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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:27.9 nTPM
HPA Brain:166.9 nTPM
GTEx:27.9 nTPM
FANTOM5:221.7 Scaled Tags Per Million
Pig:80.9 nTPM
Mouse:44.7 nTPM
Allen mouse:3.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001216Antibody CAB004268
Glial cells Not detectedMedium
Neuronal cells LowMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 125.8
2288 Male, age 75, left hemisphere 166.9
2481 Female, age 94, left hemisphere 145.6
1781 Male, age 74, unknown 135.5
2846 Female, age 79, unknown 133.1
2290 Female, age 72, unknown 114.9
1857 Female, age 85, left hemisphere 111.0
1854 Male, age 80, left hemisphere 107.5
2289 Male, age 61, right hemisphere 91.8
Globus pallidus, externus
nTPM: 152.6
1996 Male, age 80, right hemisphere 167.5
2395 Male, age 75, both hemispheres 166.7
2772 Female, age 79, unknown 156.2
2567 Female, age 72, unknown 138.5
2646 Male, age 61, right hemisphere 134.0
Globus pallidus, internus
nTPM: 166.9
2287 Male, age 75, right hemisphere 217.1
2483 Female, age 94, right hemisphere 185.9
1818 Male, age 74, unknown 168.5
2778 Female, age 91, both hemispheres 156.8
2037 Male, age 80, right hemisphere 151.4
2111 Female, age 85, right hemisphere 145.4
2566 Female, age 72, unknown 143.1
Nucleus accumbens
nTPM: 114.7
2286 Male, age 75, left hemisphere 160.8
2391 Female, age 94, left hemisphere 159.3
2698 Female, age 72, unknown 131.5
1783 Male, age 74, unknown 102.8
1806 Female, age 85, left hemisphere 100.6
2732 Male, age 80, right hemisphere 98.2
2824 Male, age 61, right hemisphere 83.2
1856 Female, age 91, right hemisphere 81.1
Nucleus basalis of Meynert
nTPM: 127.8
2569 Male, age 61, both hemispheres 148.7
2821 Male, age 75, both hemispheres 135.2
2484 Female, age 94, left hemisphere 128.7
2393 Male, age 80, right hemisphere 98.7
Nucleus of the diagonal band
nTPM: 136.5
2029 Male, age 61, right hemisphere 158.6
2775 Male, age 80, right hemisphere 154.3
1812 Female, age 91, both hemispheres 145.3
2195 Female, age 85, both hemispheres 134.3
1979 Male, age 74, unknown 90.1
Putamen
nTPM: 122.6
2482 Female, age 94, left hemisphere 159.1
2647 Male, age 75, left hemisphere 150.1
1829 Male, age 74, unknown 135.0
2466 Female, age 79, unknown 109.4
2489 Female, age 72, unknown 105.5
1937 Female, age 91, right hemisphere 103.2
1838 Male, age 80, right hemisphere 96.2
Septal nuclei
nTPM: 123.0
2031 Female, age 72, unknown 156.8
1960 Male, age 74, unknown 143.1
2629 Female, age 94, right hemisphere 131.5
2009 Female, age 91, both hemispheres 120.9
2059 Female, age 85, both hemispheres 112.0
2394 Male, age 61, left hemisphere 98.9
2199 Male, age 80, right hemisphere 97.8
Stria terminalis, bed nucleus
nTPM: 121.1
1974 Female, age 91, both hemispheres 142.7
2486 Female, age 94, both hemispheres 120.3
2201 Male, age 74, unknown 100.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 27.9
Samples: 246

