We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PAM
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PAM
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:171.9 nTPM
HPA Brain:275.5 nTPM
GTEx:171.9 nTPM
Pig:99.6 nTPM
Mouse:197.9 nTPM
Allen mouse:16.3 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 275.5
2226 Male, age 75, left hemisphere 365.7
1961 Female, age 42, unknown 185.2
Dorsomedial nucleus
nTPM: 138.8
2041 Female, age 72, unknown 160.8
1989 Male, age 62, unknown 141.0
2017 Female, age 42, unknown 114.6
Lateral hypothalamic area
nTPM: 195.3
1791 Male, age 80, right hemisphere 236.9
2228 Male, age 66, unknown 216.0
2271 Male, age 75, both hemispheres 202.3
2412 Male, age 62, unknown 125.8
Mammillary body
nTPM: 96.0
1923 Female, age 72, unknown 121.9
2413 Male, age 66, unknown 110.0
1948 Female, age 72, unknown 89.6
1945 Male, age 80, right hemisphere 79.9
1834 Female, age 42, unknown 78.4
Paraventricular nucleus
nTPM: 115.3
2700 Male, age 62, unknown 115.3
Preoptic area
nTPM: 122.6
1907 Male, age 80, right hemisphere 179.8
2414 Female, age 72, unknown 98.3
1861 Female, age 42, unknown 89.7
Supraoptic nucleus
nTPM: 123.4
1894 Female, age 72, unknown 127.2
2835 Female, age 72, unknown 124.1
2043 Male, age 62, unknown 118.8
Ventromedial nucleus
nTPM: 162.6
1982 Female, age 72, unknown 167.7
1822 Female, age 42, unknown 157.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 171.9
Samples: 202

Max nTPM: 431.2
Min nTPM: 19.5
Std nTPM: 76.0
Median nTPM: 165.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 431.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 418.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 400.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 380.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 347.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 339.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 324.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 306.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 305.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 302.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 299.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 299.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 297.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 291.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 285.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 285.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 283.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 279.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 264.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 262.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 262.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 259.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 258.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 257.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 256.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 256.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 252.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 251.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 248.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 247.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 244.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 242.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 240.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 240.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 238.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 234.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 232.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 231.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 230.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 228.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 226.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 225.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 225.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 225.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 224.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 224.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 223.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 223.5
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 223.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 220.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 220.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 219.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 219.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 217.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 216.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 216.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 213.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 212.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 212.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 211.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 210.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 210.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 208.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 207.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 207.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 206.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 206.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 201.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 201.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 200.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 197.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 195.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 194.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 194.1
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 192.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 190.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 189.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 187.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 184.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 184.2
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 184.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 183.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 183.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 180.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 180.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 180.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 180.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 179.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 178.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 175.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 174.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 174.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 172.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 172.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 171.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 169.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 169.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 168.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 167.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 165.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 165.4
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 165.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 165.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 165.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 162.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 161.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 161.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 160.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 160.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 159.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 159.0
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 158.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 158.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 158.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 156.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 154.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 153.9
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 153.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 151.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 151.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 150.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 149.6
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 149.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 149.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 148.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 148.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 148.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 148.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 147.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 147.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 146.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 145.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 143.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 143.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 142.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 142.5
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 140.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 138.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 132.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 131.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 128.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 128.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 125.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 125.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 124.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 124.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 122.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 122.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 121.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 120.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 118.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 116.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 116.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 113.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 112.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 112.0
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 110.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 109.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 106.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 106.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 106.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 103.4
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 100.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 100.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 99.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 95.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 95.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 91.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 91.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 89.7
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 87.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 86.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 85.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 84.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 83.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 82.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 81.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 81.4
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 80.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 78.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 76.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 76.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 74.5
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 74.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 73.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 73.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 67.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 67.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 66.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 61.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 60.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 55.4
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 54.1
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 53.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 51.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 49.9
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 47.0
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 46.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 43.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 41.1
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 33.1
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 19.5
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 99.6
Samples: 4

Max nTPM: 124.4
Min nTPM: 87.9
Sample A Female 124.4
Sample B Female 95.1
Sample C Male 91.0
Sample D Male 87.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 197.9
Samples: 4

Max nTPM: 213.6
Min nTPM: 180.9
Sample A Male 213.6
Sample B Male 204.2
Sample C Female 193.0
Sample D Female 180.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.3
73997147 Antisense, RP_051214_03_F06, Mouse strain C57BL/6J (56 days, male) 19.8
69782706 Antisense, RP_050505_03_E10, Mouse strain C57BL/6J (56 days, male) 12.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org