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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:92.7 nTPM
HPA Brain:75.7 nTPM
GTEx:92.7 nTPM
FANTOM5:164.7 Scaled Tags Per Million
Pig:44.6 nTPM
Mouse:134.7 nTPM
Allen mouse:2.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036518
Glial cells Not detected
Neuronal cells High


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 75.7
2290 Female, age 72, unknown 95.8
2846 Female, age 79, unknown 94.5
1857 Female, age 85, left hemisphere 83.1
1781 Male, age 74, unknown 78.4
1854 Male, age 80, left hemisphere 70.9
2288 Male, age 75, left hemisphere 66.4
2289 Male, age 61, right hemisphere 61.2
2481 Female, age 94, left hemisphere 55.6
Globus pallidus, externus
nTPM: 43.4
2395 Male, age 75, both hemispheres 57.6
1996 Male, age 80, right hemisphere 43.5
2772 Female, age 79, unknown 41.5
2567 Female, age 72, unknown 40.4
2646 Male, age 61, right hemisphere 34.2
Globus pallidus, internus
nTPM: 46.0
2287 Male, age 75, right hemisphere 56.4
2483 Female, age 94, right hemisphere 56.4
1818 Male, age 74, unknown 45.5
2778 Female, age 91, both hemispheres 44.2
2566 Female, age 72, unknown 44.1
2037 Male, age 80, right hemisphere 39.9
2111 Female, age 85, right hemisphere 35.9
Nucleus accumbens
nTPM: 71.2
1783 Male, age 74, unknown 90.9
2698 Female, age 72, unknown 86.5
2824 Male, age 61, right hemisphere 78.8
1806 Female, age 85, left hemisphere 78.1
1856 Female, age 91, right hemisphere 73.8
2286 Male, age 75, left hemisphere 64.9
2391 Female, age 94, left hemisphere 54.3
2732 Male, age 80, right hemisphere 42.2
Nucleus basalis of Meynert
nTPM: 55.7
2393 Male, age 80, right hemisphere 72.5
2821 Male, age 75, both hemispheres 56.2
2484 Female, age 94, left hemisphere 55.5
2569 Male, age 61, both hemispheres 38.5
Nucleus of the diagonal band
nTPM: 65.0
2775 Male, age 80, right hemisphere 76.3
1812 Female, age 91, both hemispheres 74.2
2195 Female, age 85, both hemispheres 71.8
2029 Male, age 61, right hemisphere 58.8
1979 Male, age 74, unknown 44.1
Putamen
nTPM: 71.2
1838 Male, age 80, right hemisphere 94.0
1829 Male, age 74, unknown 90.4
2466 Female, age 79, unknown 80.4
1937 Female, age 91, right hemisphere 70.5
2482 Female, age 94, left hemisphere 62.9
2489 Female, age 72, unknown 54.3
2647 Male, age 75, left hemisphere 46.3
Septal nuclei
nTPM: 58.3
1960 Male, age 74, unknown 71.7
2629 Female, age 94, right hemisphere 70.4
2031 Female, age 72, unknown 67.5
2009 Female, age 91, both hemispheres 58.0
2059 Female, age 85, both hemispheres 56.9
2394 Male, age 61, left hemisphere 42.4
2199 Male, age 80, right hemisphere 40.9
Stria terminalis, bed nucleus
nTPM: 54.2
1974 Female, age 91, both hemispheres 63.0
2486 Female, age 94, both hemispheres 58.2
2201 Male, age 74, unknown 41.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 87.9
Samples: 246

