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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:104.0 nTPM
HPA Brain:228.3 nTPM
GTEx:104.0 nTPM
FANTOM5:157.0 Scaled Tags Per Million
Pig:229.8 nTPM
Mouse:418.8 nTPM
Allen mouse:6.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005459Antibody CAB010877
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

228.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 92.1
2846 Female, age 79, unknown 147.7
1781 Male, age 74, unknown 135.1
2290 Female, age 72, unknown 91.9
1857 Female, age 85, left hemisphere 86.3
1854 Male, age 80, left hemisphere 80.7
2288 Male, age 75, left hemisphere 79.0
2289 Male, age 61, right hemisphere 60.7
2481 Female, age 94, left hemisphere 55.8
Globus pallidus, externus
nTPM: 65.5
2395 Male, age 75, both hemispheres 93.7
2567 Female, age 72, unknown 64.2
2646 Male, age 61, right hemisphere 64.0
2772 Female, age 79, unknown 54.2
1996 Male, age 80, right hemisphere 51.3
Globus pallidus, internus
nTPM: 70.8
2287 Male, age 75, right hemisphere 102.7
2483 Female, age 94, right hemisphere 96.3
2778 Female, age 91, both hemispheres 77.7
2566 Female, age 72, unknown 69.9
2111 Female, age 85, right hemisphere 58.8
1818 Male, age 74, unknown 45.2
2037 Male, age 80, right hemisphere 45.0
Nucleus accumbens
nTPM: 94.7
1783 Male, age 74, unknown 129.2
1856 Female, age 91, right hemisphere 116.7
2698 Female, age 72, unknown 112.0
2824 Male, age 61, right hemisphere 96.6
2391 Female, age 94, left hemisphere 91.4
1806 Female, age 85, left hemisphere 89.0
2286 Male, age 75, left hemisphere 70.3
2732 Male, age 80, right hemisphere 52.2
Nucleus basalis of Meynert
nTPM: 83.1
2821 Male, age 75, both hemispheres 115.1
2393 Male, age 80, right hemisphere 81.0
2484 Female, age 94, left hemisphere 77.3
2569 Male, age 61, both hemispheres 59.1
Nucleus of the diagonal band
nTPM: 228.3
2775 Male, age 80, right hemisphere 297.1
2195 Female, age 85, both hemispheres 296.9
2029 Male, age 61, right hemisphere 245.8
1812 Female, age 91, both hemispheres 227.5
1979 Male, age 74, unknown 74.3
Putamen
nTPM: 90.2
2466 Female, age 79, unknown 124.9
1829 Male, age 74, unknown 105.2
1937 Female, age 91, right hemisphere 97.0
1838 Male, age 80, right hemisphere 94.5
2489 Female, age 72, unknown 71.2
2482 Female, age 94, left hemisphere 70.3
2647 Male, age 75, left hemisphere 68.6
Septal nuclei
nTPM: 197.4
1960 Male, age 74, unknown 369.3
2629 Female, age 94, right hemisphere 283.1
2031 Female, age 72, unknown 239.5
2059 Female, age 85, both hemispheres 176.7
2009 Female, age 91, both hemispheres 167.4
2394 Male, age 61, left hemisphere 89.8
2199 Male, age 80, right hemisphere 55.9
Stria terminalis, bed nucleus
nTPM: 190.7
1974 Female, age 91, both hemispheres 268.5
2486 Female, age 94, both hemispheres 230.9
2201 Male, age 74, unknown 72.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.3
Samples: 246

