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GABRA6
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  • GABRA6
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Medium
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Medium
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Medium
White matter cells - cytoplasm/membrane: Medium
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:203.5 nTPM
HPA Brain:150.4 nTPM
GTEx:203.5 nTPM
FANTOM5:262.6 Scaled Tags Per Million
Pig:263.8 nTPM
Mouse:1073.9 nTPM
Allen mouse:12.9 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB022462
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Medium
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Low
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Medium
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Medium
White matter cells - cytoplasm/membrane Medium
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.4
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 150.4
1774 Male, age 80, left hemisphere 188.5
1768 Female, age 72, unknown 183.9
2006 Male, age 61, right hemisphere 176.9
2101 Male, age 74, right hemisphere 170.1
2055 Female, age 91, right hemisphere 167.9
1788 Male, age 55, unknown 151.9
1769 Male, age 76, right hemisphere 100.8
2003 Female, age 85, right hemisphere 63.3
Cerebellar nuclei
nTPM: 9.0
2318 Male, age 74, left hemisphere 60.2
1966 Female, age 91, left hemisphere 6.6
2005 Male, age 80, left hemisphere 4.3
2783 Female, age 72, unknown 2.7
1871 Male, age 74, unknown 2.4
1879 Male, age 55, unknown 2.3
2175 Male, age 61, right hemisphere 1.6
2882 Male, age 76, left hemisphere 0.9
2177 Female, age 85, both hemispheres 0.4
Flocculonodular lobe
nTPM: 128.5
1771 Male, age 80, left hemisphere 181.0
2176 Female, age 91, right hemisphere 159.2
1835 Female, age 85, right hemisphere 136.0
1792 Male, age 74, unknown 113.3
1765 Male, age 55, unknown 112.7
2004 Male, age 61, right hemisphere 100.9
1767 Male, age 76, left hemisphere 96.6
Vermis
nTPM: 135.8
1928 Female, age 72, unknown 203.2
2834 Male, age 80, left hemisphere 182.8
1751 Male, age 74, right hemisphere 159.3
1825 Male, age 74, unknown 135.8
1778 Female, age 91, left hemisphere 134.3
1988 Female, age 85, left hemisphere 126.2
1766 Male, age 55, unknown 120.5
1770 Male, age 76, left hemisphere 110.3
2460 Male, age 61, both hemispheres 49.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 203.5
Samples: 215

Max nTPM: 419.4
Min nTPM: 0.8
Std nTPM: 55.7
Median nTPM: 209.4
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 419.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 334.9
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 314.4
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 312.3
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 305.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 303.2
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 299.7
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 297.3
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 295.6
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 294.9
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 291.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 282.7
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 282.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 274.8
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 271.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 271.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 270.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 270.5
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 268.7
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 268.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 268.2
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 267.7
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 267.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 265.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 265.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 264.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 264.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 262.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 257.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 257.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 254.3
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 251.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 249.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 248.6
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 248.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 247.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 246.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 245.8
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 245.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 244.6
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 243.0
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 243.0
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 242.7
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 242.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 242.2
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 241.7
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 241.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 241.0
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 240.3
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 240.1
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 239.9
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 239.2
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 238.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 237.5
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 236.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 235.7
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 235.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 235.2
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 233.8
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 233.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 232.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 232.7
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 232.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 232.3
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 232.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 231.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 231.2
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 230.9
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 230.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 230.4
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 230.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 229.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 228.0
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 227.5
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 227.3
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 227.1
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 226.9
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 226.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 225.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 224.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 223.0
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 222.8
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 222.5
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 222.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 221.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 221.2
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 220.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 220.6
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 220.6
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 219.6
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 219.4
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 218.5
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 218.3
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 218.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 218.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 218.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 218.2
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 218.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 217.6
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 216.2
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 216.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 216.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 214.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 214.6
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 214.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 212.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 211.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 209.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 207.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 206.6
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 206.3
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 205.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 205.4
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 204.4
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 204.3
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 204.2
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 203.2
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 202.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 202.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 202.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 201.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 201.9
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 201.6
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 200.9
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 200.3
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 200.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 199.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 199.2
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 197.6
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 197.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 196.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 194.5
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 193.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 192.5
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 191.9
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 191.6
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 189.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 189.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 187.8
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 187.6
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 187.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 185.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 185.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 185.1
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 184.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 184.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 184.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 183.8
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 183.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 182.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 182.2
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 181.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 180.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 178.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 178.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 178.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 178.5
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 178.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 176.8
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 176.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 176.6
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 171.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 170.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 169.8
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 169.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 168.3
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 167.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 167.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 166.9
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 165.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 162.0
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 161.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 161.3
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 160.1
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 158.3
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 157.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 157.5
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 157.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 157.0
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 155.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 154.1
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 153.1
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 152.9
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 148.3
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 147.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 146.6
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 146.4
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 146.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 145.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 134.8
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 133.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 132.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 124.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 123.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 119.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 118.6
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 118.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 118.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 116.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 114.7
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 114.1
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 107.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 105.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 101.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 98.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 98.0
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 95.4
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 89.1
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 80.5
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 80.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 73.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 72.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 63.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 62.9
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 0.8
Show allShow less
Brain - Cerebellum
Average nTPM: 150.0
Samples: 241

