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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:81.9 nTPM
FANTOM5:90.7 Scaled Tags Per Million
Pig:67.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051300Antibody HPA054630
Glial cells MediumMedium
Neuronal cells -Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.9
Samples: 246

Max nTPM: 281.7
Min nTPM: 15.4
Std nTPM: 43.7
Median nTPM: 70.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 281.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 238.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 222.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 212.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 195.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 195.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 189.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 183.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 179.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 174.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 169.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 168.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 167.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 163.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 163.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 161.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 157.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 155.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 154.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 154.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 152.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 151.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 148.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 142.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 138.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 137.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 136.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 133.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 133.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 129.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 129.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 128.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 128.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 126.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 123.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 123.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 120.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 119.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 118.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 118.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 118.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 117.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 117.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 113.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 113.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 111.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 111.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 111.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 111.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 110.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 109.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 109.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 108.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 108.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 108.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 107.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 107.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 107.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 107.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 106.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 103.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 103.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 102.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 102.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 102.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 99.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 99.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 96.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 95.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 95.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 94.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 93.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 93.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 92.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 91.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 91.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 90.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 90.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 90.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 90.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 89.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 89.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 89.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 88.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 88.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 88.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 87.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 87.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 86.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 84.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 84.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 82.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 81.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 81.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 81.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 80.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 80.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 79.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 79.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 78.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 77.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 77.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 77.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 74.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 73.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 71.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 70.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 69.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 69.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 69.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 69.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 68.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 67.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 67.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 67.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 65.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 65.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 65.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 64.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 64.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 63.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 63.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 63.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 63.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 62.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 62.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 61.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 61.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 61.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 59.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 58.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 57.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 55.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 55.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 55.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 55.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 54.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 53.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 52.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 51.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 51.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 50.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 50.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 50.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 49.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 49.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 49.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 48.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 48.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 48.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 48.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 48.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 48.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 47.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 47.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 47.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 46.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 46.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 46.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 45.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 45.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 45.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 44.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 44.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 43.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 43.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 42.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 40.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 40.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 40.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 39.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 37.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 37.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 36.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 36.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 36.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 35.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 35.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 35.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 35.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 35.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 34.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 32.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 32.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 29.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 28.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 26.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 26.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 26.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 25.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 24.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 21.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 20.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 15.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

90.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 90.7
FF:10164-103B2 76 years, female 90.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.8
Pig sample Sample description nTPM
Caudate
nTPM: 67.8
Samples: 4

Max nTPM: 75.7
Min nTPM: 58.0
Sample A Female 58.0
Sample B Female 63.6
Sample C Male 75.7
Sample D Male 73.9

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