HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:6.2 nTPM
HPA Brain:20.4 nTPM
GTEx:6.2 nTPM
FANTOM5:66.1 Scaled Tags Per Million
Pig:26.0 nTPM
Mouse:13.7 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029957
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.2
1898 Male, age 80, left hemisphere 26.6
1855 Male, age 76, left hemisphere 23.3
2621 Female, age 67, right hemisphere 20.7
2148 Female, age 91, left hemisphere 13.3
1911 Female, age 85, right hemisphere 12.8
2529 Female, age 94, left hemisphere 6.4
Dentate gyrus
nTPM: 15.7
2010 Male, age 76, both hemispheres 26.9
2530 Female, age 94, left hemisphere 18.9
1927 Female, age 91, both hemispheres 17.6
2246 Female, age 85, both hemispheres 15.3
2528 Male, age 74, both hemispheres 8.6
2531 Female, age 67, both hemispheres 6.7
Entorhinal gyrus
nTPM: 6.2
1938 Female, age 85, left hemisphere 9.6
2764 Male, age 80, right hemisphere 8.4
2613 Female, age 94, left hemisphere 5.8
2117 Female, age 91, right hemisphere 4.8
1787 Male, age 76, left hemisphere 4.7
2686 Male, age 75, right hemisphere 3.8
Hippocampus, CA1
nTPM: 20.4
2749 Male, age 80, left hemisphere 40.7
2527 Male, age 74, both hemispheres 22.4
1873 Female, age 85, both hemispheres 20.1
2045 Male, age 76, both hemispheres 10.1
2082 Female, age 91, right hemisphere 8.5
Hippocampus, CA2
nTPM: 16.7
1963 Male, age 80, left hemisphere 29.0
1892 Male, age 76, both hemispheres 26.6
2249 Male, age 74, both hemispheres 17.8
2113 Female, age 91, right hemisphere 11.4
2437 Female, age 94, left hemisphere 7.6
1940 Female, age 85, left hemisphere 7.5
Hippocampus, CA3
nTPM: 14.9
1867 Male, age 76, both hemispheres 21.5
2137 Male, age 80, left hemisphere 21.2
2436 Male, age 74, both hemispheres 18.7
2861 Female, age 67, both hemispheres 14.9
1891 Female, age 85, both hemispheres 7.5
2620 Female, age 94, left hemisphere 5.5
Parahippocampal cortex
nTPM: 7.3
2245 Female, age 91, both hemispheres 11.2
1850 Male, age 80, both hemispheres 10.7
2018 Male, age 76, both hemispheres 9.1
1933 Female, age 85, both hemispheres 8.2
2250 Female, age 67, right hemisphere 7.4
2622 Female, age 67, right hemisphere 6.7
2532 Female, age 72, left hemisphere 5.3
1990 Female, age 91, right hemisphere 5.1
2692 Male, age 74, both hemispheres 4.9
2693 Female, age 94, both hemispheres 4.5
Perirhinal gyrus
nTPM: 6.9
1847 Female, age 91, left hemisphere 10.1
2848 Male, age 76, right hemisphere 7.1
1794 Male, age 80, right hemisphere 6.7
1841 Female, age 85, right hemisphere 6.4
2521 Female, age 94, right hemisphere 4.4
Subiculum
nTPM: 6.9
2042 Male, age 76, both hemispheres 11.9
1901 Male, age 80, both hemispheres 9.5
1977 Female, age 85, both hemispheres 6.2
2729 Female, age 91, right hemisphere 6.2
2438 Female, age 94, left hemisphere 3.9
2619 Male, age 74, both hemispheres 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.2
Samples: 197

Max nTPM: 29.2
Min nTPM: 0.1
Std nTPM: 6.2
Median nTPM: 3.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 29.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 26.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 24.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 24.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 23.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 20.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 20.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 19.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 18.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 66.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.1
FF:10169-103B7 60 years, female 113.2
FF:10153-102I9 76 years, female 19.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.0
Pig sample Sample description nTPM
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 12.2
Min nTPM: 7.5
Sample A Female 10.1
Sample B Female 7.5
Sample C Male 12.2
Sample D Male 9.5
Dorsal hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 40.2
Min nTPM: 20.0
Sample A Female 40.2
Sample B Female 23.3
Sample C Male 20.0
Sample D Male 20.5
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.4
Min nTPM: 3.4
Sample A Female 5.0
Sample B Female 3.4
Sample C Male 5.4
Sample D Male 3.8
Ventral hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 35.0
Min nTPM: 11.7
Sample A Female 35.0
Sample B Female 11.7
Sample C Male 12.7
Sample D Male 30.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.7
Sample A Male 11.7
Sample B Male 13.7
Sample C Female 14.6
Sample D Female 14.8
Hippocampal formation
nTPM: 9.2
Samples: 4

Max nTPM: 11.3
Min nTPM: 7.1
Sample A Male 11.3
Sample B Male 9.5
Sample C Female 7.1
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69980352 Antisense, RP_050512_04_D05, Mouse strain C57BL/6J (56 days, male) 1.1

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