Max nTPM: 85.5
Min nTPM: 10.6
Std nTPM: 10.0
Median nTPM: 25.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 85.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 76.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 65.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 64.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 56.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 52.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 51.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 48.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 48.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 47.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 45.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 44.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 44.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 43.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 41.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 40.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 39.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 39.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 39.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 38.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 38.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 38.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 38.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 37.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 37.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 37.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 37.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 37.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 37.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 36.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 36.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 36.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 36.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 36.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 35.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 35.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 35.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 35.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 35.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 35.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 34.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 34.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 34.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 34.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 34.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 34.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 33.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 33.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 33.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 33.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 33.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 33.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 33.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 32.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 32.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 32.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 31.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 31.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 31.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 31.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 31.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 31.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 31.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 31.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 30.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 30.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 30.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 30.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 30.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 30.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 29.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 29.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 29.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 29.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 29.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 29.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 28.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 28.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 28.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 28.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 28.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 28.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 28.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 28.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 27.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 27.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 27.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 27.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 27.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 27.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 27.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 27.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 27.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 27.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 27.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 27.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 27.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 27.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 26.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 26.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 26.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 26.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 26.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 26.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 26.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 26.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 26.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 26.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 25.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 25.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 25.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 25.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 25.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 25.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 25.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 25.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 25.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 25.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 25.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 25.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 25.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 24.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 24.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 24.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 24.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 24.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 24.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 24.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 24.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 24.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 24.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 24.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 24.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 23.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 23.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 23.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 23.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 23.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 23.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 23.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 23.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 23.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 23.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 23.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 23.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 23.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 23.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 22.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 22.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 22.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 22.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 22.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 22.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 22.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 22.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 22.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 22.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 22.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 22.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 22.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 22.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 22.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 22.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 21.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 21.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 21.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 21.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 21.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 21.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 21.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 21.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 21.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 21.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 21.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 21.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 21.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 21.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 20.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 20.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 20.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 20.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 20.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 20.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 20.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 20.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 20.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 20.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 19.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 19.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 19.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 19.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 19.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 19.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 19.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 18.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 18.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 18.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 18.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 18.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 18.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 18.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 18.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 18.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 18.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 18.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 17.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 17.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 17.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 17.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 16.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 16.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 15.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 15.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 14.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 14.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 14.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 13.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 12.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 12.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 11.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 10.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 18.7
Samples: 246

Max nTPM: 45.1
Min nTPM: 7.9
Std nTPM: 5.6
Median nTPM: 18.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 45.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 38.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 38.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 33.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 32.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 32.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 32.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 32.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 30.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 30.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 30.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 29.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 29.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 29.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 27.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 27.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 27.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 26.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 26.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 26.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 26.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 25.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 25.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 25.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 24.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 24.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 24.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 24.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 24.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 24.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 24.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 24.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 24.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 24.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 23.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 23.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 23.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 23.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 23.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 23.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 23.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 23.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 23.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 23.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 23.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 23.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 22.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 22.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 22.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 22.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 22.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 22.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 22.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 22.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 22.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 21.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 21.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 21.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 21.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 21.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 21.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 21.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 21.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 21.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 21.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 21.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 21.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 21.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 21.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 21.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 20.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 20.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 20.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 20.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 20.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 20.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 20.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 20.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 20.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 20.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 20.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 20.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 20.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 20.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 20.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 20.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 20.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 20.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 20.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 19.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 19.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 19.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 19.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 19.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 19.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 19.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 19.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 19.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 19.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 19.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 19.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 19.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 19.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 19.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 19.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 19.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 19.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 19.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 19.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 19.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 19.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 19.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 18.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 18.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 18.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 18.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 18.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 18.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 18.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 18.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 18.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 18.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 18.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 18.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 18.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 18.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 18.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 18.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 18.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 18.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 18.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 17.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 17.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 17.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 17.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 17.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 17.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 17.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 17.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 17.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 17.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 17.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 17.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 17.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 17.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 17.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 16.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 16.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 16.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 16.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 16.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 16.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 16.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 16.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 16.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 16.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 16.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 16.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 16.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 16.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 16.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 16.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 16.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 16.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 16.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 16.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 15.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 15.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 15.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 15.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 15.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 15.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 15.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 15.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 15.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 15.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 15.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 15.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 15.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 14.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 14.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 14.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 14.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 14.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 14.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 14.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 14.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 14.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 14.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 14.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 14.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 13.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 13.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 13.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 13.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 13.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 13.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 13.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 13.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 13.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 13.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 13.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 12.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 12.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 12.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 12.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 12.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 12.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 12.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 12.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 12.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 12.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 12.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 12.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 12.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 12.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 12.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 11.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 11.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 11.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 11.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 11.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 11.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 11.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 11.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 11.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 11.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 10.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 10.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 10.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 10.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 10.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 10.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 10.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 9.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 9.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 9.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 9.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 9.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 9.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 8.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 7.9
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Brain - Putamen (basal ganglia)
Average nTPM: 27.2
Samples: 205