Max nTPM: 309.4
Min nTPM: 15.3
Std nTPM: 47.9
Median nTPM: 71.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 309.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 276.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 230.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 212.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 194.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 193.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 193.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 186.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 183.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 180.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 175.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 175.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 172.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 168.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 163.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 163.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 163.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 160.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 160.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 159.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 155.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 155.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 152.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 152.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 151.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 148.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 144.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 144.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 140.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 140.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 139.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 137.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 136.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 135.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 135.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 131.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 130.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 128.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 127.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 127.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 126.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 125.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 124.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 122.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 117.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 117.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 116.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 116.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 115.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 114.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 113.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 112.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 111.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 111.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 111.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 109.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 108.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 108.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 108.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 107.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 107.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 107.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 107.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 106.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 105.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 105.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 104.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 103.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 102.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 102.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 101.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 100.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 100.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 97.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 96.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 95.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 95.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 95.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 94.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 94.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 93.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 92.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 92.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 91.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 90.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 90.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 89.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 87.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 86.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 86.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 85.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 85.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 85.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 83.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 83.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 81.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 80.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 80.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 79.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 78.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 78.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 77.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 77.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 77.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 77.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 76.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 75.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 75.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 74.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 73.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 73.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 72.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 72.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 72.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 72.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 71.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 70.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 70.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 69.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 69.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 68.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 68.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 68.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 66.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 66.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 66.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 64.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 63.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 63.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 63.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 63.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 62.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 62.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 61.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 60.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 60.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 60.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 60.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 60.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 60.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 56.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 56.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 55.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 54.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 53.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 53.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 53.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 52.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 52.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 51.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 51.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 51.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 50.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 49.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 49.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 48.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 48.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 47.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 46.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 45.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 45.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 45.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 45.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 44.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 44.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 43.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 43.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 43.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 43.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 43.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 43.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 42.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 42.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 42.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 42.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 41.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 41.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 40.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 40.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 40.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 39.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 39.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 39.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 38.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 37.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 37.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 37.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 37.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 37.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 35.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 35.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 35.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 35.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 33.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 33.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 32.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 31.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 31.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 30.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 29.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 29.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 29.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 29.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 28.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 26.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 26.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 25.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 25.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 25.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 25.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 24.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 23.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 22.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 21.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 21.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 20.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 20.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 18.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 18.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 15.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 104.0
Samples: 246

Max nTPM: 267.3
Min nTPM: 14.6
Std nTPM: 51.3
Median nTPM: 99.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 267.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 234.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 227.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 223.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 222.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 212.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 203.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 203.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 202.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 199.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 195.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 192.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 189.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 187.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 186.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 185.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 184.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 183.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 181.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 180.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 178.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 176.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 176.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 175.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 173.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 173.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 171.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 171.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 171.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 169.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 168.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 168.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 167.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 167.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 167.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 166.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 165.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 165.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 163.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 163.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 162.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 161.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 158.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 157.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 157.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 157.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 155.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 154.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 153.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 153.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 152.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 152.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 149.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 147.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 147.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 146.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 146.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 146.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 146.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 144.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 144.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 143.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 141.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 140.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 136.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 133.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 132.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 132.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 131.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 131.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 130.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 130.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 129.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 128.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 127.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 126.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 125.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 124.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 124.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 122.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 122.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 122.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 119.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 119.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 117.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 117.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 117.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 116.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 116.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 116.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 116.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 115.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 115.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 115.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 115.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 115.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 115.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 114.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 113.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 113.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 113.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 112.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 112.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 112.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 112.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 111.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 111.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 111.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 111.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 110.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 110.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 110.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 106.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 106.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 106.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 105.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 105.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 105.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 104.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 103.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 103.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 102.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 100.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 99.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 98.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 97.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 97.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 97.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 97.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 96.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 96.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 96.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 96.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 95.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 95.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 94.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 94.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 94.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 92.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 92.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 91.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 91.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 91.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 90.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 89.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 89.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 87.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 87.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 86.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 85.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 85.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 85.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 85.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 85.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 84.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 84.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 82.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 80.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 80.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 80.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 80.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 79.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 78.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 77.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 75.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 74.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 72.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 72.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 71.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 71.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 70.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 69.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 69.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 67.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 67.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 67.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 66.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 66.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 65.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 65.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 63.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 62.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 61.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 60.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 59.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 58.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 58.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 58.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 57.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 57.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 56.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 56.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 54.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 54.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 54.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 53.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 52.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 50.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 50.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 50.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 49.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 48.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 48.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 47.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 46.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 43.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 43.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 42.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 41.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 41.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 41.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 40.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 40.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 39.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 39.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 38.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 37.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 36.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 36.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 36.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 35.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 33.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 32.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 32.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 32.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 31.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 31.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 30.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 29.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 29.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 28.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 28.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 25.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 25.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 24.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 24.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 22.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 21.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 19.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.6
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Brain - Putamen (basal ganglia)
Average nTPM: 84.4
Samples: 205