Max nTPM: 250.4
Min nTPM: 41.7
Std nTPM: 32.7
Median nTPM: 80.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 250.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 180.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 172.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 170.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 168.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 167.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 166.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 159.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 157.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 153.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 151.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 151.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 149.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 148.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 147.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 145.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 141.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 140.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 139.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 139.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 138.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 137.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 137.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 137.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 136.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 136.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 135.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 135.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 134.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 134.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 134.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 133.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 132.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 132.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 127.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 127.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 126.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 125.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 124.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 124.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 123.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 121.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 120.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 118.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 117.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 115.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 113.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 113.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 112.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 111.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 111.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 111.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 111.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 111.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 110.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 109.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 108.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 107.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 106.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 104.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 104.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 103.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 103.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 102.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 102.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 102.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 101.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 100.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 100.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 100.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 100.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 97.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 97.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 96.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 96.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 96.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 95.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 94.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 94.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 94.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 94.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 93.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 93.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 92.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 92.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 91.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 90.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 90.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 90.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 90.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 89.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 89.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 89.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 89.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 88.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 88.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 87.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 87.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 87.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 86.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 86.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 86.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 86.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 85.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 85.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 85.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 84.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 83.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 83.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 82.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 82.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 82.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 82.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 82.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 81.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 81.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 81.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 80.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 79.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 79.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 79.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 79.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 78.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 78.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 77.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 77.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 77.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 76.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 76.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 76.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 76.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 74.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 74.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 74.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 74.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 73.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 73.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 73.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 72.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 72.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 72.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 72.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 71.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 71.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 70.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 70.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 70.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 70.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 70.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 70.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 70.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 69.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 69.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 69.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 68.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 68.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 68.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 66.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 66.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 65.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 65.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 65.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 64.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 64.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 64.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 63.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 63.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 63.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 63.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 62.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 62.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 62.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 62.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 62.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 62.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 62.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 62.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 61.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 61.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 61.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 61.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 60.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 60.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 60.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 60.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 59.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 59.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 59.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 59.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 59.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 58.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 58.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 58.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 57.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 57.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 56.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 56.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 55.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 55.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 55.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 55.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 55.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 54.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 54.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 54.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 53.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 53.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 53.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 53.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 52.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 52.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 52.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 51.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 51.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 51.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 51.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 49.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 49.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 49.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 48.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 48.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 48.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 48.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 92.7
Samples: 246

Max nTPM: 172.0
Min nTPM: 38.9
Std nTPM: 30.5
Median nTPM: 89.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 172.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 171.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 167.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 167.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 163.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 161.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 157.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 154.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 153.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 153.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 153.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 151.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 149.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 148.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 147.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 142.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 140.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 139.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 139.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 139.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 139.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 135.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 135.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 133.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 133.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 132.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 130.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 130.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 129.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 129.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 129.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 129.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 128.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 127.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 127.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 126.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 126.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 126.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 126.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 125.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 125.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 125.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 124.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 124.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 123.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 123.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 122.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 121.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 120.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 119.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 119.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 119.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 118.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 118.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 117.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 117.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 117.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 117.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 116.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 115.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 115.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 115.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 115.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 115.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 114.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 114.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 114.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 113.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 112.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 112.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 112.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 110.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 110.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 110.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 110.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 109.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 109.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 108.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 108.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 108.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 106.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 106.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 105.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 105.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 104.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 103.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 103.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 102.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 101.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 101.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 101.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 100.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 100.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 100.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 100.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 99.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 99.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 99.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 99.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 98.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 97.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 97.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 96.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 96.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 96.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 96.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 95.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 95.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 95.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 94.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 94.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 93.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 92.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 92.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 92.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 92.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 91.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 91.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 91.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 90.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 90.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 90.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 90.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 89.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 89.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 89.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 88.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 88.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 88.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 87.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 86.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 85.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 85.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 85.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 85.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 84.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 83.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 83.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 83.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 83.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 83.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 82.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 82.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 82.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 82.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 82.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 82.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 81.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 81.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 81.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 81.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 80.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 79.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 79.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 77.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 77.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 77.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 77.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 76.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 76.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 76.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 76.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 76.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 76.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 75.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 74.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 74.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 74.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 72.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 71.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 71.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 71.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 70.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 69.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 69.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 69.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 69.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 69.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 68.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 68.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 68.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 68.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 68.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 67.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 67.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 67.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 66.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 66.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 66.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 65.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 65.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 64.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 64.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 63.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 63.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 62.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 62.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 62.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 61.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 61.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 61.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 60.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 59.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 59.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 59.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 58.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 58.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 58.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 58.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 58.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 58.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 58.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 58.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 58.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 56.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 56.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 56.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 55.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 55.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 55.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 54.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 54.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 53.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 53.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 52.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 52.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 52.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 51.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 51.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 51.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 50.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 50.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 50.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 49.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 49.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 49.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 47.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 47.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 47.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 47.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 45.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 42.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 42.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 38.9
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Brain - Putamen (basal ganglia)
Average nTPM: 86.7
Samples: 205