Max nTPM: 259.3
Min nTPM: 37.4
Std nTPM: 37.4
Median nTPM: 145.9
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 259.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 255.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 249.0
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 240.4
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 234.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 230.5
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 225.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 224.5
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 220.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 219.0
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 218.4
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 217.5
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 215.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 215.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 211.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 208.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 207.1
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 205.3
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 204.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 201.3
GTEX-WL46-2826-SM-3LK81 50-59 years, male 200.0
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 199.1
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 197.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 196.4
GTEX-13112-2926-SM-5DUWT 50-59 years, male 195.7
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 195.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 195.0
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 194.3
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 194.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 193.9
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 193.4
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 193.1
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 191.6
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 191.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 188.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 188.7
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 187.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 187.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 187.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 187.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 185.7
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 184.5
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 183.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 183.8
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 183.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 182.7
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 181.8
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 181.6
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 181.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 180.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 179.6
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 178.8
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 177.3
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 177.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 176.0
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 175.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 175.5
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 174.8
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 174.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 173.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 173.3
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 173.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 172.8
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 172.8
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 172.1
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 171.6
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 171.2
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 170.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 170.1
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 169.9
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 169.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 169.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 168.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 167.9
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 167.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 166.1
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 165.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 165.2
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 165.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 164.5
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 164.3
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 164.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 163.7
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 163.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 162.5
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 162.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 160.9
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 160.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 160.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 160.4
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 160.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 159.4
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 159.0
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 158.5
GTEX-1B933-3026-SM-731DB 50-59 years, female 157.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 157.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 156.9
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 156.3
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 156.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 155.9
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 155.2
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 154.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 153.6
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 153.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 153.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 153.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 152.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 152.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 151.2
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 151.1
GTEX-17EVP-2926-SM-793BU 40-49 years, male 150.9
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 150.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 150.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 148.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 148.6
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 148.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 147.8
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 147.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 147.0
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 146.6
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 145.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 145.9
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 145.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 144.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 144.8
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 144.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 144.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 143.9
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 143.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 143.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 143.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 143.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 143.4
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 143.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 142.0
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 141.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 141.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 140.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 140.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 140.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 140.2
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 140.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 140.1
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 139.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 139.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 138.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 138.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 138.5
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 138.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 137.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 137.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 137.1
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 136.8
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 136.4
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 135.7
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 135.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 135.5
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 135.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 135.0
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 134.5
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 134.5
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 134.0
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 133.6
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 133.4
GTEX-11EI6-2926-SM-5985U 60-69 years, male 133.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 132.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 132.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 132.0
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 131.8
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 130.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 129.9
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 129.5
GTEX-14PN4-3026-SM-664O4 50-59 years, male 129.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 129.3
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 129.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 128.3
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 128.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 127.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 126.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 126.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 126.2
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 125.9
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 124.4
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 124.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 124.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 123.0
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 122.4
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 121.9
GTEX-144GL-2926-SM-5O99F 50-59 years, male 121.5
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 121.5
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 121.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 120.8
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 120.7
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 120.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 119.8
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 119.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 119.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 118.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 118.3
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 117.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 117.3
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 117.2
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 116.0
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 115.8
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 115.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 114.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 114.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 113.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 113.6
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 113.4
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 112.1
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 110.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 109.9
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 109.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 108.0
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 108.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 105.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 103.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 103.2
GTEX-11DYG-2926-SM-5H132 60-69 years, male 102.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 102.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 101.4
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 101.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 98.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 96.5
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 95.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 95.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 94.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 93.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 93.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 91.2
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 87.0
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 82.6
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 82.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 77.0
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 73.3
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 63.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 61.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 56.4
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 55.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 37.4
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 262.6
FF:10166-103B4 76 years, female 283.7
FF:10083-102B2 22-68 years, mixed 241.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

263.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 263.8
Samples: 4

Max nTPM: 324.0
Min nTPM: 220.8
Sample A Female 324.0
Sample B Female 220.8
Sample C Male 268.0
Sample D Male 242.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1073.9
Mouse sample Sample description nTPM
Cerebellum
nTPM: 1073.9
Samples: 4

Max nTPM: 1164.3
Min nTPM: 980.4
Sample A Male 980.4
Sample B Male 1021.1
Sample C Female 1129.7
Sample D Female 1164.3

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.9
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 12.9
308055734 Antisense, RP_140710_02_B07, Mouse strain C57BL/6J (56 days, male) 17.8
75551467 Antisense, RP_060523_02_B04, Mouse strain C57BL/6J (56 days, male) 7.9

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