Max nTPM: 272.6
Min nTPM: 18.1
Std nTPM: 48.3
Median nTPM: 69.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 272.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 249.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 228.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 212.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 208.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 192.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 191.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 191.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 185.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 184.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 184.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 175.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 172.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 172.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 163.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 163.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 163.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 158.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 154.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 153.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 152.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 151.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 150.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 150.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 150.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 147.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 143.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 142.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 139.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 139.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 137.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 136.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 135.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 135.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 133.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 131.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 128.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 126.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 126.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 124.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 122.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 122.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 116.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 115.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 114.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 113.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 112.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 112.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 112.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 112.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 109.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 107.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 106.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 106.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 103.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 102.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 102.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 102.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 101.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 101.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 101.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 99.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 98.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 98.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 97.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 97.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 96.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 95.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 95.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 95.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 94.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 93.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 93.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 92.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 92.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 92.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 91.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 89.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 86.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 86.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 85.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 84.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 84.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 84.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 83.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 79.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 78.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 78.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 77.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 77.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 77.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 77.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 76.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 76.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 75.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 75.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 74.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 73.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 72.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 70.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 70.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 69.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 69.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 69.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 69.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 69.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 68.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 67.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 67.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 66.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 65.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 65.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 65.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 64.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 64.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 64.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 63.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 63.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 62.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 62.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 61.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 61.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 61.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 61.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 60.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 60.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 59.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 59.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 59.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 59.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 57.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 57.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 57.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 56.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 55.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 52.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 52.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 52.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 51.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 51.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 51.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 50.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 49.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 49.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 48.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 48.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 47.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 46.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 46.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 46.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 46.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 46.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 45.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 45.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 45.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 44.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 44.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 44.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 43.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 43.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 42.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 42.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 42.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 42.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 41.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 40.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 40.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 40.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 40.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 39.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 39.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 39.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 39.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 38.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 38.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 38.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 38.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 37.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 36.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 36.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 35.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 35.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 35.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 34.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 34.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 33.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 33.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 32.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 31.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 30.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 29.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 29.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 29.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 28.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 26.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 24.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 24.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 23.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 22.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 19.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 18.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

157.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 132.5
FF:10164-103B2 76 years, female 132.5
Nucleus accumbens
Scaled Tags Per Million: 130.4
FF:10037-101F1 23-56 years, mixed 130.4
Putamen
Scaled Tags Per Million: 157.0
FF:10176-103C5 60 years, female 157.0
Globus pallidus
Scaled Tags Per Million: 75.5
FF:10175-103C4 60 years, female 78.4
FF:10161-103A8 76 years, female 72.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

229.8
Pig sample Sample description nTPM
Caudate
nTPM: 227.6
Samples: 4

Max nTPM: 275.7
Min nTPM: 194.8
Sample A Female 206.4
Sample B Female 233.3
Sample C Male 275.7
Sample D Male 194.8
Putamen
nTPM: 229.8
Samples: 4

Max nTPM: 329.5
Min nTPM: 104.4
Sample A Female 104.4
Sample B Female 251.6
Sample C Male 329.5
Sample D Male 233.6
Septum
nTPM: 124.9
Samples: 4

Max nTPM: 167.6
Min nTPM: 48.4
Sample A Female 167.6
Sample B Female 147.7
Sample C Male 48.4
Sample D Male 136.0
Ventral pallidum
nTPM: 164.3
Samples: 4

Max nTPM: 232.4
Min nTPM: 93.9
Sample A Female 232.4
Sample B Female 166.8
Sample C Male 93.9
Sample D Male 164.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

418.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 418.8
Samples: 4

Max nTPM: 498.5
Min nTPM: 368.0
Sample A Male 369.8
Sample B Male 368.0
Sample C Female 498.5
Sample D Female 438.7
Septum
nTPM: 243.4
Samples: 4

Max nTPM: 293.6
Min nTPM: 182.8
Sample A Male 293.6
Sample B Male 229.0
Sample C Female 268.0
Sample D Female 182.8
Ventral forebrain
nTPM: 390.6
Samples: 4

Max nTPM: 462.0
Min nTPM: 289.2
Sample A Male 413.8
Sample B Male 289.2
Sample C Female 397.4
Sample D Female 462.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.6
79904550 Antisense, RP_071218_03_E03, Mouse strain C57BL/6J (56 days, male) 8.2
79908848 Antisense, RP_071218_03_E03, Mouse strain C57BL/6J (56 days, male) 6.9
990 Antisense, RP_Baylor_103043, Mouse strain C57BL/6J (56 days, male) 5.1
986 Antisense, RP_Baylor_103043, Mouse strain C57BL/6J (56 days, male) 1.6
Pallidum
Expression energy: 3.8
79904550 Antisense, RP_071218_03_E03, Mouse strain C57BL/6J (56 days, male) 4.7
79908848 Antisense, RP_071218_03_E03, Mouse strain C57BL/6J (56 days, male) 3.4
990 Antisense, RP_Baylor_103043, Mouse strain C57BL/6J (56 days, male) 3.0
986 Antisense, RP_Baylor_103043, Mouse strain C57BL/6J (56 days, male) 0.2

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