Max nTPM: 70.4
Min nTPM: 13.7
Std nTPM: 8.3
Median nTPM: 25.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 70.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 58.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 56.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 56.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 53.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 52.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 47.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 43.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 42.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 42.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 42.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 40.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 40.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 40.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 38.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 38.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 38.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 38.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 37.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 37.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 37.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 36.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 36.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 35.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 35.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 35.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 34.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 34.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 34.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 34.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 34.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 33.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 33.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 33.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 33.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 33.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 32.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 32.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 32.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 32.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 32.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 32.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 32.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 32.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 32.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 31.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 31.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 31.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 31.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 31.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 31.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 31.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 31.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 30.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 30.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 30.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 29.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 29.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 29.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 29.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 29.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 29.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 29.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 29.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 29.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 28.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 28.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 28.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 28.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 28.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 28.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 28.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 27.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 27.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 27.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 27.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 27.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 27.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 27.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 27.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 27.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 27.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 27.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 27.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 27.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 26.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 26.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 26.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 26.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 26.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 26.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 26.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 26.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 26.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 25.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 25.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 25.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 25.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 25.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 25.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 25.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 25.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 25.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 25.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 25.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 25.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 25.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 25.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 25.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 25.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 24.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 24.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 24.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 24.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 24.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 24.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 24.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 24.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 24.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 24.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 24.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 24.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 23.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 23.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 23.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 23.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 23.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 23.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 23.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 23.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 23.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 23.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 22.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 22.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 22.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 22.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 22.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 22.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 22.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 22.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 22.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 22.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 22.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 22.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 21.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 21.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 21.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 21.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 21.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 21.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 21.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 21.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 21.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 20.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 20.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 20.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 20.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 20.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 20.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 20.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 20.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 20.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 20.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 20.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 20.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 19.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 19.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 19.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 19.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 19.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 19.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 19.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 19.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 19.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 18.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 18.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 18.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 18.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 18.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 18.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 18.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 17.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 17.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 17.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 17.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 17.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 17.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 16.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 16.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 16.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 15.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 15.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 14.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 13.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

221.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 164.1
FF:10164-103B2 76 years, female 164.1
Nucleus accumbens
Scaled Tags Per Million: 221.7
FF:10037-101F1 23-56 years, mixed 221.7
Putamen
Scaled Tags Per Million: 142.5
FF:10176-103C5 60 years, female 142.5
Globus pallidus
Scaled Tags Per Million: 218.2
FF:10161-103A8 76 years, female 242.6
FF:10175-103C4 60 years, female 193.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.9
Pig sample Sample description nTPM
Caudate
nTPM: 69.8
Samples: 4

Max nTPM: 80.7
Min nTPM: 60.1
Sample A Female 71.7
Sample B Female 66.6
Sample C Male 80.7
Sample D Male 60.1
Putamen
nTPM: 80.9
Samples: 4

Max nTPM: 90.8
Min nTPM: 69.5
Sample A Female 89.6
Sample B Female 69.5
Sample C Male 90.8
Sample D Male 73.8
Septum
nTPM: 72.7
Samples: 4

Max nTPM: 81.2
Min nTPM: 61.7
Sample A Female 78.0
Sample B Female 69.7
Sample C Male 81.2
Sample D Male 61.7
Ventral pallidum
nTPM: 77.5
Samples: 4

Max nTPM: 89.7
Min nTPM: 70.6
Sample A Female 73.9
Sample B Female 75.6
Sample C Male 89.7
Sample D Male 70.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 44.7
Samples: 4

Max nTPM: 46.2
Min nTPM: 42.2
Sample A Male 45.0
Sample B Male 45.4
Sample C Female 46.2
Sample D Female 42.2
Septum
nTPM: 34.9
Samples: 4

Max nTPM: 38.7
Min nTPM: 31.6
Sample A Male 36.5
Sample B Male 31.6
Sample C Female 32.9
Sample D Female 38.7
Ventral forebrain
nTPM: 39.0
Samples: 4

Max nTPM: 41.4
Min nTPM: 33.4
Sample A Male 41.3
Sample B Male 41.4
Sample C Female 33.4
Sample D Female 40.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.7
68546560 Antisense, RP_050120_02_F12, Mouse strain C57BL/6J (56 days, male) 9.7
70812859 Antisense, RP_050712_02_G05, Mouse strain C57BL/6J (56 days, male) 1.1
74359574 Antisense, RP_051219_04_H06, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 2.3
68546560 Antisense, RP_050120_02_F12, Mouse strain C57BL/6J (56 days, male) 6.1
70812859 Antisense, RP_050712_02_G05, Mouse strain C57BL/6J (56 days, male) 0.6
74359574 Antisense, RP_051219_04_H06, Mouse strain C57BL/6J (56 days, male) 0.1

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