60-69 years, female
39.8
GTEX-14BMV-0011-R9b-SM-5ZZUA
50-59 years, male
39.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8
50-59 years, male
39.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E
60-69 years, male
39.2
GTEX-13PL6-0011-R9b-SM-5O9CH
40-49 years, female
39.1
GTEX-15DYW-0011-R9b-SM-6PALB
60-69 years, female
39.1
GTEX-1HFI6-0011-R9b-SM-CMKH4
40-49 years, male
38.6
GTEX-1LVA9-0011-R9a-SM-EYYWF
50-59 years, male
38.6
GTEX-15G19-0011-R9b-SM-7KUEE
60-69 years, male
38.5
GTEX-1B933-0011-R9a-SM-79OOR
50-59 years, female
38.2
GTEX-1GF9W-0011-R9b-SM-9WG7J
60-69 years, male
37.9
GTEX-1EH9U-0011-R9b-SM-9WG5T
60-69 years, male
37.3
GTEX-11GSP-0011-R9b-SM-5NQ77
60-69 years, female
37.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP
60-69 years, male
37.1
GTEX-TSE9-0011-R9A-SM-3DB7Q
60-69 years, female
36.4
GTEX-14BIM-0011-R9a-SM-6LLJL
60-69 years, female
35.9
GTEX-11UD2-0011-R9b-SM-DO926
50-59 years, male
35.6
GTEX-R55E-0011-R9A-SM-2TC6C
20-29 years, male
35.5
GTEX-13FLV-0011-R9b-SM-5L3DA
50-59 years, male
35.4
GTEX-RNOR-0011-R9A-SM-2TF52
50-59 years, female
35.4
GTEX-T5JC-0011-R9A-SM-32PLV
20-29 years, male
35.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI
60-69 years, male
34.9
GTEX-ZAB4-0011-R9a-SM-4SOKG
40-49 years, male
34.7
GTEX-13QJC-0011-R9b-SM-5PNX3
60-69 years, female
34.6
GTEX-15EO6-0011-R9a-SM-6PALG
50-59 years, male
34.5
GTEX-1192X-0011-R9b-SM-DO934
50-59 years, male
34.5
GTEX-1CB4H-0011-R9a-SM-CKZNL
60-69 years, female
34.5
GTEX-13SLW-0011-R9a-SM-5O9BT
70-79 years, male
33.9
GTEX-NPJ8-0011-R9a-SM-2YUN5
40-49 years, male
33.6
GTEX-1H1DF-0011-R9b-SM-CM2RN
40-49 years, female
33.6
GTEX-1H23P-0011-R9a-SM-CM2T1
60-69 years, male
32.8
GTEX-1HR98-0011-R9b-SM-ARL79
60-69 years, male
32.7
GTEX-YFC4-0011-R9a-SM-4SOK4
40-49 years, female
32.1
GTEX-12WSC-0011-R9a-SM-5GU4U
50-59 years, male
32.0
GTEX-14PN4-0011-R9a-SM-6LLH9
50-59 years, male
32.0
GTEX-15CHQ-0011-R9a-SM-6LLHX
60-69 years, male
31.5
GTEX-13CIG-0011-R9a-SM-5K7VU
50-59 years, male
30.9
GTEX-1H1DG-0011-R9b-SM-ACKVB
70-79 years, male
30.6
GTEX-1F52S-0011-R9a-SM-9WG62
60-69 years, female
30.4
GTEX-12WSD-0011-R9a-SM-5GU6W
60-69 years, female
29.8
GTEX-12126-0011-R9b-SM-5BC6P
20-29 years, male
29.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7
60-69 years, male
28.3
GTEX-16NPV-0011-R9b-SM-79ONF
50-59 years, female
28.0
GTEX-ZF28-0011-R9a-SM-4WWDY
60-69 years, male
28.0
GTEX-13OVJ-0011-R9b-SM-5L3GD
50-59 years, female
27.5
GTEX-OHPN-0011-R9A-SM-5TDEJ
60-69 years, female
26.4
GTEX-1H2FU-0011-R9b-SM-CE6S4
60-69 years, female
25.5
GTEX-13NYB-0011-R9b-SM-5MR5P
40-49 years, male
25.4
GTEX-1GN73-0011-R9a-SM-CKZO5
60-69 years, male
25.1
GTEX-15DDE-0011-R9b-SM-6M46U
50-59 years, female
24.0
GTEX-13OW5-0011-R9b-SM-5O9CL
60-69 years, male
22.7
GTEX-OXRO-0011-R9A-SM-3NB1X
60-69 years, female
22.6
GTEX-13X6I-0011-R9b-SM-5PNZJ
60-69 years, male
22.2
GTEX-13NYS-0011-R9b-SM-5MR44
60-69 years, male
21.2
GTEX-QVJO-0011-R9A-SM-2S1QH
60-69 years, female
20.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK
40-49 years, female
20.5
GTEX-11DZ1-0011-R9a-SM-DO933
50-59 years, male
19.6
GTEX-11WQK-0011-R9b-SM-5BC6N
50-59 years, male
19.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY
60-69 years, male
19.4
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SPINAL CORD - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