Max nTPM: 193.5
Min nTPM: 47.6
Std nTPM: 30.0
Median nTPM: 77.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 193.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 185.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 182.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 169.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 166.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 155.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 146.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 144.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 143.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 143.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 143.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 142.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 139.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 139.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 137.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 137.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 137.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 137.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 135.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 134.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 131.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 129.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 125.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 124.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 124.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 122.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 122.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 122.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 121.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 121.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 121.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 120.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 119.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 118.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 116.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 116.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 116.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 114.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 114.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 113.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 112.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 111.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 111.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 109.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 109.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 109.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 108.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 108.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 108.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 107.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 106.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 106.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 106.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 103.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 102.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 102.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 101.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 101.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 100.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 99.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 99.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 99.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 98.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 98.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 97.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 96.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 96.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 95.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 94.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 94.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 92.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 91.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 91.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 90.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 90.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 89.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 89.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 89.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 88.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 88.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 88.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 88.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 86.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 86.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 85.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 85.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 84.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 84.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 83.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 83.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 83.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 83.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 82.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 81.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 80.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 78.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 78.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 78.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 78.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 77.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 77.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 77.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 77.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 76.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 76.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 76.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 76.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 76.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 75.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 75.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 74.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 74.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 74.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 72.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 72.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 71.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 71.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 71.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 71.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 71.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 71.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 71.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 71.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 70.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 70.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 70.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 70.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 70.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 70.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 70.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 70.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 69.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 69.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 68.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 68.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 68.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 68.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 67.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 67.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 66.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 66.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 66.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 65.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 65.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 64.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 64.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 64.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 64.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 63.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 63.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 63.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 63.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 63.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 63.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 62.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 61.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 61.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 61.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 60.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 60.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 60.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 59.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 59.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 59.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 59.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 59.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 59.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 59.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 59.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 58.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 58.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 58.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 58.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 57.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 57.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 57.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 56.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 56.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 56.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 55.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 55.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 55.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 54.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 53.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 53.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 53.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 53.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 52.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 52.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 52.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 51.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 49.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 49.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 49.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 48.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 47.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

164.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 127.5
FF:10164-103B2 76 years, female 127.5
Nucleus accumbens
Scaled Tags Per Million: 106.5
FF:10037-101F1 23-56 years, mixed 106.5
Putamen
Scaled Tags Per Million: 164.7
FF:10176-103C5 60 years, female 164.7
Globus pallidus
Scaled Tags Per Million: 139.0
FF:10175-103C4 60 years, female 211.8
FF:10161-103A8 76 years, female 66.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.6
Pig sample Sample description nTPM
Caudate
nTPM: 39.4
Samples: 4

Max nTPM: 43.5
Min nTPM: 35.6
Sample A Female 38.4
Sample B Female 40.0
Sample C Male 43.5
Sample D Male 35.6
Putamen
nTPM: 44.6
Samples: 4

Max nTPM: 55.4
Min nTPM: 34.9
Sample A Female 34.9
Sample B Female 42.8
Sample C Male 55.4
Sample D Male 45.1
Septum
nTPM: 35.8
Samples: 4

Max nTPM: 38.3
Min nTPM: 31.6
Sample A Female 38.3
Sample B Female 37.1
Sample C Male 31.6
Sample D Male 36.1
Ventral pallidum
nTPM: 35.5
Samples: 4

Max nTPM: 38.1
Min nTPM: 30.4
Sample A Female 38.1
Sample B Female 37.3
Sample C Male 30.4
Sample D Male 36.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 134.7
Samples: 4

Max nTPM: 142.0
Min nTPM: 126.9
Sample A Male 126.9
Sample B Male 128.2
Sample C Female 141.5
Sample D Female 142.0
Septum
nTPM: 119.4
Samples: 4

Max nTPM: 131.3
Min nTPM: 108.5
Sample A Male 116.6
Sample B Male 131.3
Sample C Female 121.3
Sample D Female 108.5
Ventral forebrain
nTPM: 126.8
Samples: 4

Max nTPM: 139.9
Min nTPM: 119.9
Sample A Male 125.4
Sample B Male 119.9
Sample C Female 139.9
Sample D Female 121.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.6
69080733 Antisense, RP_050324_02_D02, Mouse strain C57BL/6J (56 days, male) 2.6
Pallidum
Expression energy: 1.7
69080733 Antisense, RP_050324_02_D02, Mouse strain C57BL/6J (56 days, male) 1.7

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